RNA–Protein interactions for RNA: ENST00000440118.1

SHROOM1-204, Transcript of shroom family member 1, humanhuman

TSL 2

Gene SHROOM1, Length 1,080 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHROOM1-204ENST00000440118 CDK5R1Q15078 307 aa16.07■□□□□ 0.16
SHROOM1-204ENST00000440118 C2orf68Q2NKX9 166 aa16.07■□□□□ 0.16
SHROOM1-204ENST00000440118 CCDC58Q4VC31 144 aa16.07■□□□□ 0.16
SHROOM1-204ENST00000440118 KRBOX4Q5JUW0 171 aa16.07■□□□□ 0.16
SHROOM1-204ENST00000440118 PRAMEF5Q5TYX0 476 aa16.07■□□□□ 0.16
SHROOM1-204ENST00000440118 OR52W1Q6IF63 320 aa16.07■□□□□ 0.16
SHROOM1-204ENST00000440118 C11orf88Q6PI97 169 aa16.07■□□□□ 0.16
SHROOM1-204ENST00000440118 RNF144BQ7Z419 303 aa16.07■□□□□ 0.16
SHROOM1-204ENST00000440118 TNFAIP8L1Q8WVP5 186 aa16.07■□□□□ 0.16
SHROOM1-204ENST00000440118 ZNF649Q9BS31 505 aa16.07■□□□□ 0.16
SHROOM1-204ENST00000440118 TAS2R4Q9NYW5 299 aa16.07■□□□□ 0.16
SHROOM1-204ENST00000440118 TCF19Q9Y242 345 aa16.07■□□□□ 0.16
SHROOM1-204ENST00000440118 SIGLEC9Q9Y336 463 aa16.07■□□□□ 0.16
SHROOM1-204ENST00000440118 EXOSC1Q9Y3B2 195 aaKnown RBP16.07■□□□□ 0.16
SHROOM1-204ENST00000440118 FAM90A8PA6NJQ4 464 aa16.06■□□□□ 0.16
SHROOM1-204ENST00000440118 VGLL3A8MV65 326 aa16.06■□□□□ 0.16
SHROOM1-204ENST00000440118 H3BUI4 141 aa16.06■□□□□ 0.16
SHROOM1-204ENST00000440118 CHST1O43916 411 aa16.06■□□□□ 0.16
SHROOM1-204ENST00000440118 PEX14O75381 377 aa16.06■□□□□ 0.16
SHROOM1-204ENST00000440118 PTGFRP43088 359 aa16.06■□□□□ 0.16
SHROOM1-204ENST00000440118 ETV1P50549 477 aa16.06■□□□□ 0.16
SHROOM1-204ENST00000440118 RAB13P51153 203 aa16.06■□□□□ 0.16
SHROOM1-204ENST00000440118 ZP1P60852 638 aa16.06■□□□□ 0.16
SHROOM1-204ENST00000440118 RSU1Q15404 277 aa16.06■□□□□ 0.16
SHROOM1-204ENST00000440118 MINOS1Q5TGZ0 78 aa16.06■□□□□ 0.16
SHROOM1-204ENST00000440118 OR2G6Q5TZ20 316 aa16.06■□□□□ 0.16
SHROOM1-204ENST00000440118 TMEM219Q86XT9 240 aa16.06■□□□□ 0.16
SHROOM1-204ENST00000440118 DHRSXQ8N5I4 330 aa16.06■□□□□ 0.16
SHROOM1-204ENST00000440118 PACRGLQ8N7B6 248 aa16.06■□□□□ 0.16
SHROOM1-204ENST00000440118 MINOS1-NBL1R4GNA1 71 aa16.06■□□□□ 0.16
SHROOM1-204ENST00000440118 ODAMA1E959 279 aa16.05■□□□□ 0.16
SHROOM1-204ENST00000440118 FAM172BPA6NC97 362 aa16.05■□□□□ 0.16
