RNA–Protein interactions for RNA: ENST00000439977.6

HERPUD1-204, Transcript of homocysteine inducible ER protein with ubiquitin like domain 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene HERPUD1, Length 2,946 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERPUD1-204ENST00000439977 SNCAP37840 140 aa11.67□□□□□ -0.54
HERPUD1-204ENST00000439977 SNRPEP62304 92 aaKnown RBP11.67□□□□□ -0.54
HERPUD1-204ENST00000439977 ARF1P84077 181 aaKnown RBP11.67□□□□□ -0.54
HERPUD1-204ENST00000439977 AWAT1Q58HT5 328 aa11.67□□□□□ -0.54
HERPUD1-204ENST00000439977 EXTL1Q92935 676 aa11.67□□□□□ -0.54
HERPUD1-204ENST00000439977 MOB3AQ96BX8 217 aa11.67□□□□□ -0.54
HERPUD1-204ENST00000439977 PRRG4Q9BZD6 226 aa11.67□□□□□ -0.54
HERPUD1-204ENST00000439977 FGF23Q9GZV9 251 aaPredicted RBP11.67□□□□□ -0.54
HERPUD1-204ENST00000439977 NOSIPQ9Y314 301 aaKnown RBP11.67□□□□□ -0.54
HERPUD1-204ENST00000439977 UBE2J1Q9Y385 318 aaPredicted RBP11.67□□□□□ -0.54
HERPUD1-204ENST00000439977 DNAJC13O75165 2243 aa11.67□□□□□ -0.54
HERPUD1-204ENST00000439977 DSPP15924 2871 aaKnown RBP11.67□□□□□ -0.54
HERPUD1-204ENST00000439977 BORCS7-ASMTA0A0B4J1R7 106 aa11.66□□□□□ -0.54
HERPUD1-204ENST00000439977 ZNF503-AS2A6NEH8 195 aa11.66□□□□□ -0.54
HERPUD1-204ENST00000439977 CDRT15L2A8MXV6 281 aa11.66□□□□□ -0.54
HERPUD1-204ENST00000439977 HSD17B6O14756 317 aa11.66□□□□□ -0.54
HERPUD1-204ENST00000439977 MPPED1O15442 326 aa11.66□□□□□ -0.54
HERPUD1-204ENST00000439977 SSSCA1O60232 199 aa11.66□□□□□ -0.54
HERPUD1-204ENST00000439977 MRPL33O75394 65 aaKnown RBP11.66□□□□□ -0.54
HERPUD1-204ENST00000439977 CST7O76096 145 aa11.66□□□□□ -0.54
HERPUD1-204ENST00000439977 NGFP01138 241 aa11.66□□□□□ -0.54
HERPUD1-204ENST00000439977 CYB561P49447 251 aa11.66□□□□□ -0.54
HERPUD1-204ENST00000439977 SHEQ5VZ18 495 aa11.66□□□□□ -0.54
HERPUD1-204ENST00000439977 ADGRG7Q96K78 797 aa11.66□□□□□ -0.54
HERPUD1-204ENST00000439977 RARRES2Q99969 163 aa11.66□□□□□ -0.54
HERPUD1-204ENST00000439977 USB1Q9BQ65 265 aaKnown RBP11.66□□□□□ -0.54
HERPUD1-204ENST00000439977 SUCNR1Q9BXA5 334 aa11.66□□□□□ -0.54
HERPUD1-204ENST00000439977 RGCCQ9H4X1 137 aa11.66□□□□□ -0.54
HERPUD1-204ENST00000439977 IGHV3-64DA0A0J9YX35 117 aa11.66□□□□□ -0.54
HERPUD1-204ENST00000439977 FAM166BA8MTA8 275 aa11.66□□□□□ -0.54
