RNA–Protein interactions for RNA: ENST00000435747.2

CPNE1-214, Transcript of copine 1, humanhuman

TSL 3

Gene CPNE1, Length 400 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-214ENST00000435747 SNX22Q96L94 193 aa8.28□□□□□ -1.08
CPNE1-214ENST00000435747 HEXA-AS1Q9H8Q6 139 aa8.28□□□□□ -1.08
CPNE1-214ENST00000435747 ISG20L2Q9H9L3 353 aaKnown RBP8.28□□□□□ -1.08
CPNE1-214ENST00000435747 EDA2RQ9HAV5 297 aa8.28□□□□□ -1.08
CPNE1-214ENST00000435747 S100A14Q9HCY8 104 aa8.28□□□□□ -1.08
CPNE1-214ENST00000435747 IMPAD1Q9NX62 359 aa8.28□□□□□ -1.08
CPNE1-214ENST00000435747 A0A1W2PPH5 198 aa8.27□□□□□ -1.09
CPNE1-214ENST00000435747 DAPL1A0PJW8 107 aa8.27□□□□□ -1.09
CPNE1-214ENST00000435747 MEX3AA1L020 520 aaKnown RBP8.27□□□□□ -1.09
CPNE1-214ENST00000435747 E9PI62 339 aa8.27□□□□□ -1.09
CPNE1-214ENST00000435747 WBP4O75554 376 aaKnown RBP8.27□□□□□ -1.09
CPNE1-214ENST00000435747 KDM4BO94953 1096 aa8.27□□□□□ -1.09
CPNE1-214ENST00000435747 HAND1O96004 215 aa8.27□□□□□ -1.09
CPNE1-214ENST00000435747 SERPINA3P01011 423 aa8.27□□□□□ -1.09
CPNE1-214ENST00000435747 IGHV1-8P0DP01 117 aa8.27□□□□□ -1.09
CPNE1-214ENST00000435747 PIPP12273 146 aaPredicted RBP8.27□□□□□ -1.09
CPNE1-214ENST00000435747 OR3A1P47881 315 aa8.27□□□□□ -1.09
CPNE1-214ENST00000435747 THBS3P49746 956 aa8.27□□□□□ -1.09
CPNE1-214ENST00000435747 ZP1P60852 638 aa8.27□□□□□ -1.09
CPNE1-214ENST00000435747 MEF2CQ06413 473 aaPredicted RBP8.27□□□□□ -1.09
CPNE1-214ENST00000435747 PDZK1IP1Q13113 114 aa8.27□□□□□ -1.09
CPNE1-214ENST00000435747 ALKBH1Q13686 389 aaKnown RBP8.27□□□□□ -1.09
CPNE1-214ENST00000435747 SPIN3Q5JUX0 258 aa8.27□□□□□ -1.09
CPNE1-214ENST00000435747 ZNF782Q6ZMW2 699 aaPredicted RBP8.27□□□□□ -1.09
CPNE1-214ENST00000435747 Q6ZS46 218 aa8.27□□□□□ -1.09
CPNE1-214ENST00000435747 SATL1Q86VE3 508 aa8.27□□□□□ -1.09
CPNE1-214ENST00000435747 TMEM219Q86XT9 240 aa8.27□□□□□ -1.09
CPNE1-214ENST00000435747 FAM58AQ8N1B3 248 aa8.27□□□□□ -1.09
CPNE1-214ENST00000435747 ASCC1Q8N9N2 400 aaKnown RBP8.27□□□□□ -1.09
CPNE1-214ENST00000435747 RPS4Y2Q8TD47 263 aa8.27□□□□□ -1.09
CPNE1-214ENST00000435747 OPALINQ96PE5 141 aa8.27□□□□□ -1.09
CPNE1-214ENST00000435747 JAM3Q9BX67 310 aa8.27□□□□□ -1.09
CPNE1-214ENST00000435747 COMMD4Q9H0A8 199 aa8.27□□□□□ -1.09
CPNE1-214ENST00000435747 HMG20AQ9NP66 347 aa8.27□□□□□ -1.09
CPNE1-214ENST00000435747 ERVK13-1Q9NX77 482 aa8.27□□□□□ -1.09
CPNE1-214ENST00000435747 HHLA2Q9UM44 414 aa8.27□□□□□ -1.09
CPNE1-214ENST00000435747 TCF19Q9Y242 345 aa8.27□□□□□ -1.09
CPNE1-214ENST00000435747 GMPPBQ9Y5P6 360 aa8.27□□□□□ -1.09
CPNE1-214ENST00000435747 J3QLW9 94 aa8.26□□□□□ -1.09
CPNE1-214ENST00000435747 MMP23AO75900 390 aa8.26□□□□□ -1.09
CPNE1-214ENST00000435747 HTR1AP08908 422 aa8.26□□□□□ -1.09
CPNE1-214ENST00000435747 LIMS3P0CW19 117 aa8.26□□□□□ -1.09
CPNE1-214ENST00000435747 LIMS4P0CW20 117 aa8.26□□□□□ -1.09
CPNE1-214ENST00000435747 ZNF19P17023 458 aa8.26□□□□□ -1.09
CPNE1-214ENST00000435747 PRKACBP22694 351 aa8.26□□□□□ -1.09
CPNE1-214ENST00000435747 COX7A1P24310 79 aa8.26□□□□□ -1.09
CPNE1-214ENST00000435747 ERP29P30040 261 aaKnown RBP8.26□□□□□ -1.09
CPNE1-214ENST00000435747 VEGFCP49767 419 aa8.26□□□□□ -1.09
CPNE1-214ENST00000435747 ATP1B3P54709 279 aa8.26□□□□□ -1.09
