RNA–Protein interactions for RNA: ENST00000431048.5

PTPRA-207, Transcript of protein tyrosine phosphatase, receptor type A, humanhuman

TSL 5

Gene PTPRA, Length 707 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRA-207ENST00000431048 PLEKHG7Q6ZR37 379 aa17.34■□□□□ 0.37
PTPRA-207ENST00000431048 ARHGAP24Q8N264 748 aa17.34■□□□□ 0.37
PTPRA-207ENST00000431048 DRAM1Q8N682 238 aa17.34■□□□□ 0.37
PTPRA-207ENST00000431048 OR56B4Q8NH76 319 aa17.34■□□□□ 0.37
PTPRA-207ENST00000431048 TOMM40LQ969M1 308 aa17.34■□□□□ 0.37
PTPRA-207ENST00000431048 EXOSC4Q9NPD3 245 aaKnown RBP17.34■□□□□ 0.37
PTPRA-207ENST00000431048 SNX3O60493 162 aa17.33■□□□□ 0.36
PTPRA-207ENST00000431048 C17orf58Q2M2W7 97 aa17.33■□□□□ 0.36
PTPRA-207ENST00000431048 UTF1Q5T230 341 aa17.33■□□□□ 0.36
PTPRA-207ENST00000431048 LCNL1Q6ZST4 164 aa17.33■□□□□ 0.36
PTPRA-207ENST00000431048 MEPCEQ7L2J0 689 aaKnown RBP17.33■□□□□ 0.36
PTPRA-207ENST00000431048 CATSPERDQ86XM0 798 aa17.33■□□□□ 0.36
PTPRA-207ENST00000431048 SLC35F2Q8IXU6 374 aa17.33■□□□□ 0.36
PTPRA-207ENST00000431048 GON7Q9BXV9 100 aa17.33■□□□□ 0.36
PTPRA-207ENST00000431048 CLN6Q9NWW5 311 aa17.33■□□□□ 0.36
PTPRA-207ENST00000431048 A0A1W2PPI3 338 aa17.32■□□□□ 0.36
PTPRA-207ENST00000431048 ZNF670-ZNF695F2Z2N8 137 aa17.32■□□□□ 0.36
PTPRA-207ENST00000431048 AP4M1O00189 453 aa17.32■□□□□ 0.36
PTPRA-207ENST00000431048 RPLP1P05386 114 aaKnown RBP17.32■□□□□ 0.36
PTPRA-207ENST00000431048 CGB3P0DN86 165 aa17.32■□□□□ 0.36
PTPRA-207ENST00000431048 CGB7P0DN87 165 aa17.32■□□□□ 0.36
PTPRA-207ENST00000431048 ANXA8P13928 327 aa17.32■□□□□ 0.36
PTPRA-207ENST00000431048 RAB7AP51149 207 aa17.32■□□□□ 0.36
PTPRA-207ENST00000431048 MNAT1P51948 309 aa17.32■□□□□ 0.36
PTPRA-207ENST00000431048 MS4A2Q01362 244 aa17.32■□□□□ 0.36
PTPRA-207ENST00000431048 FOXE3Q13461 319 aa17.32■□□□□ 0.36
PTPRA-207ENST00000431048 HES1Q14469 280 aa17.32■□□□□ 0.36
PTPRA-207ENST00000431048 SBSPONQ8IVN8 264 aa17.32■□□□□ 0.36
PTPRA-207ENST00000431048 OR8H3Q8N146 312 aa17.32■□□□□ 0.36
PTPRA-207ENST00000431048 PP6455Q8WZ26 134 aa17.32■□□□□ 0.36
PTPRA-207ENST00000431048 HRASLS5Q96KN8 279 aa17.32■□□□□ 0.36
PTPRA-207ENST00000431048 COMMD4Q9H0A8 199 aa17.32■□□□□ 0.36
PTPRA-207ENST00000431048 STARD9Q9P2P6 4700 aa17.32■□□□□ 0.36
PTPRA-207ENST00000431048 CSMD3Q7Z407 3707 aa17.32■□□□□ 0.36
PTPRA-207ENST00000431048 KBTBD11-OT1A0A1B0GTJ5 212 aa17.31■□□□□ 0.36
PTPRA-207ENST00000431048 LINC01548A6NM66 108 aa17.31■□□□□ 0.36
PTPRA-207ENST00000431048 J3QR06 171 aa17.31■□□□□ 0.36
PTPRA-207ENST00000431048 CCRL2O00421 344 aa17.31■□□□□ 0.36
PTPRA-207ENST00000431048 ELANEP08246 267 aa17.31■□□□□ 0.36
PTPRA-207ENST00000431048 INSL3P51460 131 aa17.31■□□□□ 0.36
PTPRA-207ENST00000431048 EBI3Q14213 229 aa17.31■□□□□ 0.36
PTPRA-207ENST00000431048 DEFB136Q30KP8 78 aa17.31■□□□□ 0.36
PTPRA-207ENST00000431048 CXorf66Q5JRM2 361 aaPredicted RBP17.31■□□□□ 0.36
PTPRA-207ENST00000431048 COQ2Q96H96 371 aa17.31■□□□□ 0.36
PTPRA-207ENST00000431048 KIRREL1Q96J84 757 aa17.31■□□□□ 0.36
PTPRA-207ENST00000431048 ADI1Q9BV57 179 aa17.31■□□□□ 0.36
PTPRA-207ENST00000431048 ADGRL4Q9HBW9 690 aa17.31■□□□□ 0.36
PTPRA-207ENST00000431048 OR6C3Q9NZP0 311 aa17.31■□□□□ 0.36
