RNA–Protein interactions for RNA: ENST00000438773.2

TRAPPC9-202, Transcript of trafficking protein particle complex 9, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRAPPC9, Length 4,297 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC9-202ENST00000438773 UBALD1Q8TB05 177 aa10.08□□□□□ -0.8
TRAPPC9-202ENST00000438773 CACNA1AO00555 2505 aa10.08□□□□□ -0.8
TRAPPC9-202ENST00000438773 IGLV3-32A0A0A0MS00 114 aa10.08□□□□□ -0.8
TRAPPC9-202ENST00000438773 NHLH1Q02575 133 aa10.08□□□□□ -0.8
TRAPPC9-202ENST00000438773 MDP1Q86V88 176 aa10.08□□□□□ -0.8
TRAPPC9-202ENST00000438773 FAM58AQ8N1B3 248 aa10.08□□□□□ -0.8
TRAPPC9-202ENST00000438773 NOTCH3Q9UM47 2321 aa10.08□□□□□ -0.8
TRAPPC9-202ENST00000438773 ATXN7O15265 892 aaPredicted RBP10.08□□□□□ -0.8
TRAPPC9-202ENST00000438773 TPPPO94811 219 aa10.08□□□□□ -0.8
TRAPPC9-202ENST00000438773 LY86O95711 162 aa10.08□□□□□ -0.8
TRAPPC9-202ENST00000438773 ARG1P05089 322 aa10.08□□□□□ -0.8
TRAPPC9-202ENST00000438773 RPL23AP62750 156 aaKnown RBP10.08□□□□□ -0.8
TRAPPC9-202ENST00000438773 ZNF92Q03936 586 aa10.08□□□□□ -0.8
TRAPPC9-202ENST00000438773 PPP1R1AQ13522 171 aa10.08□□□□□ -0.8
TRAPPC9-202ENST00000438773 ZNF626Q68DY1 528 aa10.08□□□□□ -0.8
TRAPPC9-202ENST00000438773 FAM214BQ7L5A3 538 aa10.08□□□□□ -0.8
TRAPPC9-202ENST00000438773 NUFIP2Q7Z417 695 aaKnown RBP10.08□□□□□ -0.8
TRAPPC9-202ENST00000438773 OR2Z1Q8NG97 314 aa10.08□□□□□ -0.8
TRAPPC9-202ENST00000438773 GPX8Q8TED1 209 aa10.08□□□□□ -0.8
TRAPPC9-202ENST00000438773 RIMS4Q9H426 269 aaPredicted RBP10.08□□□□□ -0.8
TRAPPC9-202ENST00000438773 FAM212BQ9NTI7 297 aaPredicted RBP10.08□□□□□ -0.8
TRAPPC9-202ENST00000438773 PRSS50Q9UI38 385 aa10.08□□□□□ -0.8
TRAPPC9-202ENST00000438773 STARD10Q9Y365 291 aa10.08□□□□□ -0.8
TRAPPC9-202ENST00000438773 MPC1Q9Y5U8 109 aa10.08□□□□□ -0.8
TRAPPC9-202ENST00000438773 OR5B21A6NL26 309 aa10.07□□□□□ -0.8
TRAPPC9-202ENST00000438773 SOX15O60248 233 aa10.07□□□□□ -0.8
TRAPPC9-202ENST00000438773 FAM24BQ8N5W8 94 aa10.07□□□□□ -0.8
TRAPPC9-202ENST00000438773 PRR7Q8TB68 274 aa10.07□□□□□ -0.8
TRAPPC9-202ENST00000438773 MRPS24Q96EL2 167 aaKnown RBP10.07□□□□□ -0.8
TRAPPC9-202ENST00000438773 TMPRSS13Q9BYE2 586 aa10.07□□□□□ -0.8
TRAPPC9-202ENST00000438773 EGLN1Q9GZT9 426 aa10.07□□□□□ -0.8
