RNA–Protein interactions for RNA: ENST00000429895.5

PTPRF-206, Transcript of protein tyrosine phosphatase, receptor type F, humanhuman

TSL 1 (best)

Gene PTPRF, Length 6,312 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRF-206ENST00000429895 SULT1A1P50225 295 aa13.57□□□□□ -0.24
PTPRF-206ENST00000429895 VSTM2AQ8TAG5 236 aa13.57□□□□□ -0.24
PTPRF-206ENST00000429895 SLC25A40Q8TBP6 338 aa13.57□□□□□ -0.24
PTPRF-206ENST00000429895 TMEM171Q8WVE6 324 aa13.57□□□□□ -0.24
PTPRF-206ENST00000429895 UCN2Q96RP3 112 aa13.57□□□□□ -0.24
PTPRF-206ENST00000429895 HEXA-AS1Q9H8Q6 139 aa13.57□□□□□ -0.24
PTPRF-206ENST00000429895 MTFP1Q9UDX5 166 aa13.57□□□□□ -0.24
PTPRF-206ENST00000429895 STARD10Q9Y365 291 aa13.57□□□□□ -0.24
PTPRF-206ENST00000429895 ADAM11O75078 769 aa13.56□□□□□ -0.24
PTPRF-206ENST00000429895 RPS4Y1P22090 263 aaKnown RBP13.56□□□□□ -0.24
PTPRF-206ENST00000429895 SLC23A3Q6PIS1 610 aa13.56□□□□□ -0.24
PTPRF-206ENST00000429895 IL22RA2Q969J5 263 aa13.56□□□□□ -0.24
PTPRF-206ENST00000429895 ADTRPQ96IZ2 230 aa13.56□□□□□ -0.24
PTPRF-206ENST00000429895 MAP6Q96JE9 813 aa13.56□□□□□ -0.24
PTPRF-206ENST00000429895 OR10D4PQ8NGN7 298 aa13.56□□□□□ -0.24
PTPRF-206ENST00000429895 TOLLIPQ9H0E2 274 aa13.56□□□□□ -0.24
PTPRF-206ENST00000429895 TMEM140Q9NV12 185 aa13.56□□□□□ -0.24
PTPRF-206ENST00000429895 C1RLQ9NZP8 487 aa13.56□□□□□ -0.24
PTPRF-206ENST00000429895 GZMKP49863 264 aa13.56□□□□□ -0.24
PTPRF-206ENST00000429895 MESTQ5EB52 335 aa13.56□□□□□ -0.24
PTPRF-206ENST00000429895 SH2D5Q6ZV89 423 aa13.56□□□□□ -0.24
PTPRF-206ENST00000429895 DOLPP1Q86YN1 238 aa13.56□□□□□ -0.24
PTPRF-206ENST00000429895 MS4A7Q9GZW8 240 aaPredicted RBP13.56□□□□□ -0.24
PTPRF-206ENST00000429895 TFPI2P48307 235 aa13.56□□□□□ -0.24
PTPRF-206ENST00000429895 C21orf58P58505 322 aa13.56□□□□□ -0.24
PTPRF-206ENST00000429895 PMS2P11Q13670 270 aa13.56□□□□□ -0.24
PTPRF-206ENST00000429895 ZBTB37Q5TC79 503 aa13.56□□□□□ -0.24
PTPRF-206ENST00000429895 FAHD2BQ6P2I3 314 aaPredicted RBP13.56□□□□□ -0.24
PTPRF-206ENST00000429895 FAHD2AQ96GK7 314 aa13.56□□□□□ -0.24
PTPRF-206ENST00000429895 FBXL17Q9UF56 701 aa13.56□□□□□ -0.24
PTPRF-206ENST00000429895 C5orf52A6NGY3 159 aa13.56□□□□□ -0.24
PTPRF-206ENST00000429895 LIPT2A6NK58 231 aa13.56□□□□□ -0.24
PTPRF-206ENST00000429895 PRF1P14222 555 aa13.56□□□□□ -0.24
PTPRF-206ENST00000429895 MVDP53602 400 aa13.56□□□□□ -0.24
PTPRF-206ENST00000429895 WDR74Q6RFH5 385 aaPredicted RBP13.56□□□□□ -0.24
PTPRF-206ENST00000429895 SLC26A10Q8NG04 563 aa13.56□□□□□ -0.24
PTPRF-206ENST00000429895 DYRK2Q92630 601 aa13.56□□□□□ -0.24
PTPRF-206ENST00000429895 MRPL37Q9BZE1 423 aaKnown RBP13.56□□□□□ -0.24
PTPRF-206ENST00000429895 TMEM127O75204 238 aa13.55□□□□□ -0.24
PTPRF-206ENST00000429895 SIGLEC14Q08ET2 396 aa13.55□□□□□ -0.24
PTPRF-206ENST00000429895 CTF1Q16619 201 aa13.55□□□□□ -0.24
PTPRF-206ENST00000429895 ZNF770Q6IQ21 691 aaPredicted RBP13.55□□□□□ -0.24
PTPRF-206ENST00000429895 Q8WTZ3 238 aa13.55□□□□□ -0.24
PTPRF-206ENST00000429895 P2RX4Q99571 388 aa13.55□□□□□ -0.24
PTPRF-206ENST00000429895 CXorf51AA0A1B0GTR3 108 aa13.55□□□□□ -0.24
PTPRF-206ENST00000429895 M0R2Z0 102 aa13.55□□□□□ -0.24
PTPRF-206ENST00000429895 SOCS1O15524 211 aa13.55□□□□□ -0.24
PTPRF-206ENST00000429895 HPXP02790 462 aa13.55□□□□□ -0.24
PTPRF-206ENST00000429895 IL13RA2Q14627 380 aa13.55□□□□□ -0.24
PTPRF-206ENST00000429895 DEGS2Q6QHC5 323 aa13.55□□□□□ -0.24
PTPRF-206ENST00000429895 OR8I2Q8N0Y5 310 aa13.55□□□□□ -0.24
PTPRF-206ENST00000429895 MRM2Q9UI43 246 aaKnown RBP13.55□□□□□ -0.24
PTPRF-206ENST00000429895 KCNAB3O43448 404 aa13.55□□□□□ -0.24
PTPRF-206ENST00000429895 TTRP02766 147 aa13.55□□□□□ -0.24
PTPRF-206ENST00000429895 GGTLC2Q14390 218 aa13.55□□□□□ -0.24
PTPRF-206ENST00000429895 RNF165Q6ZSG1 346 aa13.55□□□□□ -0.24
PTPRF-206ENST00000429895 ASCL5Q7RTU5 278 aa13.55□□□□□ -0.24
PTPRF-206ENST00000429895 OR2H1Q9GZK4 316 aa13.55□□□□□ -0.24
PTPRF-206ENST00000429895 TECRQ9NZ01 308 aaKnown RBP13.55□□□□□ -0.24
PTPRF-206ENST00000429895 ZNHIT1O43257 154 aa13.55□□□□□ -0.24
PTPRF-206ENST00000429895 ADAP1O75689 374 aa13.55□□□□□ -0.24
PTPRF-206ENST00000429895 GAPTQ8N292 157 aa13.55□□□□□ -0.24
PTPRF-206ENST00000429895 NUBPLQ8TB37 319 aa13.55□□□□□ -0.24
PTPRF-206ENST00000429895 TMSB15BA0A087X1C1 80 aa13.55□□□□□ -0.24
PTPRF-206ENST00000429895 PRR35P0CG20 571 aa13.55□□□□□ -0.24
PTPRF-206ENST00000429895 FAM222BQ8WU58 562 aa13.55□□□□□ -0.24
PTPRF-206ENST00000429895 COX14Q96I36 57 aa13.55□□□□□ -0.24
PTPRF-206ENST00000429895 HARBI1Q96MB7 349 aa13.55□□□□□ -0.24
PTPRF-206ENST00000429895 CLN8Q9UBY8 286 aa13.55□□□□□ -0.24
PTPRF-206ENST00000429895 C16orf97H3BN30 126 aa13.54□□□□□ -0.24
PTPRF-206ENST00000429895 MPC2O95563 127 aa13.54□□□□□ -0.24
PTPRF-206ENST00000429895 KCNMB1Q16558 191 aa13.54□□□□□ -0.24
PTPRF-206ENST00000429895 MSRB3Q8IXL7 192 aa13.54□□□□□ -0.24
PTPRF-206ENST00000429895 FAM24BQ8N5W8 94 aa13.54□□□□□ -0.24
PTPRF-206ENST00000429895 OR4X1Q8NH49 305 aa13.54□□□□□ -0.24
PTPRF-206ENST00000429895 GPR35Q9HC97 309 aa13.54□□□□□ -0.24
PTPRF-206ENST00000429895 CROCCQ5TZA2 2017 aa13.54□□□□□ -0.24
PTPRF-206ENST00000429895 C21orf140B9A014 251 aa13.54□□□□□ -0.24
PTPRF-206ENST00000429895 KIAA0040Q15053 153 aa13.54□□□□□ -0.24
PTPRF-206ENST00000429895 ANGPTL6Q8NI99 470 aa13.54□□□□□ -0.24
PTPRF-206ENST00000429895 ALG14Q96F25 216 aa13.54□□□□□ -0.24
PTPRF-206ENST00000429895 ZNF385DQ9H6B1 395 aa13.54□□□□□ -0.24
PTPRF-206ENST00000429895 CACNA1SQ13698 1873 aa13.54□□□□□ -0.24
PTPRF-206ENST00000429895 FOXL2P58012 376 aa13.54□□□□□ -0.24
PTPRF-206ENST00000429895 NSUN5P2Q63ZY6 315 aa13.54□□□□□ -0.24
PTPRF-206ENST00000429895 EIF4E3Q8N5X7 224 aaKnown RBP13.54□□□□□ -0.24
PTPRF-206ENST00000429895 CHODLQ9H9P2 273 aa13.54□□□□□ -0.24
PTPRF-206ENST00000429895 WNT5AP41221 380 aa13.54□□□□□ -0.24
PTPRF-206ENST00000429895 ZIC1Q15915 447 aa13.54□□□□□ -0.24
PTPRF-206ENST00000429895 GAB4Q2WGN9 574 aa13.54□□□□□ -0.24
PTPRF-206ENST00000429895 PIGYQ3MUY2 71 aa13.54□□□□□ -0.24
PTPRF-206ENST00000429895 SCGB1D4Q6XE38 83 aa13.54□□□□□ -0.24
PTPRF-206ENST00000429895 LIMS2Q7Z4I7 341 aa13.54□□□□□ -0.24
PTPRF-206ENST00000429895 EID2BQ96D98 161 aa13.54□□□□□ -0.24
PTPRF-206ENST00000429895 CCL28Q9NRJ3 127 aa13.54□□□□□ -0.24
PTPRF-206ENST00000429895 PLCH1Q4KWH8 1693 aa13.54□□□□□ -0.24
PTPRF-206ENST00000429895 CLDN34H7C241 214 aa13.54□□□□□ -0.24
PTPRF-206ENST00000429895 CST2P09228 141 aa13.54□□□□□ -0.24
PTPRF-206ENST00000429895 AESQ08117 197 aa13.54□□□□□ -0.24
PTPRF-206ENST00000429895 MMDQ15546 238 aa13.54□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 76.1 ms