CPNE1-214ENST00000435747 MTCP1P56278 107 aa8.26□□□□□ -1.09
CPNE1-214ENST00000435747 ACTA2P62736 377 aa8.26□□□□□ -1.09
CPNE1-214ENST00000435747 ACTG2P63267 376 aa8.26□□□□□ -1.09
CPNE1-214ENST00000435747 RAB40BQ12829 278 aa8.26□□□□□ -1.09
CPNE1-214ENST00000435747 Q6P435 159 aa8.26□□□□□ -1.09
CPNE1-214ENST00000435747 OVCH2Q7RTZ1 564 aa8.26□□□□□ -1.09
CPNE1-214ENST00000435747 LHFPL3Q86UP9 236 aa8.26□□□□□ -1.09
CPNE1-214ENST00000435747 PQLC1Q8N2U9 271 aa8.26□□□□□ -1.09
CPNE1-214ENST00000435747 PARP16Q8N5Y8 322 aa8.26□□□□□ -1.09
CPNE1-214ENST00000435747 TPRX1Q8N7U7 411 aa8.26□□□□□ -1.09
CPNE1-214ENST00000435747 RGP1Q92546 391 aaPredicted RBP8.26□□□□□ -1.09
CPNE1-214ENST00000435747 EMG1Q92979 244 aaKnown RBP8.26□□□□□ -1.09
CPNE1-214ENST00000435747 C9orf16Q9BUW7 83 aa8.26□□□□□ -1.09
CPNE1-214ENST00000435747 ADI1Q9BV57 179 aa8.26□□□□□ -1.09
CPNE1-214ENST00000435747 ALG8Q9BVK2 526 aa8.26□□□□□ -1.09
CPNE1-214ENST00000435747 CHST6Q9GZX3 395 aa8.26□□□□□ -1.09
CPNE1-214ENST00000435747 AMBNQ9NP70 447 aa8.26□□□□□ -1.09
CPNE1-214ENST00000435747 FAM118AQ9NWS6 357 aa8.26□□□□□ -1.09
CPNE1-214ENST00000435747 TBL2Q9Y4P3 447 aaKnown RBP8.26□□□□□ -1.09
CPNE1-214ENST00000435747 ORC6Q9Y5N6 252 aa8.26□□□□□ -1.09
CPNE1-214ENST00000435747 LINC00312Q9Y6C7 94 aa8.26□□□□□ -1.09
CPNE1-214ENST00000435747 LOC100130705A0A1B0GUX0 176 aa8.25□□□□□ -1.09
CPNE1-214ENST00000435747 hCG_1809904A0A1W2PP81 198 aa8.25□□□□□ -1.09
CPNE1-214ENST00000435747 A0A1W2PPE2 198 aa8.25□□□□□ -1.09
CPNE1-214ENST00000435747 A0A1W2PR64 198 aa8.25□□□□□ -1.09
CPNE1-214ENST00000435747 A0A1W2PRV1 198 aa8.25□□□□□ -1.09
CPNE1-214ENST00000435747 A6NDX4 124 aa8.25□□□□□ -1.09
CPNE1-214ENST00000435747 MGST3O14880 152 aa8.25□□□□□ -1.09
CPNE1-214ENST00000435747 SLC25A17O43808 307 aa8.25□□□□□ -1.09
CPNE1-214ENST00000435747 MPZL2O60487 215 aa8.25□□□□□ -1.09
CPNE1-214ENST00000435747 INMTO95050 263 aa8.25□□□□□ -1.09
CPNE1-214ENST00000435747 OR2H2O95918 312 aa8.25□□□□□ -1.09
CPNE1-214ENST00000435747 CSN2P05814 226 aa8.25□□□□□ -1.09
CPNE1-214ENST00000435747 CALCBP10092 127 aa8.25□□□□□ -1.09
CPNE1-214ENST00000435747 JUNBP17275 347 aaPredicted RBP8.25□□□□□ -1.09
CPNE1-214ENST00000435747 DUSP1P28562 367 aa8.25□□□□□ -1.09
CPNE1-214ENST00000435747 POU3F4P49335 361 aa8.25□□□□□ -1.09
CPNE1-214ENST00000435747 DYNLT3P51808 116 aa8.25□□□□□ -1.09
CPNE1-214ENST00000435747 LUMP51884 338 aaPredicted RBP8.25□□□□□ -1.09
CPNE1-214ENST00000435747 GP2P55259 537 aaKnown RBP8.25□□□□□ -1.09
CPNE1-214ENST00000435747 P2RX3P56373 397 aa8.25□□□□□ -1.09
CPNE1-214ENST00000435747 EDDM3BP56851 147 aa8.25□□□□□ -1.09
CPNE1-214ENST00000435747 BLCAPP62952 87 aa8.25□□□□□ -1.09
CPNE1-214ENST00000435747 CDK5R1Q15078 307 aa8.25□□□□□ -1.09
CPNE1-214ENST00000435747 SMN1Q16637 294 aaKnown RBP8.25□□□□□ -1.09
CPNE1-214ENST00000435747 KIAA2026Q5HYC2 2103 aa8.25□□□□□ -1.09
CPNE1-214ENST00000435747 XAF1Q6GPH4 301 aa8.25□□□□□ -1.09
CPNE1-214ENST00000435747 GDPD3Q7L5L3 318 aa8.25□□□□□ -1.09
CPNE1-214ENST00000435747 SAXO1Q8IYX7 474 aa8.25□□□□□ -1.09
CPNE1-214ENST00000435747 OR52I1Q8NGK6 324 aa8.25□□□□□ -1.09
CPNE1-214ENST00000435747 OR13C9Q8NGT0 318 aa8.25□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 43.8 ms