RNA–Protein interactions for RNA: ENST00000435607.3

SCN4A-201, Transcript of sodium voltage-gated channel alpha subunit 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SCN4A, Length 7,805 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN4A-201ENST00000435607 RAB37Q96AX2 223 aa9.92□□□□□ -0.82
SCN4A-201ENST00000435607 GFRA3O60609 400 aa9.92□□□□□ -0.82
SCN4A-201ENST00000435607 C1QBP02746 253 aa9.92□□□□□ -0.82
SCN4A-201ENST00000435607 ATP5J2P56134 94 aa9.92□□□□□ -0.82
SCN4A-201ENST00000435607 CENPVQ7Z7K6 275 aaPredicted RBP9.92□□□□□ -0.82
SCN4A-201ENST00000435607 OR4A5Q8NH83 315 aa9.92□□□□□ -0.82
SCN4A-201ENST00000435607 NUBPLQ8TB37 319 aa9.92□□□□□ -0.82
SCN4A-201ENST00000435607 C10orf35Q96D05 121 aa9.92□□□□□ -0.82
SCN4A-201ENST00000435607 ZNF735P0CB33 412 aa9.92□□□□□ -0.82
SCN4A-201ENST00000435607 NXPH1P58417 271 aa9.92□□□□□ -0.82
SCN4A-201ENST00000435607 TAGLNQ01995 201 aaKnown RBP9.92□□□□□ -0.82
SCN4A-201ENST00000435607 LRP11Q86VZ4 500 aa9.92□□□□□ -0.82
SCN4A-201ENST00000435607 TREM2Q9NZC2 230 aa9.92□□□□□ -0.82
SCN4A-201ENST00000435607 MAP1LC3B2A6NCE7 125 aa9.92□□□□□ -0.82
SCN4A-201ENST00000435607 BCL2L11O43521 198 aa9.92□□□□□ -0.82
SCN4A-201ENST00000435607 PRR35P0CG20 571 aa9.92□□□□□ -0.82
SCN4A-201ENST00000435607 PDLIM4P50479 330 aa9.92□□□□□ -0.82
SCN4A-201ENST00000435607 ELOBQ15370 118 aa9.92□□□□□ -0.82
SCN4A-201ENST00000435607 CDCA4Q9BXL8 241 aa9.92□□□□□ -0.82
SCN4A-201ENST00000435607 MAP1LC3BQ9GZQ8 125 aa9.92□□□□□ -0.82
SCN4A-201ENST00000435607 A0A0A6YYD5 115 aa9.92□□□□□ -0.82
SCN4A-201ENST00000435607 IGHV5-51A0A0C4DH38 117 aa9.92□□□□□ -0.82
SCN4A-201ENST00000435607 FCMRO60667 390 aa9.92□□□□□ -0.82
SCN4A-201ENST00000435607 POLR2IP36954 125 aaKnown RBP9.92□□□□□ -0.82
SCN4A-201ENST00000435607 TOMM20LQ6UXN7 152 aa9.92□□□□□ -0.82
SCN4A-201ENST00000435607 LINC00596Q86U02 117 aa9.92□□□□□ -0.82
SCN4A-201ENST00000435607 ISLRO14498 428 aa9.91□□□□□ -0.82
SCN4A-201ENST00000435607 ASAH1Q13510 395 aa9.91□□□□□ -0.82
SCN4A-201ENST00000435607 PRSS8Q16651 343 aa9.91□□□□□ -0.82
SCN4A-201ENST00000435607 CXorf66Q5JRM2 361 aaPredicted RBP9.91□□□□□ -0.82
SCN4A-201ENST00000435607 RHBDD2Q6NTF9 364 aa9.91□□□□□ -0.82
SCN4A-201ENST00000435607 D2HGDHQ8N465 521 aa9.91□□□□□ -0.82
SCN4A-201ENST00000435607 OR4X1Q8NH49 305 aa9.91□□□□□ -0.82
SCN4A-201ENST00000435607 FAM222BQ8WU58 562 aa9.91□□□□□ -0.82
SCN4A-201ENST00000435607 NTN4Q9HB63 628 aa9.91□□□□□ -0.82
SCN4A-201ENST00000435607 PPM1DO15297 605 aa9.91□□□□□ -0.82
SCN4A-201ENST00000435607 SPINK4O60575 86 aa9.91□□□□□ -0.82
SCN4A-201ENST00000435607 IL13RA2Q14627 380 aa9.91□□□□□ -0.82
SCN4A-201ENST00000435607 SRD5A3Q9H8P0 318 aa9.91□□□□□ -0.82
SCN4A-201ENST00000435607 C7orf72A4D263 438 aa9.91□□□□□ -0.82
SCN4A-201ENST00000435607 SHISA8B8ZZ34 492 aa9.91□□□□□ -0.82
SCN4A-201ENST00000435607 AKR7A2O43488 359 aa9.91□□□□□ -0.82
SCN4A-201ENST00000435607 HIST1H1DP16402 221 aaKnown RBP9.91□□□□□ -0.82
SCN4A-201ENST00000435607 ZXDAP98168 799 aa9.91□□□□□ -0.82
SCN4A-201ENST00000435607 STPG1Q5TH74 334 aa9.91□□□□□ -0.82
SCN4A-201ENST00000435607 GLCCI1Q86VQ1 547 aa9.91□□□□□ -0.82
SCN4A-201ENST00000435607 OR6X1Q8NH79 312 aa9.91□□□□□ -0.82
SCN4A-201ENST00000435607 JMJD8Q96S16 334 aa9.91□□□□□ -0.82
