RNA–Protein interactions for RNA: ENST00000438700.7

PTCHD3-201, Transcript of patched domain containing 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PTCHD3, Length 2,529 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCHD3-201ENST00000438700 GEMIN2O14893 280 aaKnown RBP11.97□□□□□ -0.49
PTCHD3-201ENST00000438700 FBXO24O75426 580 aa11.97□□□□□ -0.49
PTCHD3-201ENST00000438700 WISP2O76076 250 aa11.97□□□□□ -0.49
PTCHD3-201ENST00000438700 IFNA4P05014 189 aa11.97□□□□□ -0.49
PTCHD3-201ENST00000438700 CCL2P13500 99 aa11.97□□□□□ -0.49
PTCHD3-201ENST00000438700 EDN3P14138 238 aa11.97□□□□□ -0.49
PTCHD3-201ENST00000438700 DHRS11Q6UWP2 260 aa11.97□□□□□ -0.49
PTCHD3-201ENST00000438700 AKR1E2Q96JD6 320 aa11.97□□□□□ -0.49
PTCHD3-201ENST00000438700 SCGB3A2Q96PL1 93 aa11.97□□□□□ -0.49
PTCHD3-201ENST00000438700 RSRP1Q9BUV0 290 aa11.97□□□□□ -0.49
PTCHD3-201ENST00000438700 AK3Q9UIJ7 227 aa11.97□□□□□ -0.49
PTCHD3-201ENST00000438700 LAMA5O15230 3695 aa11.97□□□□□ -0.49
PTCHD3-201ENST00000438700 ARHGAP21Q5T5U3 1957 aa11.96□□□□□ -0.49
PTCHD3-201ENST00000438700 SLC22A20A6NK97 555 aa11.96□□□□□ -0.49
PTCHD3-201ENST00000438700 SFTPBP07988 381 aa11.96□□□□□ -0.49
PTCHD3-201ENST00000438700 HOXB5P09067 269 aa11.96□□□□□ -0.49
PTCHD3-201ENST00000438700 CAV2P51636 162 aa11.96□□□□□ -0.49
PTCHD3-201ENST00000438700 FOXG1P55316 489 aaPredicted RBP11.96□□□□□ -0.49
PTCHD3-201ENST00000438700 PCBD1P61457 104 aa11.96□□□□□ -0.49
PTCHD3-201ENST00000438700 RAB32Q13637 225 aa11.96□□□□□ -0.49
PTCHD3-201ENST00000438700 PLCXD3Q63HM9 321 aa11.96□□□□□ -0.49
PTCHD3-201ENST00000438700 APH1AQ96BI3 265 aa11.96□□□□□ -0.49
PTCHD3-201ENST00000438700 NMES1Q9C002 83 aa11.96□□□□□ -0.49
PTCHD3-201ENST00000438700 RNF122Q9H9V4 155 aa11.96□□□□□ -0.49
PTCHD3-201ENST00000438700 GSKIPQ9P0R6 139 aa11.96□□□□□ -0.49
PTCHD3-201ENST00000438700 SHANK1Q9Y566 2161 aa11.96□□□□□ -0.49
PTCHD3-201ENST00000438700 TRBV6-7A0A0A0MS04 114 aa11.96□□□□□ -0.5
PTCHD3-201ENST00000438700 C5orf52A6NGY3 159 aa11.96□□□□□ -0.5
PTCHD3-201ENST00000438700 MED6O75586 246 aa11.96□□□□□ -0.5
PTCHD3-201ENST00000438700 IGHG3P01860 377 aa11.96□□□□□ -0.5
PTCHD3-201ENST00000438700 HEXAP06865 529 aa11.96□□□□□ -0.5
