RNA–Protein interactions for RNA: ENST00000433541.1

TREX1-201, Transcript of three prime repair exonuclease 1, humanhuman

TSL 1 (best) BASIC

Gene TREX1, Length 1,105 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TREX1-201ENST00000433541 RAB11BQ15907 218 aa12.79□□□□□ -0.36
TREX1-201ENST00000433541 ASCL4Q6XD76 172 aa12.79□□□□□ -0.36
TREX1-201ENST00000433541 C17orf107Q6ZR85 190 aa12.79□□□□□ -0.36
TREX1-201ENST00000433541 LY6G5BQ8NDX9 201 aa12.79□□□□□ -0.36
TREX1-201ENST00000433541 OR51T1Q8NGJ9 327 aa12.79□□□□□ -0.36
TREX1-201ENST00000433541 OR6M1Q8NGM8 313 aa12.79□□□□□ -0.36
TREX1-201ENST00000433541 CHCHD6Q9BRQ6 235 aa12.79□□□□□ -0.36
TREX1-201ENST00000433541 SIRPDQ9H106 197 aa12.79□□□□□ -0.36
TREX1-201ENST00000433541 A0A0G2JK05 382 aa12.78□□□□□ -0.36
TREX1-201ENST00000433541 hADV38S2A0JD32 116 aa12.78□□□□□ -0.36
TREX1-201ENST00000433541 GEMIN2O14893 280 aaKnown RBP12.78□□□□□ -0.36
TREX1-201ENST00000433541 IGHV4-38-2P0DP08 117 aa12.78□□□□□ -0.36
TREX1-201ENST00000433541 CCL3L1P16619 93 aa12.78□□□□□ -0.36
TREX1-201ENST00000433541 GALP22466 123 aa12.78□□□□□ -0.36
TREX1-201ENST00000433541 PSMD7P51665 324 aa12.78□□□□□ -0.36
TREX1-201ENST00000433541 AESQ08117 197 aa12.78□□□□□ -0.36
TREX1-201ENST00000433541 TAF9Q16594 264 aa12.78□□□□□ -0.36
TREX1-201ENST00000433541 KRBOX4Q5JUW0 171 aa12.78□□□□□ -0.36
TREX1-201ENST00000433541 SYT6Q5T7P8 510 aaPredicted RBP12.78□□□□□ -0.36
TREX1-201ENST00000433541 TMEM200BQ69YZ2 307 aa12.78□□□□□ -0.36
TREX1-201ENST00000433541 Q6P435 159 aa12.78□□□□□ -0.36
TREX1-201ENST00000433541 RBMS3Q6XE24 437 aaKnown RBP12.78□□□□□ -0.36
TREX1-201ENST00000433541 BRD3OSQ6XYD6 125 aa12.78□□□□□ -0.36
TREX1-201ENST00000433541 LINC00596Q86U02 117 aa12.78□□□□□ -0.36
TREX1-201ENST00000433541 ZNF418Q8TF45 676 aaPredicted RBP12.78□□□□□ -0.36
TREX1-201ENST00000433541 OR51E2Q9H255 320 aa12.78□□□□□ -0.36
TREX1-201ENST00000433541 SEBOXQ9HB31 216 aaPredicted RBP12.78□□□□□ -0.36
TREX1-201ENST00000433541 TXNL4BQ9NX01 149 aaKnown RBP12.78□□□□□ -0.36
TREX1-201ENST00000433541 GHRLQ9UBU3 117 aa12.78□□□□□ -0.36
TREX1-201ENST00000433541 V9GY05 133 aa12.78□□□□□ -0.36
TREX1-201ENST00000433541 TRGV10A0A0A0MS01 117 aa12.77□□□□□ -0.37
TREX1-201ENST00000433541 SMIM30A4D0T7 59 aa12.77□□□□□ -0.37
TREX1-201ENST00000433541 M0R1W7 72 aa12.77□□□□□ -0.37
TREX1-201ENST00000433541 ARSBP15848 533 aa12.77□□□□□ -0.37
TREX1-201ENST00000433541 RAB3BP20337 219 aa12.77□□□□□ -0.37
TREX1-201ENST00000433541 RANBP1P43487 201 aa12.77□□□□□ -0.37
TREX1-201ENST00000433541 P2RX3P56373 397 aa12.77□□□□□ -0.37
TREX1-201ENST00000433541 PRB3Q04118 309 aaPredicted RBP12.77□□□□□ -0.37
TREX1-201ENST00000433541 ZNF273Q14593 569 aa12.77□□□□□ -0.37
TREX1-201ENST00000433541 MPV17LQ2QL34 196 aa12.77□□□□□ -0.37
TREX1-201ENST00000433541 KLF17Q5JT82 389 aaPredicted RBP12.77□□□□□ -0.37
TREX1-201ENST00000433541 C1orf100Q5SVJ3 147 aa12.77□□□□□ -0.37
TREX1-201ENST00000433541 HES5Q5TA89 166 aa12.77□□□□□ -0.37
TREX1-201ENST00000433541 CD200R1LQ6Q8B3 271 aa12.77□□□□□ -0.37
TREX1-201ENST00000433541 METAP1DQ6UB28 335 aaPredicted RBP12.77□□□□□ -0.37
TREX1-201ENST00000433541 MRPS24Q96EL2 167 aaKnown RBP12.77□□□□□ -0.37
TREX1-201ENST00000433541 DMRTB1Q96MA1 342 aa12.77□□□□□ -0.37
TREX1-201ENST00000433541 ZNF714Q96N38 554 aa12.77□□□□□ -0.37