SHROOM1-204ENST00000440118 H0YJX3 145 aa16.05■□□□□ 0.16
SHROOM1-204ENST00000440118 VSIG10L2P0DP72 767 aa16.05■□□□□ 0.16
SHROOM1-204ENST00000440118 CDK2P24941 298 aa16.05■□□□□ 0.16
SHROOM1-204ENST00000440118 HTR1DP28221 377 aa16.05■□□□□ 0.16
SHROOM1-204ENST00000440118 GLIPR1P48060 266 aa16.05■□□□□ 0.16
SHROOM1-204ENST00000440118 ARHGDIBP52566 201 aa16.05■□□□□ 0.16
SHROOM1-204ENST00000440118 PAN3Q58A45 887 aaKnown RBP16.05■□□□□ 0.16
SHROOM1-204ENST00000440118 DYNAPQ8N1N2 210 aa16.05■□□□□ 0.16
SHROOM1-204ENST00000440118 OR4D6Q8NGJ1 314 aa16.05■□□□□ 0.16
SHROOM1-204ENST00000440118 OR51A2Q8NGJ7 313 aa16.05■□□□□ 0.16
SHROOM1-204ENST00000440118 TMEM106AQ96A25 262 aa16.05■□□□□ 0.16
SHROOM1-204ENST00000440118 S100A13Q99584 98 aa16.05■□□□□ 0.16
SHROOM1-204ENST00000440118 DIMT1Q9UNQ2 313 aaKnown RBP16.05■□□□□ 0.16
SHROOM1-204ENST00000440118 A0A0G2JK05 382 aa16.04■□□□□ 0.16
SHROOM1-204ENST00000440118 SLC33A1O00400 549 aaPredicted RBP16.04■□□□□ 0.16
SHROOM1-204ENST00000440118 GABRPO00591 440 aa16.04■□□□□ 0.16
SHROOM1-204ENST00000440118 GLP1RP43220 463 aa16.04■□□□□ 0.16
SHROOM1-204ENST00000440118 KIR2DS4P43632 304 aa16.04■□□□□ 0.16
SHROOM1-204ENST00000440118 HERPUD1Q15011 391 aa16.04■□□□□ 0.16
SHROOM1-204ENST00000440118 XAF1Q6GPH4 301 aa16.04■□□□□ 0.16
SHROOM1-204ENST00000440118 KLHDC1Q8N7A1 406 aa16.04■□□□□ 0.16
SHROOM1-204ENST00000440118 PXT1Q8NFP0 134 aa16.04■□□□□ 0.16
SHROOM1-204ENST00000440118 ZNF596Q8TC21 504 aa16.04■□□□□ 0.16
SHROOM1-204ENST00000440118 RGP1Q92546 391 aaPredicted RBP16.04■□□□□ 0.16
SHROOM1-204ENST00000440118 SMIM19Q96E16 107 aa16.04■□□□□ 0.16
SHROOM1-204ENST00000440118 TMEM80Q96HE8 168 aa16.04■□□□□ 0.16
SHROOM1-204ENST00000440118 CDCA4Q9BXL8 241 aa16.04■□□□□ 0.16
SHROOM1-204ENST00000440118 TAS2R3Q9NYW6 316 aa16.04■□□□□ 0.16
SHROOM1-204ENST00000440118 CKLFQ9UBR5 152 aa16.04■□□□□ 0.16
SHROOM1-204ENST00000440118 TOR1AO14656 332 aa16.03■□□□□ 0.16
SHROOM1-204ENST00000440118 HTR3BO95264 441 aa16.03■□□□□ 0.16
SHROOM1-204ENST00000440118 CSN2P05814 226 aa16.03■□□□□ 0.16
SHROOM1-204ENST00000440118 CSF1P09603 554 aa16.03■□□□□ 0.16
SHROOM1-204ENST00000440118 LMO1P25800 156 aa16.03■□□□□ 0.16
SHROOM1-204ENST00000440118 EFNB2P52799 333 aa16.03■□□□□ 0.16