PTCHD3-201ENST00000438700 MMP7P09237 267 aaPredicted RBP11.96□□□□□ -0.5
PTCHD3-201ENST00000438700 RD3LP0DJH9 198 aa11.96□□□□□ -0.5
PTCHD3-201ENST00000438700 RPS2P15880 293 aaKnown RBP11.96□□□□□ -0.5
PTCHD3-201ENST00000438700 ARF1P84077 181 aaKnown RBP11.96□□□□□ -0.5
PTCHD3-201ENST00000438700 KRTAP27-1Q3LI81 207 aa11.96□□□□□ -0.5
PTCHD3-201ENST00000438700 LHFPL2Q6ZUX7 228 aa11.96□□□□□ -0.5
PTCHD3-201ENST00000438700 NUFIP2Q7Z417 695 aaKnown RBP11.96□□□□□ -0.5
PTCHD3-201ENST00000438700 LURAP1LQ8IV03 231 aa11.96□□□□□ -0.5
PTCHD3-201ENST00000438700 FBXL14Q8N1E6 418 aa11.96□□□□□ -0.5
PTCHD3-201ENST00000438700 SULT4A1Q9BR01 284 aa11.96□□□□□ -0.5
PTCHD3-201ENST00000438700 C20orf24Q9BUV8 137 aa11.96□□□□□ -0.5
PTCHD3-201ENST00000438700 RAB18Q9NP72 206 aa11.96□□□□□ -0.5
PTCHD3-201ENST00000438700 ARL6IP1Q15041 203 aa11.95□□□□□ -0.5
PTCHD3-201ENST00000438700 EIF2S3LQ2VIR3 472 aaKnown RBP11.95□□□□□ -0.5
PTCHD3-201ENST00000438700 CLEC9AQ6UXN8 241 aa11.95□□□□□ -0.5
PTCHD3-201ENST00000438700 MED12LQ86YW9 2145 aa11.95□□□□□ -0.5
PTCHD3-201ENST00000438700 ZADH2Q8N4Q0 377 aa11.95□□□□□ -0.5
PTCHD3-201ENST00000438700 OR10AD1Q8NGE0 317 aa11.95□□□□□ -0.5
PTCHD3-201ENST00000438700 SECTM1Q8WVN6 248 aa11.95□□□□□ -0.5
PTCHD3-201ENST00000438700 BCL2L14Q9BZR8 327 aa11.95□□□□□ -0.5
PTCHD3-201ENST00000438700 ANXA10Q9UJ72 324 aa11.95□□□□□ -0.5
PTCHD3-201ENST00000438700 C14orf166Q9Y224 244 aaKnown RBP11.95□□□□□ -0.5
PTCHD3-201ENST00000438700 APC2O95996 2303 aa11.95□□□□□ -0.5
PTCHD3-201ENST00000438700 HLA-HP01893 362 aa11.95□□□□□ -0.5
PTCHD3-201ENST00000438700 PTGER4P35408 488 aa11.95□□□□□ -0.5
PTCHD3-201ENST00000438700 NAAAQ02083 359 aa11.95□□□□□ -0.5
PTCHD3-201ENST00000438700 SMCO1Q147U7 214 aa11.95□□□□□ -0.5
PTCHD3-201ENST00000438700 TMEM42Q69YG0 159 aa11.95□□□□□ -0.5
PTCHD3-201ENST00000438700 OR2A2Q6IF42 318 aa11.95□□□□□ -0.5
PTCHD3-201ENST00000438700 ZNF100Q8IYN0 542 aa11.95□□□□□ -0.5
PTCHD3-201ENST00000438700 EDARADDQ8WWZ3 215 aa11.95□□□□□ -0.5
PTCHD3-201ENST00000438700 HIST1H2BAQ96A08 127 aa11.95□□□□□ -0.5
PTCHD3-201ENST00000438700 LIME1Q9H400 295 aa11.95□□□□□ -0.5
PTCHD3-201ENST00000438700 C12orf49Q9H741 205 aa11.95□□□□□ -0.5