HERPUD1-204ENST00000439977 GPR137BO60478 399 aa11.66□□□□□ -0.54
HERPUD1-204ENST00000439977 DANCRP0C864 163 aa11.66□□□□□ -0.54
HERPUD1-204ENST00000439977 ZNF44P15621 663 aa11.66□□□□□ -0.54
HERPUD1-204ENST00000439977 C3AR1Q16581 482 aa11.66□□□□□ -0.54
HERPUD1-204ENST00000439977 ASCL4Q6XD76 172 aa11.66□□□□□ -0.54
HERPUD1-204ENST00000439977 TBC1D26Q86UD7 250 aa11.66□□□□□ -0.54
HERPUD1-204ENST00000439977 TUSC5Q8IXB3 177 aa11.66□□□□□ -0.54
HERPUD1-204ENST00000439977 ZFP62Q8NB50 900 aaPredicted RBP11.66□□□□□ -0.54
HERPUD1-204ENST00000439977 NTNG2Q96CW9 530 aa11.66□□□□□ -0.54
HERPUD1-204ENST00000439977 C19orf12Q9NSK7 152 aa11.66□□□□□ -0.54
HERPUD1-204ENST00000439977 IGKV1D-13A0A0B4J2D9 117 aa11.66□□□□□ -0.54
HERPUD1-204ENST00000439977 GLAP06280 429 aa11.66□□□□□ -0.54
HERPUD1-204ENST00000439977 MMP7P09237 267 aaPredicted RBP11.66□□□□□ -0.54
HERPUD1-204ENST00000439977 IGKV1-13P0DP09 117 aa11.66□□□□□ -0.54
HERPUD1-204ENST00000439977 GNMTQ14749 295 aa11.66□□□□□ -0.54
HERPUD1-204ENST00000439977 ZNF818PQ6ZRF7 136 aa11.66□□□□□ -0.54
HERPUD1-204ENST00000439977 KCNE4Q8WWG9 221 aa11.66□□□□□ -0.54
HERPUD1-204ENST00000439977 BIN3Q9NQY0 253 aa11.66□□□□□ -0.54
HERPUD1-204ENST00000439977 LRFN1Q9P244 771 aa11.66□□□□□ -0.54
HERPUD1-204ENST00000439977 TRAV39A0A0B4J263 110 aa11.65□□□□□ -0.54
HERPUD1-204ENST00000439977 C7orf77A4D0Y5 90 aa11.65□□□□□ -0.54
HERPUD1-204ENST00000439977 A6NLC8 198 aa11.65□□□□□ -0.54
HERPUD1-204ENST00000439977 P2RY1P47900 373 aa11.65□□□□□ -0.54
HERPUD1-204ENST00000439977 CCL20P78556 96 aa11.65□□□□□ -0.54
HERPUD1-204ENST00000439977 EWSR1Q01844 656 aaKnown RBP eCLIP11.65□□□□□ -0.54
HERPUD1-204ENST00000439977 OR8B8Q15620 311 aa11.65□□□□□ -0.54
HERPUD1-204ENST00000439977 IZUMO4Q1ZYL8 232 aa11.65□□□□□ -0.54
HERPUD1-204ENST00000439977 ZNF695Q8IW36 515 aa11.65□□□□□ -0.54
HERPUD1-204ENST00000439977 GAPTQ8N292 157 aa11.65□□□□□ -0.54
HERPUD1-204ENST00000439977 SMCO4Q9NRQ5 59 aa11.65□□□□□ -0.54
HERPUD1-204ENST00000439977 PLA2G3Q9NZ20 509 aa11.65□□□□□ -0.54
HERPUD1-204ENST00000439977 LUZP4Q9P127 313 aa11.65□□□□□ -0.54
HERPUD1-204ENST00000439977 FBXO9Q9UK97 447 aaPredicted RBP11.65□□□□□ -0.54
HERPUD1-204ENST00000439977 HS3ST1O14792 307 aa11.65□□□□□ -0.54
HERPUD1-204ENST00000439977 ADAM20O43506 726 aa11.65□□□□□ -0.54
HERPUD1-204ENST00000439977 PRDX4Q13162 271 aa11.65□□□□□ -0.54