SCN4A-201ENST00000435607 GABARAPL3Q9BY60 117 aa9.91□□□□□ -0.82
SCN4A-201ENST00000435607 KIF13AQ9H1H9 1805 aa9.91□□□□□ -0.82
SCN4A-201ENST00000435607 GAPDHP04406 335 aaKnown RBP9.91□□□□□ -0.82
SCN4A-201ENST00000435607 METAP1P53582 386 aa9.91□□□□□ -0.82
SCN4A-201ENST00000435607 OR5C1Q8NGR4 320 aa9.91□□□□□ -0.82
SCN4A-201ENST00000435607 DUX5Q96PT3 197 aa9.91□□□□□ -0.82
SCN4A-201ENST00000435607 NXF2Q9GZY0 626 aaKnown RBP9.91□□□□□ -0.82
SCN4A-201ENST00000435607 DAOP14920 347 aa9.91□□□□□ -0.82
SCN4A-201ENST00000435607 CRYGNQ8WXF5 182 aa9.91□□□□□ -0.82
SCN4A-201ENST00000435607 LOXL4Q96JB6 756 aa9.91□□□□□ -0.82
SCN4A-201ENST00000435607 NEURL2Q9BR09 285 aa9.91□□□□□ -0.82
SCN4A-201ENST00000435607 DDX60Q8IY21 1712 aaKnown RBP9.91□□□□□ -0.82
SCN4A-201ENST00000435607 A0A1W2PNV4 684 aa9.91□□□□□ -0.82
SCN4A-201ENST00000435607 S1PR2O95136 353 aa9.91□□□□□ -0.82
SCN4A-201ENST00000435607 MAS1LP35410 378 aa9.91□□□□□ -0.82
SCN4A-201ENST00000435607 LINC00299Q6ZSB3 139 aa9.91□□□□□ -0.82
SCN4A-201ENST00000435607 ZNF738Q8NE65 137 aa9.91□□□□□ -0.82
SCN4A-201ENST00000435607 RSG1Q9BU20 258 aa9.91□□□□□ -0.82
SCN4A-201ENST00000435607 PRKNO60260 465 aaPredicted RBP9.91□□□□□ -0.82
SCN4A-201ENST00000435607 PPP1R17O96001 155 aa9.91□□□□□ -0.82
SCN4A-201ENST00000435607 CDX1P47902 265 aaPredicted RBP9.91□□□□□ -0.82
SCN4A-201ENST00000435607 RPL31P62899 125 aaKnown RBP9.91□□□□□ -0.82
SCN4A-201ENST00000435607 THSD4Q6ZMP0 1018 aa9.91□□□□□ -0.82
SCN4A-201ENST00000435607 TMEM174Q8WUU8 243 aa9.91□□□□□ -0.82
SCN4A-201ENST00000435607 SPAARA0A1B0GVQ0 90 aa9.9□□□□□ -0.82
SCN4A-201ENST00000435607 DUXBA0A1W2PPF3 345 aa9.9□□□□□ -0.82
SCN4A-201ENST00000435607 RER1O15258 196 aa9.9□□□□□ -0.82
SCN4A-201ENST00000435607 CST4P01036 141 aa9.9□□□□□ -0.82
SCN4A-201ENST00000435607 GBGT1Q8N5D6 347 aa9.9□□□□□ -0.82
SCN4A-201ENST00000435607 EID2BQ96D98 161 aa9.9□□□□□ -0.82
SCN4A-201ENST00000435607 SMOC1Q9H4F8 434 aa9.9□□□□□ -0.82
SCN4A-201ENST00000435607 HIGD1AQ9Y241 93 aa9.9□□□□□ -0.82
SCN4A-201ENST00000435607 TMEM56-RWDD3S4R434 201 aa9.9□□□□□ -0.82
SCN4A-201ENST00000435607 A0A1B0GU03 582 aa9.9□□□□□ -0.82
SCN4A-201ENST00000435607 A6NDN8 102 aa9.9□□□□□ -0.82
SCN4A-201ENST00000435607 DHRS7CA6NNS2 312 aa9.9□□□□□ -0.82
SCN4A-201ENST00000435607 PRSS2P07478 247 aa9.9□□□□□ -0.82
SCN4A-201ENST00000435607 GALNSP34059 522 aa9.9□□□□□ -0.82
SCN4A-201ENST00000435607 TFPI2P48307 235 aa9.9□□□□□ -0.82
SCN4A-201ENST00000435607 SSX1Q16384 188 aa9.9□□□□□ -0.82
SCN4A-201ENST00000435607 ZNF841Q6ZN19 808 aa9.9□□□□□ -0.82
SCN4A-201ENST00000435607 ZBTB34Q8NCN2 500 aa9.9□□□□□ -0.82
SCN4A-201ENST00000435607 ARHGAP5-AS1Q96IT6 56 aa9.9□□□□□ -0.82
SCN4A-201ENST00000435607 ING1Q9UK53 422 aaPredicted RBP9.9□□□□□ -0.82
SCN4A-201ENST00000435607 RGS13O14921 159 aa9.9□□□□□ -0.82
SCN4A-201ENST00000435607 RPS27P42677 84 aaKnown RBP9.9□□□□□ -0.82
SCN4A-201ENST00000435607 MAGEA5P43359 124 aa9.9□□□□□ -0.82
SCN4A-201ENST00000435607 ZNF117Q03924 483 aa9.9□□□□□ -0.82
SCN4A-201ENST00000435607 OR52B4Q8NGK2 314 aa9.9□□□□□ -0.82
SCN4A-201ENST00000435607 WBP1LQ9NX94 342 aa9.9□□□□□ -0.82
SCN4A-201ENST00000435607 H3BMH7 237 aa9.9□□□□□ -0.82
SCN4A-201ENST00000435607 OR2A4O95047 310 aa9.9□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 42.4 ms