PTCHD3-201ENST00000438700 ZNF850A8MQ14 1090 aa11.94□□□□□ -0.5
PTCHD3-201ENST00000438700 TXNL1O43396 289 aa11.94□□□□□ -0.5
PTCHD3-201ENST00000438700 GFRA3O60609 400 aa11.94□□□□□ -0.5
PTCHD3-201ENST00000438700 OR8U9P0C7N5 309 aa11.94□□□□□ -0.5
PTCHD3-201ENST00000438700 OR5H8P0DN80 308 aa11.94□□□□□ -0.5
PTCHD3-201ENST00000438700 PTAFRP25105 342 aa11.94□□□□□ -0.5
PTCHD3-201ENST00000438700 RAB5BP61020 215 aa11.94□□□□□ -0.5
PTCHD3-201ENST00000438700 CYCSP99999 105 aaKnown RBP11.94□□□□□ -0.5
PTCHD3-201ENST00000438700 FABP9Q0Z7S8 132 aa11.94□□□□□ -0.5
PTCHD3-201ENST00000438700 RTL6Q6ICC9 239 aa11.94□□□□□ -0.5
PTCHD3-201ENST00000438700 IL34Q6ZMJ4 242 aa11.94□□□□□ -0.5
PTCHD3-201ENST00000438700 CALHM1Q8IU99 346 aa11.94□□□□□ -0.5
PTCHD3-201ENST00000438700 OR8U1Q8NH10 309 aa11.94□□□□□ -0.5
PTCHD3-201ENST00000438700 SNIP1Q8TAD8 396 aaKnown RBP11.94□□□□□ -0.5
PTCHD3-201ENST00000438700 TOMM40LQ969M1 308 aa11.94□□□□□ -0.5
PTCHD3-201ENST00000438700 RPS10P5Q9NQ39 176 aa11.94□□□□□ -0.5
PTCHD3-201ENST00000438700 MIOXQ9UGB7 285 aa11.94□□□□□ -0.5
PTCHD3-201ENST00000438700 SLC7A11Q9UPY5 501 aa11.94□□□□□ -0.5
PTCHD3-201ENST00000438700 ST3GAL6Q9Y274 331 aa11.94□□□□□ -0.5
PTCHD3-201ENST00000438700 RPL36A-HNRNPH2H7BZ11 118 aa11.94□□□□□ -0.5
PTCHD3-201ENST00000438700 FCGR3AP08637 254 aa11.94□□□□□ -0.5
PTCHD3-201ENST00000438700 CHATP28329 748 aa11.94□□□□□ -0.5
PTCHD3-201ENST00000438700 S100A10P60903 97 aa11.94□□□□□ -0.5
PTCHD3-201ENST00000438700 OR8B8Q15620 311 aa11.94□□□□□ -0.5
PTCHD3-201ENST00000438700 OSR2Q8N2R0 312 aa11.94□□□□□ -0.5
PTCHD3-201ENST00000438700 SMIM8Q96KF7 97 aa11.94□□□□□ -0.5
PTCHD3-201ENST00000438700 SCNM1Q9BWG6 230 aa11.94□□□□□ -0.5
PTCHD3-201ENST00000438700 SLC5A7Q9GZV3 580 aa11.94□□□□□ -0.5
PTCHD3-201ENST00000438700 RGCCQ9H4X1 137 aa11.94□□□□□ -0.5
PTCHD3-201ENST00000438700 TINAGQ9UJW2 476 aa11.94□□□□□ -0.5
PTCHD3-201ENST00000438700 CEP295Q9C0D2 2601 aa11.93□□□□□ -0.5
PTCHD3-201ENST00000438700 MGAQ8IWI9 3026 aa11.93□□□□□ -0.5
PTCHD3-201ENST00000438700 ZNF503-AS2A6NEH8 195 aa11.93□□□□□ -0.5
PTCHD3-201ENST00000438700 A6NLC8 198 aa11.93□□□□□ -0.5
PTCHD3-201ENST00000438700 FAM157AC9JC47 383 aa11.93□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 37.7 ms