SHROOM1-204ENST00000440118 DDI2Q5TDH0 399 aa16.03■□□□□ 0.16
SHROOM1-204ENST00000440118 Q6P435 159 aa16.03■□□□□ 0.16
SHROOM1-204ENST00000440118 RTN4RL2Q86UN3 420 aa16.03■□□□□ 0.16
SHROOM1-204ENST00000440118 ABHD12Q8N2K0 398 aa16.03■□□□□ 0.16
SHROOM1-204ENST00000440118 C11orf44Q8N8P7 122 aa16.03■□□□□ 0.16
SHROOM1-204ENST00000440118 OR10K1Q8NGX5 313 aa16.03■□□□□ 0.16
SHROOM1-204ENST00000440118 PIFOQ8TCI5 191 aa16.03■□□□□ 0.16
SHROOM1-204ENST00000440118 CAPSLQ8WWF8 208 aa16.03■□□□□ 0.16
SHROOM1-204ENST00000440118 VCXQ9H320 206 aa16.03■□□□□ 0.16
SHROOM1-204ENST00000440118 BABAM2Q9NXR7 383 aa16.03■□□□□ 0.16
SHROOM1-204ENST00000440118 OR6C3Q9NZP0 311 aa16.03■□□□□ 0.16
SHROOM1-204ENST00000440118 ZNF281Q9Y2X9 895 aa16.03■□□□□ 0.16
SHROOM1-204ENST00000440118 VWFP04275 2813 aa16.03■□□□□ 0.16
SHROOM1-204ENST00000440118 WIPF1O43516 503 aa16.02■□□□□ 0.16
SHROOM1-204ENST00000440118 MMP23AO75900 390 aa16.02■□□□□ 0.16
SHROOM1-204ENST00000440118 TSPAN15O95858 294 aa16.02■□□□□ 0.16
SHROOM1-204ENST00000440118 CSTBP04080 98 aaKnown RBP16.02■□□□□ 0.16
SHROOM1-204ENST00000440118 NFYBP25208 207 aa16.02■□□□□ 0.16
SHROOM1-204ENST00000440118 RBM39Q14498 530 aaKnown RBP16.02■□□□□ 0.16
SHROOM1-204ENST00000440118 CRIP3Q6Q6R5 217 aa16.02■□□□□ 0.16
SHROOM1-204ENST00000440118 HEPN1Q6WQI6 88 aa16.02■□□□□ 0.16
SHROOM1-204ENST00000440118 C8orf59Q8N0T1 100 aaPredicted RBP16.02■□□□□ 0.16
SHROOM1-204ENST00000440118 FAM110DQ8TAY7 271 aaPredicted RBP16.02■□□□□ 0.16
SHROOM1-204ENST00000440118 TMEM138Q9NPI0 162 aa16.02■□□□□ 0.16
SHROOM1-204ENST00000440118 ING4Q9UNL4 249 aa16.02■□□□□ 0.16
SHROOM1-204ENST00000440118 FOXJ3Q9UPW0 622 aa16.02■□□□□ 0.16
SHROOM1-204ENST00000440118 NOTCH1P46531 2555 aa16.01■□□□□ 0.15
SHROOM1-204ENST00000440118 MEIKINA0A087WXM9 373 aa16.01■□□□□ 0.15
SHROOM1-204ENST00000440118 A6NDX4 124 aa16.01■□□□□ 0.15
SHROOM1-204ENST00000440118 ZNF729A6NN14 1252 aaPredicted RBP16.01■□□□□ 0.15
SHROOM1-204ENST00000440118 BDKRB2P30411 391 aa16.01■□□□□ 0.15
SHROOM1-204ENST00000440118 ZNF93P35789 620 aaPredicted RBP16.01■□□□□ 0.15
SHROOM1-204ENST00000440118 OR3A4PP47883 348 aa16.01■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 51.8 ms