PTPRA-207ENST00000431048 GSTK1Q9Y2Q3 226 aa17.31■□□□□ 0.36
PTPRA-207ENST00000431048 CALCBP10092 127 aa17.3■□□□□ 0.36
PTPRA-207ENST00000431048 POU3F4P49335 361 aa17.3■□□□□ 0.36
PTPRA-207ENST00000431048 SNU13P55769 128 aaKnown RBP17.3■□□□□ 0.36
PTPRA-207ENST00000431048 MTCP1P56278 107 aa17.3■□□□□ 0.36
PTPRA-207ENST00000431048 PDZK1IP1Q13113 114 aa17.3■□□□□ 0.36
PTPRA-207ENST00000431048 MADCAM1Q13477 382 aa17.3■□□□□ 0.36
PTPRA-207ENST00000431048 FHL3Q13643 280 aa17.3■□□□□ 0.36
PTPRA-207ENST00000431048 HNF4GQ14541 408 aa17.3■□□□□ 0.36
PTPRA-207ENST00000431048 ODF4Q2M2E3 257 aa17.3■□□□□ 0.36
PTPRA-207ENST00000431048 KRBOX4Q5JUW0 171 aa17.3■□□□□ 0.36
PTPRA-207ENST00000431048 CHST4Q8NCG5 386 aa17.3■□□□□ 0.36
PTPRA-207ENST00000431048 LINC00574Q9H8X3 128 aa17.3■□□□□ 0.36
PTPRA-207ENST00000431048 RHOFQ9HBH0 211 aa17.3■□□□□ 0.36
PTPRA-207ENST00000431048 PALMDQ9NP74 551 aa17.3■□□□□ 0.36
PTPRA-207ENST00000431048 GAR1Q9NY12 217 aaKnown RBP17.3■□□□□ 0.36
PTPRA-207ENST00000431048 IGKV1-9A0A0C4DH69 117 aa17.29■□□□□ 0.36
PTPRA-207ENST00000431048 GNGT2O14610 69 aa17.29■□□□□ 0.36
PTPRA-207ENST00000431048 RPP14O95059 124 aaKnown RBP17.29■□□□□ 0.36
PTPRA-207ENST00000431048 KRT8P05787 483 aa17.29■□□□□ 0.36
PTPRA-207ENST00000431048 PRKACGP22612 351 aa17.29■□□□□ 0.36
PTPRA-207ENST00000431048 PRKACBP22694 351 aa17.29■□□□□ 0.36
PTPRA-207ENST00000431048 NFYBP25208 207 aa17.29■□□□□ 0.36
PTPRA-207ENST00000431048 CRISP1P54107 249 aa17.29■□□□□ 0.36
PTPRA-207ENST00000431048 GPR50Q13585 617 aa17.29■□□□□ 0.36
PTPRA-207ENST00000431048 ZNF260Q3ZCT1 412 aa17.29■□□□□ 0.36
PTPRA-207ENST00000431048 TGIF2LXQ8IUE1 241 aa17.29■□□□□ 0.36
PTPRA-207ENST00000431048 HS3ST5Q8IZT8 346 aa17.29■□□□□ 0.36
PTPRA-207ENST00000431048 YIPF7Q8N8F6 280 aa17.29■□□□□ 0.36
PTPRA-207ENST00000431048 HAVCR2Q8TDQ0 301 aa17.29■□□□□ 0.36
PTPRA-207ENST00000431048 ABCG5Q9H222 651 aa17.29■□□□□ 0.36
PTPRA-207ENST00000431048 NCOR1P1Q9H4R4 102 aa17.29■□□□□ 0.36
PTPRA-207ENST00000431048 SORL1Q92673 2214 aa17.28■□□□□ 0.36
PTPRA-207ENST00000431048 H3BSH0 61 aa17.28■□□□□ 0.36
PTPRA-207ENST00000431048 PRKYO43930 277 aa17.28■□□□□ 0.36
PTPRA-207ENST00000431048 KDM4BO94953 1096 aa17.28■□□□□ 0.36
PTPRA-207ENST00000431048 IGKV1D-33P01593 117 aa17.28■□□□□ 0.36
PTPRA-207ENST00000431048 IGKV1-33P01594 117 aa17.28■□□□□ 0.36
PTPRA-207ENST00000431048 GPR12P47775 334 aa17.28■□□□□ 0.36
PTPRA-207ENST00000431048 EFNB1P98172 346 aa17.28■□□□□ 0.36
PTPRA-207ENST00000431048 AADACL4Q5VUY2 407 aa17.28■□□□□ 0.36
PTPRA-207ENST00000431048 Q6P435 159 aa17.28■□□□□ 0.36
PTPRA-207ENST00000431048 SLC16A12Q6ZSM3 486 aa17.28■□□□□ 0.36
PTPRA-207ENST00000431048 LHFPL2Q6ZUX7 228 aa17.28■□□□□ 0.36
PTPRA-207ENST00000431048 UTS2BQ765I0 119 aa17.28■□□□□ 0.36
PTPRA-207ENST00000431048 ADGRG5Q8IZF4 528 aa17.28■□□□□ 0.36
PTPRA-207ENST00000431048 KRT84Q9NSB2 600 aa17.28■□□□□ 0.36
PTPRA-207ENST00000431048 H2AFY2Q9P0M6 372 aaPredicted RBP17.28■□□□□ 0.36
PTPRA-207ENST00000431048 IGKV1-12A0A0C4DH73 117 aa17.27■□□□□ 0.36
PTPRA-207ENST00000431048 IGKV1D-12P01611 117 aa17.27■□□□□ 0.36
PTPRA-207ENST00000431048 ATF1P18846 271 aa17.27■□□□□ 0.36
PTPRA-207ENST00000431048 DIAPH2-AS1Q14236 149 aa17.27■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms