RNA–Protein interactions for RNA: ENST00000430976.5

PTPN4-203, Transcript of protein tyrosine phosphatase, non-receptor type 4, humanhuman

TSL 5

Gene PTPN4, Length 4,154 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN4-203ENST00000430976 AMIGO3Q86WK7 504 aa4.68□□□□□ -1.66
PTPN4-203ENST00000430976 SPNS2Q8IVW8 549 aa4.68□□□□□ -1.66
PTPN4-203ENST00000430976 TMEM183AQ8IXX5 376 aa4.68□□□□□ -1.66
PTPN4-203ENST00000430976 TDHQ8IZJ6 230 aa4.68□□□□□ -1.66
PTPN4-203ENST00000430976 DUSP18Q8NEJ0 188 aa4.68□□□□□ -1.66
PTPN4-203ENST00000430976 ACVR1CQ8NER5 493 aa4.68□□□□□ -1.66
PTPN4-203ENST00000430976 OR4K17Q8NGC6 315 aa4.68□□□□□ -1.66
PTPN4-203ENST00000430976 OR13A1Q8NGR1 328 aa4.68□□□□□ -1.66
PTPN4-203ENST00000430976 C15orf40Q8WUR7 153 aa4.68□□□□□ -1.66
PTPN4-203ENST00000430976 C18orf15Q96N68 181 aa4.68□□□□□ -1.66
PTPN4-203ENST00000430976 SFXN3Q9BWM7 321 aa4.68□□□□□ -1.66
PTPN4-203ENST00000430976 GATA5Q9BWX5 397 aaPredicted RBP4.68□□□□□ -1.66
PTPN4-203ENST00000430976 TEX101Q9BY14 249 aa4.68□□□□□ -1.66
PTPN4-203ENST00000430976 NTNG1Q9Y2I2 539 aa4.68□□□□□ -1.66
PTPN4-203ENST00000430976 SIRT4Q9Y6E7 314 aaPredicted RBP4.68□□□□□ -1.66
PTPN4-203ENST00000430976 V9GYH0 126 aa4.68□□□□□ -1.66
PTPN4-203ENST00000430976 HEATR1Q9H583 2144 aaKnown RBP4.68□□□□□ -1.66
PTPN4-203ENST00000430976 ATP7BP35670 1465 aa4.68□□□□□ -1.66
PTPN4-203ENST00000430976 TNFSF12-TNFSF13A0A0A6YY99 330 aa4.68□□□□□ -1.66
PTPN4-203ENST00000430976 DUXBA0A1W2PPF3 345 aa4.68□□□□□ -1.66
PTPN4-203ENST00000430976 SERINC4A6NH21 518 aa4.68□□□□□ -1.66
PTPN4-203ENST00000430976 ZNF727A8MUV8 499 aa4.68□□□□□ -1.66
PTPN4-203ENST00000430976 CLDN5O00501 218 aa4.68□□□□□ -1.66
PTPN4-203ENST00000430976 DLL1O00548 723 aa4.68□□□□□ -1.66
PTPN4-203ENST00000430976 NDUFB8O95169 186 aa4.68□□□□□ -1.66
PTPN4-203ENST00000430976 PTHP01270 115 aa4.68□□□□□ -1.66
PTPN4-203ENST00000430976 KLK2P20151 261 aa4.68□□□□□ -1.66
PTPN4-203ENST00000430976 COL8A1P27658 744 aa4.68□□□□□ -1.66
PTPN4-203ENST00000430976 PDX1P52945 283 aa4.68□□□□□ -1.66
PTPN4-203ENST00000430976 ATP5G2Q06055 141 aa4.68□□□□□ -1.66
PTPN4-203ENST00000430976 EIF4EBP2Q13542 120 aaPredicted RBP4.68□□□□□ -1.66