TRAPPC9-202ENST00000438773 DEPPQ9NTK1 212 aa10.07□□□□□ -0.8
TRAPPC9-202ENST00000438773 OPN4Q9UHM6 478 aa10.07□□□□□ -0.8
TRAPPC9-202ENST00000438773 RNF212BA8MTL3 300 aa10.07□□□□□ -0.8
TRAPPC9-202ENST00000438773 SPRY3O43610 288 aa10.07□□□□□ -0.8
TRAPPC9-202ENST00000438773 ACTL6BO94805 426 aa10.07□□□□□ -0.8
TRAPPC9-202ENST00000438773 SCAF4O95104 1147 aaKnown RBP10.07□□□□□ -0.8
TRAPPC9-202ENST00000438773 C9orf152Q5JTZ5 239 aa10.07□□□□□ -0.8
TRAPPC9-202ENST00000438773 SHEQ5VZ18 495 aa10.07□□□□□ -0.8
TRAPPC9-202ENST00000438773 BVESQ8NE79 360 aa10.07□□□□□ -0.8
TRAPPC9-202ENST00000438773 OR13G1Q8NGZ3 307 aa10.07□□□□□ -0.8
TRAPPC9-202ENST00000438773 FAM234AQ9H0X4 552 aa10.07□□□□□ -0.8
TRAPPC9-202ENST00000438773 NDRG3Q9UGV2 375 aa10.07□□□□□ -0.8
TRAPPC9-202ENST00000438773 EYSQ5T1H1 3165 aa10.07□□□□□ -0.8
TRAPPC9-202ENST00000438773 GEMIN2O14893 280 aaKnown RBP10.07□□□□□ -0.8
TRAPPC9-202ENST00000438773 NFYBP25208 207 aa10.07□□□□□ -0.8
TRAPPC9-202ENST00000438773 CHATP28329 748 aa10.07□□□□□ -0.8
TRAPPC9-202ENST00000438773 SNAI3Q3KNW1 292 aa10.07□□□□□ -0.8
TRAPPC9-202ENST00000438773 C10orf128Q5T292 105 aa10.07□□□□□ -0.8
TRAPPC9-202ENST00000438773 ZDHHC22Q8N966 263 aa10.07□□□□□ -0.8
TRAPPC9-202ENST00000438773 PECRQ9BY49 303 aa10.07□□□□□ -0.8
TRAPPC9-202ENST00000438773 MRPL13Q9BYD1 178 aaKnown RBP10.07□□□□□ -0.8
TRAPPC9-202ENST00000438773 PLCE1Q9P212 2302 aa10.07□□□□□ -0.8
TRAPPC9-202ENST00000438773 LRRC30A6NM36 301 aa10.07□□□□□ -0.8
TRAPPC9-202ENST00000438773 A8MXK9 166 aa10.07□□□□□ -0.8
TRAPPC9-202ENST00000438773 UMAD1C9J7I0 102 aa10.07□□□□□ -0.8
TRAPPC9-202ENST00000438773 ADAM10O14672 748 aa10.07□□□□□ -0.8
TRAPPC9-202ENST00000438773 NDUFB7P17568 137 aa10.07□□□□□ -0.8
TRAPPC9-202ENST00000438773 MSMO1Q15800 293 aa10.07□□□□□ -0.8
TRAPPC9-202ENST00000438773 MRPL41Q8IXM3 137 aaKnown RBP10.07□□□□□ -0.8
TRAPPC9-202ENST00000438773 OR5AP2Q8NGF4 316 aa10.07□□□□□ -0.8
TRAPPC9-202ENST00000438773 ZNF837Q96EG3 531 aaPredicted RBP10.07□□□□□ -0.8
TRAPPC9-202ENST00000438773 RHOFQ9HBH0 211 aa10.07□□□□□ -0.8
TRAPPC9-202ENST00000438773 CDX4O14627 284 aaPredicted RBP10.06□□□□□ -0.8
TRAPPC9-202ENST00000438773 GPR137BO60478 399 aa10.06□□□□□ -0.8
TRAPPC9-202ENST00000438773 RAB11AP62491 216 aa10.06□□□□□ -0.8