HERPUD1-204ENST00000439977 UBALD1Q8TB05 177 aa11.65□□□□□ -0.54
HERPUD1-204ENST00000439977 CT55Q8WUE5 264 aa11.65□□□□□ -0.54
HERPUD1-204ENST00000439977 THOC3Q96J01 351 aaKnown RBP11.65□□□□□ -0.54
HERPUD1-204ENST00000439977 SIGLEC12Q96PQ1 595 aa11.65□□□□□ -0.54
HERPUD1-204ENST00000439977 hCG_1809904A0A1W2PP81 198 aa11.64□□□□□ -0.55
HERPUD1-204ENST00000439977 A0A1W2PPH5 198 aa11.64□□□□□ -0.55
HERPUD1-204ENST00000439977 A0A1W2PR64 198 aa11.64□□□□□ -0.55
HERPUD1-204ENST00000439977 A0A1W2PRV1 198 aa11.64□□□□□ -0.55
HERPUD1-204ENST00000439977 ATXN7O15265 892 aaPredicted RBP11.64□□□□□ -0.55
HERPUD1-204ENST00000439977 HOXA1P49639 335 aaPredicted RBP11.64□□□□□ -0.55
HERPUD1-204ENST00000439977 PCBD1P61457 104 aa11.64□□□□□ -0.55
HERPUD1-204ENST00000439977 HABP2Q14520 560 aaPredicted RBP11.64□□□□□ -0.55
HERPUD1-204ENST00000439977 ABLIM2Q6H8Q1 611 aa11.64□□□□□ -0.55
HERPUD1-204ENST00000439977 CCDC54Q8NEL0 328 aa11.64□□□□□ -0.55
HERPUD1-204ENST00000439977 SFT2D1Q8WV19 159 aa11.64□□□□□ -0.55
HERPUD1-204ENST00000439977 HPSE2Q8WWQ2 592 aa11.64□□□□□ -0.55
HERPUD1-204ENST00000439977 ZNF552Q9H707 407 aaPredicted RBP11.64□□□□□ -0.55
HERPUD1-204ENST00000439977 MTCH1Q9NZJ7 389 aa11.64□□□□□ -0.55
HERPUD1-204ENST00000439977 A0A1W2PPE3 182 aa11.64□□□□□ -0.55
HERPUD1-204ENST00000439977 IGSF23A1L1A6 192 aa11.64□□□□□ -0.55
HERPUD1-204ENST00000439977 ZNF732B4DXR9 585 aa11.64□□□□□ -0.55
HERPUD1-204ENST00000439977 UMAD1C9J7I0 102 aa11.64□□□□□ -0.55
HERPUD1-204ENST00000439977 H3BP45 60 aa11.64□□□□□ -0.55
HERPUD1-204ENST00000439977 SYNGR1O43759 233 aa11.64□□□□□ -0.55
HERPUD1-204ENST00000439977 LILRA1O75019 489 aa11.64□□□□□ -0.55
HERPUD1-204ENST00000439977 NKX2-1P43699 371 aaPredicted RBP11.64□□□□□ -0.55
HERPUD1-204ENST00000439977 ZXDAP98168 799 aa11.64□□□□□ -0.55
HERPUD1-204ENST00000439977 HERPUD1Q15011 391 aa11.64□□□□□ -0.55
HERPUD1-204ENST00000439977 MYPOPQ86VE0 399 aaPredicted RBP11.64□□□□□ -0.55
HERPUD1-204ENST00000439977 C17orf78Q8N4C9 275 aa11.64□□□□□ -0.55
HERPUD1-204ENST00000439977 FAM24BQ8N5W8 94 aa11.64□□□□□ -0.55
HERPUD1-204ENST00000439977 OR2C3Q8N628 320 aa11.64□□□□□ -0.55
HERPUD1-204ENST00000439977 ZNF565Q8N9K5 539 aa11.64□□□□□ -0.55
HERPUD1-204ENST00000439977 RDH5Q92781 318 aa11.64□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 57 ms