PTPN4-203ENST00000430976 NKG7Q16617 165 aa4.68□□□□□ -1.66
PTPN4-203ENST00000430976 TREML2Q5T2D2 321 aa4.68□□□□□ -1.66
PTPN4-203ENST00000430976 SERTAD4-AS1Q5TG53 156 aa4.68□□□□□ -1.66
PTPN4-203ENST00000430976 C8orf86Q6ZUL3 223 aa4.68□□□□□ -1.66
PTPN4-203ENST00000430976 CA13Q8N1Q1 262 aa4.68□□□□□ -1.66
PTPN4-203ENST00000430976 UMODL1-AS1Q8N2C9 162 aa4.68□□□□□ -1.66
PTPN4-203ENST00000430976 TMEM178AQ8NBL3 297 aa4.68□□□□□ -1.66
PTPN4-203ENST00000430976 SLC35B2Q8TB61 432 aa4.68□□□□□ -1.66
PTPN4-203ENST00000430976 BRK1Q8WUW1 75 aa4.68□□□□□ -1.66
PTPN4-203ENST00000430976 OR5P3Q8WZ94 311 aa4.68□□□□□ -1.66
PTPN4-203ENST00000430976 SCARF2Q96GP6 870 aaPredicted RBP4.68□□□□□ -1.66
PTPN4-203ENST00000430976 POLR2J2Q9GZM3 115 aaKnown RBP4.68□□□□□ -1.66
PTPN4-203ENST00000430976 RBKSQ9H477 322 aa4.68□□□□□ -1.66
PTPN4-203ENST00000430976 NRN1Q9NPD7 142 aa4.68□□□□□ -1.66
PTPN4-203ENST00000430976 NOX4Q9NPH5 578 aa4.68□□□□□ -1.66
PTPN4-203ENST00000430976 IL36AQ9UHA7 158 aa4.68□□□□□ -1.66
PTPN4-203ENST00000430976 CARHSP1Q9Y2V2 147 aaKnown RBP4.68□□□□□ -1.66
PTPN4-203ENST00000430976 TRAPPC8Q9Y2L5 1435 aa4.68□□□□□ -1.66
PTPN4-203ENST00000430976 PSME4Q14997 1843 aa4.67□□□□□ -1.66
PTPN4-203ENST00000430976 CCDC179H3BU77 68 aa4.67□□□□□ -1.66
PTPN4-203ENST00000430976 CCL24O00175 119 aa4.67□□□□□ -1.66
PTPN4-203ENST00000430976 TNFSF13O75888 250 aa4.67□□□□□ -1.66
PTPN4-203ENST00000430976 NUDT3O95989 172 aa4.67□□□□□ -1.66
PTPN4-203ENST00000430976 HRASP01112 189 aa4.67□□□□□ -1.66
PTPN4-203ENST00000430976 KRASP01116 189 aa4.67□□□□□ -1.66
PTPN4-203ENST00000430976 TNFRSF1BP20333 461 aa4.67□□□□□ -1.66
PTPN4-203ENST00000430976 CCKBRP32239 447 aa4.67□□□□□ -1.66
PTPN4-203ENST00000430976 ISL1P61371 349 aa4.67□□□□□ -1.66
PTPN4-203ENST00000430976 ZNF92Q03936 586 aa4.67□□□□□ -1.66
PTPN4-203ENST00000430976 PDE4DIPQ5VU43 2346 aa4.67□□□□□ -1.66
PTPN4-203ENST00000430976 ZNF660Q6AZW8 331 aaPredicted RBP4.67□□□□□ -1.66
PTPN4-203ENST00000430976 ZNF429Q86V71 674 aa4.67□□□□□ -1.66
PTPN4-203ENST00000430976 GPR32P1Q8NGA4 272 aa4.67□□□□□ -1.66
PTPN4-203ENST00000430976 OR52E2Q8NGJ4 325 aa4.67□□□□□ -1.66
PTPN4-203ENST00000430976 PPCDCQ96CD2 204 aa4.67□□□□□ -1.66
