RNA–Protein interactions for RNA: ENST00000438395.5

VPS50-204, Transcript of VPS50, EARP/GARPII complex subunit, humanhuman

TSL 3

Gene VPS50, Length 538 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS50-204ENST00000438395 TP53I3Q53FA7 332 aa6.23□□□□□ -1.41
VPS50-204ENST00000438395 TMEM244Q5VVB8 128 aa6.23□□□□□ -1.41
VPS50-204ENST00000438395 C1orf146Q5VVC0 180 aa6.23□□□□□ -1.41
VPS50-204ENST00000438395 CCBE1Q6UXH8 406 aaPredicted RBP6.23□□□□□ -1.41
VPS50-204ENST00000438395 LHFPL2Q6ZUX7 228 aa6.23□□□□□ -1.41
VPS50-204ENST00000438395 SSX6Q7RTT6 188 aa6.23□□□□□ -1.41
VPS50-204ENST00000438395 RTN4RL2Q86UN3 420 aa6.23□□□□□ -1.41
VPS50-204ENST00000438395 ABHD12Q8N2K0 398 aa6.23□□□□□ -1.41
VPS50-204ENST00000438395 OR4D6Q8NGJ1 314 aa6.23□□□□□ -1.41
VPS50-204ENST00000438395 OR8J1Q8NGP2 316 aa6.23□□□□□ -1.41
VPS50-204ENST00000438395 OR13C3Q8NGS6 347 aa6.23□□□□□ -1.41
VPS50-204ENST00000438395 SPSB1Q96BD6 273 aa6.23□□□□□ -1.41
VPS50-204ENST00000438395 CPNE2Q96FN4 548 aaPredicted RBP6.23□□□□□ -1.41
VPS50-204ENST00000438395 KIRREL1Q96J84 757 aa6.23□□□□□ -1.41
VPS50-204ENST00000438395 OPALINQ96PE5 141 aa6.23□□□□□ -1.41
VPS50-204ENST00000438395 CIB1Q99828 191 aa6.23□□□□□ -1.41
VPS50-204ENST00000438395 AURKAIP1Q9NWT8 199 aaPredicted RBP6.23□□□□□ -1.41
VPS50-204ENST00000438395 GSTK1Q9Y2Q3 226 aa6.23□□□□□ -1.41
VPS50-204ENST00000438395 AMMECR1Q9Y4X0 333 aaPredicted RBP6.23□□□□□ -1.41
VPS50-204ENST00000438395 TSSC4Q9Y5U2 329 aaPredicted RBP6.23□□□□□ -1.41
VPS50-204ENST00000438395 TENM3Q9P273 2699 aa6.22□□□□□ -1.41
VPS50-204ENST00000438395 IGKV1-27A0A075B6S5 117 aa6.22□□□□□ -1.41
VPS50-204ENST00000438395 DAPL1A0PJW8 107 aa6.22□□□□□ -1.41
VPS50-204ENST00000438395 SNTNA6NMZ2 147 aa6.22□□□□□ -1.41
VPS50-204ENST00000438395 ENTPD6O75354 484 aa6.22□□□□□ -1.41
VPS50-204ENST00000438395 CIB2O75838 187 aa6.22□□□□□ -1.41
VPS50-204ENST00000438395 DUS4LO95620 317 aaKnown RBP6.22□□□□□ -1.41
VPS50-204ENST00000438395 MPIG6BO95866 241 aa6.22□□□□□ -1.41
VPS50-204ENST00000438395 LPLP06858 475 aa6.22□□□□□ -1.41
VPS50-204ENST00000438395 HTR1AP08908 422 aa6.22□□□□□ -1.41
VPS50-204ENST00000438395 CALCBP10092 127 aa6.22□□□□□ -1.41
VPS50-204ENST00000438395 IGLL1P15814 213 aa6.22□□□□□ -1.41
VPS50-204ENST00000438395 ATF1P18846 271 aa6.22□□□□□ -1.41
VPS50-204ENST00000438395 EPHA2P29317 976 aa6.22□□□□□ -1.41
VPS50-204ENST00000438395 ERP29P30040 261 aaKnown RBP6.22□□□□□ -1.41
VPS50-204ENST00000438395 OR3A1P47881 315 aa6.22□□□□□ -1.41
VPS50-204ENST00000438395 OR3A4PP47883 348 aa6.22□□□□□ -1.41
VPS50-204ENST00000438395 PRRX1P54821 245 aa6.22□□□□□ -1.41
VPS50-204ENST00000438395 BDH1Q02338 343 aa6.22□□□□□ -1.41
VPS50-204ENST00000438395 DCTN2Q13561 401 aaKnown RBP6.22□□□□□ -1.41
VPS50-204ENST00000438395 ABCA11PQ4W5N1 156 aa6.22□□□□□ -1.41
VPS50-204ENST00000438395 FOXB2Q5VYV0 432 aa6.22□□□□□ -1.41
VPS50-204ENST00000438395 KDM4DQ6B0I6 523 aa6.22□□□□□ -1.41
VPS50-204ENST00000438395 HEPN1Q6WQI6 88 aa6.22□□□□□ -1.41
VPS50-204ENST00000438395 Q6ZSR3 168 aa6.22□□□□□ -1.41
VPS50-204ENST00000438395 UTS2BQ765I0 119 aa6.22□□□□□ -1.41
VPS50-204ENST00000438395 TCF23Q7RTU1 214 aa6.22□□□□□ -1.41
VPS50-204ENST00000438395 KCTD20Q7Z5Y7 419 aa6.22□□□□□ -1.41
VPS50-204ENST00000438395 CHST4Q8NCG5 386 aa6.22□□□□□ -1.41