TRAPPC9-202ENST00000438773 C1orf100Q5SVJ3 147 aa10.06□□□□□ -0.8
TRAPPC9-202ENST00000438773 H1FXQ92522 213 aaKnown RBP10.06□□□□□ -0.8
TRAPPC9-202ENST00000438773 SLC25A28Q96A46 364 aa10.06□□□□□ -0.8
TRAPPC9-202ENST00000438773 PRO1933Q9H354 126 aa10.06□□□□□ -0.8
TRAPPC9-202ENST00000438773 GAB2Q9UQC2 676 aa10.06□□□□□ -0.8
TRAPPC9-202ENST00000438773 WNK2Q9Y3S1 2297 aa10.06□□□□□ -0.8
TRAPPC9-202ENST00000438773 NOTCH2Q04721 2471 aa10.06□□□□□ -0.8
TRAPPC9-202ENST00000438773 RAB27BO00194 218 aa10.06□□□□□ -0.8
TRAPPC9-202ENST00000438773 OR2F2O95006 317 aa10.06□□□□□ -0.8
TRAPPC9-202ENST00000438773 OR2F1Q13607 317 aa10.06□□□□□ -0.8
TRAPPC9-202ENST00000438773 FHL1Q13642 323 aa10.06□□□□□ -0.8
TRAPPC9-202ENST00000438773 SMIM21Q3B7S5 101 aa10.06□□□□□ -0.8
TRAPPC9-202ENST00000438773 ZNF660Q6AZW8 331 aaPredicted RBP10.06□□□□□ -0.8
TRAPPC9-202ENST00000438773 LCN15Q6UWW0 184 aa10.06□□□□□ -0.8
TRAPPC9-202ENST00000438773 SLC25A31Q9H0C2 315 aa10.06□□□□□ -0.8
TRAPPC9-202ENST00000438773 WDR13Q9H1Z4 485 aa10.06□□□□□ -0.8
TRAPPC9-202ENST00000438773 PLEKHF2Q9H8W4 249 aa10.06□□□□□ -0.8
TRAPPC9-202ENST00000438773 RPS16P62249 146 aaKnown RBP10.06□□□□□ -0.8
TRAPPC9-202ENST00000438773 MOGAT2Q3SYC2 334 aa10.06□□□□□ -0.8
TRAPPC9-202ENST00000438773 MYO7BQ6PIF6 2116 aa10.06□□□□□ -0.8
TRAPPC9-202ENST00000438773 OVCH2Q7RTZ1 564 aa10.06□□□□□ -0.8
TRAPPC9-202ENST00000438773 Q8IYB0 196 aa10.06□□□□□ -0.8
TRAPPC9-202ENST00000438773 ZFP62Q8NB50 900 aaPredicted RBP10.06□□□□□ -0.8
TRAPPC9-202ENST00000438773 PTX4Q96A99 478 aa10.06□□□□□ -0.8
TRAPPC9-202ENST00000438773 PRELID3BQ9Y3B1 194 aa10.06□□□□□ -0.8
TRAPPC9-202ENST00000438773 CEBPZOSA8MTT3 80 aa10.05□□□□□ -0.8
TRAPPC9-202ENST00000438773 ZNF724A8MTY0 619 aa10.05□□□□□ -0.8
TRAPPC9-202ENST00000438773 ST8SIA3O43173 380 aa10.05□□□□□ -0.8
TRAPPC9-202ENST00000438773 FABP9Q0Z7S8 132 aa10.05□□□□□ -0.8
TRAPPC9-202ENST00000438773 ENDOGQ14249 297 aaKnown RBP10.05□□□□□ -0.8
TRAPPC9-202ENST00000438773 PIGYQ3MUY2 71 aa10.05□□□□□ -0.8
TRAPPC9-202ENST00000438773 NCMAPQ5T1S8 102 aa10.05□□□□□ -0.8
TRAPPC9-202ENST00000438773 TMEM268Q5VZI3 342 aa10.05□□□□□ -0.8
TRAPPC9-202ENST00000438773 ZNF808Q8N4W9 903 aaPredicted RBP10.05□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 34.4 ms