PTPN4-203ENST00000430976 OR10C1Q96KK4 312 aa4.67□□□□□ -1.66
PTPN4-203ENST00000430976 DNAJC30Q96LL9 226 aa4.67□□□□□ -1.66
PTPN4-203ENST00000430976 DOCK7Q96N67 2140 aa4.67□□□□□ -1.66
PTPN4-203ENST00000430976 PEBP4Q96S96 227 aa4.67□□□□□ -1.66
PTPN4-203ENST00000430976 SORT1Q99523 831 aa4.67□□□□□ -1.66
PTPN4-203ENST00000430976 CXorf36Q9H7Y0 433 aa4.67□□□□□ -1.66
PTPN4-203ENST00000430976 ISG20L2Q9H9L3 353 aaKnown RBP4.67□□□□□ -1.66
PTPN4-203ENST00000430976 FOXA2Q9Y261 457 aaPredicted RBP4.67□□□□□ -1.66
PTPN4-203ENST00000430976 CDK12Q9NYV4 1490 aaPredicted RBP4.67□□□□□ -1.66
PTPN4-203ENST00000430976 PTPRJQ12913 1337 aa4.67□□□□□ -1.66
PTPN4-203ENST00000430976 ZNF860A6NHJ4 632 aa4.67□□□□□ -1.66
PTPN4-203ENST00000430976 FGF16O43320 207 aa4.67□□□□□ -1.66
PTPN4-203ENST00000430976 VTNP04004 478 aa4.67□□□□□ -1.66
PTPN4-203ENST00000430976 HLA-DQB2P05538 268 aa4.67□□□□□ -1.66
PTPN4-203ENST00000430976 LINC00694P0DN24 101 aa4.67□□□□□ -1.66
PTPN4-203ENST00000430976 GABRG2P18507 467 aa4.67□□□□□ -1.66
PTPN4-203ENST00000430976 SLC6A9P48067 706 aa4.67□□□□□ -1.66
PTPN4-203ENST00000430976 IL17AQ16552 155 aa4.67□□□□□ -1.66
PTPN4-203ENST00000430976 DOK7Q18PE1 504 aa4.67□□□□□ -1.66
PTPN4-203ENST00000430976 C11orf87Q6NUJ2 197 aa4.67□□□□□ -1.66
PTPN4-203ENST00000430976 DOK3Q7L591 496 aa4.67□□□□□ -1.66
PTPN4-203ENST00000430976 RYBPQ8N488 228 aaPredicted RBP4.67□□□□□ -1.66
PTPN4-203ENST00000430976 GGTLC1Q9BX51 225 aa4.67□□□□□ -1.66
PTPN4-203ENST00000430976 TMEM126AQ9H061 195 aa4.67□□□□□ -1.66
PTPN4-203ENST00000430976 PARP12Q9H0J9 701 aaKnown RBP4.67□□□□□ -1.66
PTPN4-203ENST00000430976 ZNF665Q9H7R5 613 aa4.67□□□□□ -1.66
PTPN4-203ENST00000430976 SIGLEC8Q9NYZ4 499 aa4.67□□□□□ -1.66
PTPN4-203ENST00000430976 SRCAPQ6ZRS2 3230 aa4.67□□□□□ -1.66
PTPN4-203ENST00000430976 CUL9Q8IWT3 2517 aa4.67□□□□□ -1.66
PTPN4-203ENST00000430976 ZNF518AQ6AHZ1 1483 aa4.67□□□□□ -1.66
PTPN4-203ENST00000430976 MDC1Q14676 2089 aaKnown RBP4.67□□□□□ -1.66
PTPN4-203ENST00000430976 ASPDHA6ND91 283 aa4.67□□□□□ -1.66
PTPN4-203ENST00000430976 MS4A18H0YCH9 400 aa4.67□□□□□ -1.66
PTPN4-203ENST00000430976 H3BP45 60 aa4.67□□□□□ -1.66
Retrieved 100 of 20,778 RNA–protein pairs in 54.5 ms