VPS50-204ENST00000438395 OR51D1Q8NGF3 324 aa6.22□□□□□ -1.41
VPS50-204ENST00000438395 OR4P4Q8NGL7 312 aa6.22□□□□□ -1.41
VPS50-204ENST00000438395 OR13C9Q8NGT0 318 aa6.22□□□□□ -1.41
VPS50-204ENST00000438395 BCAS4Q8TDM0 211 aa6.22□□□□□ -1.41
VPS50-204ENST00000438395 TOMM40LQ969M1 308 aa6.22□□□□□ -1.41
VPS50-204ENST00000438395 RFT1Q96AA3 541 aa6.22□□□□□ -1.41
VPS50-204ENST00000438395 RPEQ96AT9 228 aa6.22□□□□□ -1.41
VPS50-204ENST00000438395 RCC1LQ96I51 464 aaKnown RBP6.22□□□□□ -1.41
VPS50-204ENST00000438395 SLC25A33Q9BSK2 321 aa6.22□□□□□ -1.41
VPS50-204ENST00000438395 GABARAPL1Q9H0R8 117 aa6.22□□□□□ -1.41
VPS50-204ENST00000438395 SEBOXQ9HB31 216 aaPredicted RBP6.22□□□□□ -1.41
VPS50-204ENST00000438395 HMG20AQ9NP66 347 aa6.22□□□□□ -1.41
VPS50-204ENST00000438395 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP6.22□□□□□ -1.41
VPS50-204ENST00000438395 PCDHB16Q9NRJ7 776 aa6.22□□□□□ -1.41
VPS50-204ENST00000438395 ING3Q9NXR8 418 aa6.22□□□□□ -1.41
VPS50-204ENST00000438395 OR6C3Q9NZP0 311 aa6.22□□□□□ -1.41
VPS50-204ENST00000438395 IL36RNQ9UBH0 155 aa6.22□□□□□ -1.41
VPS50-204ENST00000438395 HHLA2Q9UM44 414 aa6.22□□□□□ -1.41
VPS50-204ENST00000438395 AP4S1Q9Y587 144 aa6.22□□□□□ -1.41
VPS50-204ENST00000438395 CMYA5Q8N3K9 4069 aa6.22□□□□□ -1.41
VPS50-204ENST00000438395 ODAMA1E959 279 aa6.21□□□□□ -1.42
VPS50-204ENST00000438395 FAM172BPA6NC97 362 aa6.21□□□□□ -1.42
VPS50-204ENST00000438395 FAM90A22PA8MWA6 464 aa6.21□□□□□ -1.42
VPS50-204ENST00000438395 NUDT19A8MXV4 375 aa6.21□□□□□ -1.42
VPS50-204ENST00000438395 OOSP1A8MZH6 123 aa6.21□□□□□ -1.42
VPS50-204ENST00000438395 E9PQ18 207 aa6.21□□□□□ -1.42
VPS50-204ENST00000438395 PSPNO60542 156 aa6.21□□□□□ -1.42
VPS50-204ENST00000438395 OR2F2O95006 317 aa6.21□□□□□ -1.42
VPS50-204ENST00000438395 OR2H2O95918 312 aa6.21□□□□□ -1.42
VPS50-204ENST00000438395 HCKP08631 526 aa6.21□□□□□ -1.42
VPS50-204ENST00000438395 RPSAP08865 295 aaKnown RBP6.21□□□□□ -1.42
VPS50-204ENST00000438395 FAM106CPP0CH98 169 aa6.21□□□□□ -1.42
VPS50-204ENST00000438395 TMEM225BP0DP42 221 aa6.21□□□□□ -1.42
VPS50-204ENST00000438395 CD24P25063 80 aa6.21□□□□□ -1.42
VPS50-204ENST00000438395 NFYBP25208 207 aa6.21□□□□□ -1.42
VPS50-204ENST00000438395 GLP1RP43220 463 aa6.21□□□□□ -1.42
VPS50-204ENST00000438395 KIR3DL2P43630 455 aa6.21□□□□□ -1.42
VPS50-204ENST00000438395 NPBWR2P48146 333 aa6.21□□□□□ -1.42
VPS50-204ENST00000438395 CD83Q01151 205 aa6.21□□□□□ -1.42
VPS50-204ENST00000438395 PDZK1IP1Q13113 114 aa6.21□□□□□ -1.42
VPS50-204ENST00000438395 ZNF146Q15072 292 aa6.21□□□□□ -1.42
VPS50-204ENST00000438395 KRBOX4Q5JUW0 171 aa6.21□□□□□ -1.42
VPS50-204ENST00000438395 LDLRAD2Q5SZI1 272 aa6.21□□□□□ -1.42
VPS50-204ENST00000438395 AMIGO2Q86SJ2 522 aa6.21□□□□□ -1.42
VPS50-204ENST00000438395 RDH10Q8IZV5 341 aa6.21□□□□□ -1.42
VPS50-204ENST00000438395 PRSS35Q8N3Z0 413 aa6.21□□□□□ -1.42
VPS50-204ENST00000438395 OR52N4Q8NGI2 321 aa6.21□□□□□ -1.42
VPS50-204ENST00000438395 OR5D18Q8NGL1 313 aa6.21□□□□□ -1.42
VPS50-204ENST00000438395 OR2G2Q8NGZ5 317 aa6.21□□□□□ -1.42
VPS50-204ENST00000438395 MYDGFQ969H8 173 aa6.21□□□□□ -1.42
VPS50-204ENST00000438395 FGGYQ96C11 551 aa6.21□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 51.1 ms