TREX1-201ENST00000433541 TBX15Q96SF7 602 aa12.77□□□□□ -0.37
TREX1-201ENST00000433541 SLC6A7Q99884 636 aa12.77□□□□□ -0.37
TREX1-201ENST00000433541 DPCDQ9BVM2 203 aaPredicted RBP12.77□□□□□ -0.37
TREX1-201ENST00000433541 TMEM59Q9BXS4 323 aa12.77□□□□□ -0.37
TREX1-201ENST00000433541 METTL8Q9H825 291 aaKnown RBP12.77□□□□□ -0.37
TREX1-201ENST00000433541 MXRA5Q9NR99 2828 aa12.77□□□□□ -0.37
TREX1-201ENST00000433541 ZFHX3Q15911 3703 aa12.76□□□□□ -0.37
TREX1-201ENST00000433541 TRAV1-2A0A0B4J238 106 aa12.76□□□□□ -0.37
TREX1-201ENST00000433541 A0A1W2PRD5 423 aa12.76□□□□□ -0.37
TREX1-201ENST00000433541 A0A1W2PRF3 423 aa12.76□□□□□ -0.37
TREX1-201ENST00000433541 A0A1W2PRM7 423 aa12.76□□□□□ -0.37
TREX1-201ENST00000433541 SLC17A2O00624 439 aa12.76□□□□□ -0.37
TREX1-201ENST00000433541 MMP9P14780 707 aa12.76□□□□□ -0.37
TREX1-201ENST00000433541 GADD45AP24522 165 aa12.76□□□□□ -0.37
TREX1-201ENST00000433541 LMO1P25800 156 aa12.76□□□□□ -0.37
TREX1-201ENST00000433541 GLP1RP43220 463 aa12.76□□□□□ -0.37
TREX1-201ENST00000433541 GLIPR1P48060 266 aa12.76□□□□□ -0.37
TREX1-201ENST00000433541 DLX1P56177 255 aa12.76□□□□□ -0.37
TREX1-201ENST00000433541 MEF2CQ06413 473 aaPredicted RBP12.76□□□□□ -0.37
TREX1-201ENST00000433541 KLRD1Q13241 179 aa12.76□□□□□ -0.37
TREX1-201ENST00000433541 TIMM50Q3ZCQ8 353 aa12.76□□□□□ -0.37
TREX1-201ENST00000433541 NHLRC3Q5JS37 347 aa12.76□□□□□ -0.37
TREX1-201ENST00000433541 RUSC1-AS1Q66K80 236 aa12.76□□□□□ -0.37
TREX1-201ENST00000433541 NCR3LG1Q68D85 454 aa12.76□□□□□ -0.37
TREX1-201ENST00000433541 SUMF2Q8NBJ7 301 aa12.76□□□□□ -0.37
TREX1-201ENST00000433541 TMEM104Q8NE00 496 aa12.76□□□□□ -0.37
TREX1-201ENST00000433541 Q8NFD4 153 aa12.76□□□□□ -0.37
TREX1-201ENST00000433541 KCNG3Q8TAE7 436 aa12.76□□□□□ -0.37
TREX1-201ENST00000433541 KCTD7Q96MP8 289 aa12.76□□□□□ -0.37
TREX1-201ENST00000433541 SUCNR1Q9BXA5 334 aa12.76□□□□□ -0.37
TREX1-201ENST00000433541 BARHL1Q9BZE3 327 aa12.76□□□□□ -0.37
TREX1-201ENST00000433541 KCNK15Q9H427 330 aa12.76□□□□□ -0.37
TREX1-201ENST00000433541 SPACA1Q9HBV2 294 aa12.76□□□□□ -0.37
TREX1-201ENST00000433541 ZNF69Q9UC07 566 aa12.76□□□□□ -0.37
TREX1-201ENST00000433541 LINC00312Q9Y6C7 94 aa12.76□□□□□ -0.37
TREX1-201ENST00000433541 MEIKINA0A087WXM9 373 aa12.75□□□□□ -0.37
TREX1-201ENST00000433541 TRAV24A0A0B4J272 114 aa12.75□□□□□ -0.37
TREX1-201ENST00000433541 MCRIP1C9JLW8 97 aa12.75□□□□□ -0.37
TREX1-201ENST00000433541 SLC22A1O15245 554 aa12.75□□□□□ -0.37
TREX1-201ENST00000433541 TCF21O43680 179 aa12.75□□□□□ -0.37
TREX1-201ENST00000433541 BPNT1O95861 308 aa12.75□□□□□ -0.37
TREX1-201ENST00000433541 FSHBP01225 129 aa12.75□□□□□ -0.37
TREX1-201ENST00000433541 ZNF728P0DKX0 622 aa12.75□□□□□ -0.37
TREX1-201ENST00000433541 CLDN12P56749 244 aa12.75□□□□□ -0.37
TREX1-201ENST00000433541 OR10A3P58181 314 aa12.75□□□□□ -0.37
TREX1-201ENST00000433541 GUCA2AQ02747 115 aa12.75□□□□□ -0.37
TREX1-201ENST00000433541 NKAPLQ5M9Q1 402 aa12.75□□□□□ -0.37
TREX1-201ENST00000433541 OR10K2Q6IF99 312 aa12.75□□□□□ -0.37
TREX1-201ENST00000433541 BRICD5Q6PL45 260 aa12.75□□□□□ -0.37
TREX1-201ENST00000433541 ZNF782Q6ZMW2 699 aaPredicted RBP12.75□□□□□ -0.37
TREX1-201ENST00000433541 GAL3ST2Q9H3Q3 398 aa12.75□□□□□ -0.37
TREX1-201ENST00000433541 IGHV1-69DA0A0B4J2H0 117 aa12.74□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 43.1 ms