RNA–Protein interactions for RNA: ENST00000429629.6

GARNL3-204, Transcript of GTPase activating Rap/RanGAP domain like 3, humanhuman

TSL 5

Gene GARNL3, Length 694 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GARNL3-204ENST00000429629 GDPD3Q7L5L3 318 aa12.35□□□□□ -0.43
GARNL3-204ENST00000429629 FAM89BQ8N5H3 189 aa12.35□□□□□ -0.43
GARNL3-204ENST00000429629 TMEM104Q8NE00 496 aa12.35□□□□□ -0.43
GARNL3-204ENST00000429629 CORO2AQ92828 525 aa12.35□□□□□ -0.43
GARNL3-204ENST00000429629 Q96M66 194 aa12.35□□□□□ -0.43
GARNL3-204ENST00000429629 NKX3-1Q99801 234 aaPredicted RBP12.35□□□□□ -0.43
GARNL3-204ENST00000429629 TM2D1Q9BX74 207 aa12.35□□□□□ -0.43
GARNL3-204ENST00000429629 UNKLQ9H9P5 680 aaKnown RBP12.35□□□□□ -0.43
GARNL3-204ENST00000429629 RCC2Q9P258 522 aaKnown RBP12.35□□□□□ -0.43
GARNL3-204ENST00000429629 OPN4Q9UHM6 478 aa12.35□□□□□ -0.43
GARNL3-204ENST00000429629 SCOCQ9UIL1 159 aa12.35□□□□□ -0.43
GARNL3-204ENST00000429629 AUP1Q9Y679 476 aa12.35□□□□□ -0.43
GARNL3-204ENST00000429629 CR1P17927 2039 aa12.35□□□□□ -0.43
GARNL3-204ENST00000429629 TLN2Q9Y4G6 2542 aa12.35□□□□□ -0.43
GARNL3-204ENST00000429629 M0R1W7 72 aa12.34□□□□□ -0.43
GARNL3-204ENST00000429629 GEMIN2O14893 280 aaKnown RBP12.34□□□□□ -0.43
GARNL3-204ENST00000429629 CA11O75493 328 aa12.34□□□□□ -0.43
GARNL3-204ENST00000429629 CRTAPO75718 401 aaPredicted RBP12.34□□□□□ -0.43
GARNL3-204ENST00000429629 OR7C1O76099 320 aaPredicted RBP12.34□□□□□ -0.43
GARNL3-204ENST00000429629 IL1AP01583 271 aa12.34□□□□□ -0.43
GARNL3-204ENST00000429629 RBP4P02753 201 aa12.34□□□□□ -0.43
GARNL3-204ENST00000429629 TFF1P04155 84 aa12.34□□□□□ -0.43
GARNL3-204ENST00000429629 CALCBP10092 127 aa12.34□□□□□ -0.43
GARNL3-204ENST00000429629 FUT3P21217 361 aa12.34□□□□□ -0.43
GARNL3-204ENST00000429629 GABRR1P24046 479 aa12.34□□□□□ -0.43
GARNL3-204ENST00000429629 OR3A1P47881 315 aa12.34□□□□□ -0.43
GARNL3-204ENST00000429629 RPS27AP62979 156 aaKnown RBP12.34□□□□□ -0.43
GARNL3-204ENST00000429629 GRK1Q15835 563 aa12.34□□□□□ -0.43
GARNL3-204ENST00000429629 PIGYQ3MUY2 71 aa12.34□□□□□ -0.43
GARNL3-204ENST00000429629 FAM120AOSQ5T036 256 aa12.34□□□□□ -0.43
GARNL3-204ENST00000429629 GPR141Q7Z602 305 aa12.34□□□□□ -0.43
GARNL3-204ENST00000429629 CMTM4Q8IZR5 234 aa12.34□□□□□ -0.43
GARNL3-204ENST00000429629 OR4S1Q8NGB4 309 aa12.34□□□□□ -0.43
GARNL3-204ENST00000429629 UPRTQ96BW1 309 aa12.34□□□□□ -0.43
GARNL3-204ENST00000429629 BCL7BQ9BQE9 202 aa12.34□□□□□ -0.43
GARNL3-204ENST00000429629 URM1Q9BTM9 101 aaKnown RBP12.34□□□□□ -0.43
GARNL3-204ENST00000429629 BARHL1Q9BZE3 327 aa12.34□□□□□ -0.43
GARNL3-204ENST00000429629 SELENOIQ9C0D9 397 aa12.34□□□□□ -0.43
GARNL3-204ENST00000429629 RAB22AQ9UL26 194 aa12.34□□□□□ -0.43
GARNL3-204ENST00000429629 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP12.34□□□□□ -0.43
GARNL3-204ENST00000429629 A0A1W2PP11 408 aa12.33□□□□□ -0.44
GARNL3-204ENST00000429629 hADV38S2A0JD32 116 aa12.33□□□□□ -0.44
GARNL3-204ENST00000429629 SIRPB1O00241 398 aa12.33□□□□□ -0.44
GARNL3-204ENST00000429629 CRLF1O75462 422 aa12.33□□□□□ -0.44
GARNL3-204ENST00000429629 GABARAPO95166 117 aa12.33□□□□□ -0.44
GARNL3-204ENST00000429629 MMP9P14780 707 aa12.33□□□□□ -0.44
GARNL3-204ENST00000429629 RAB6AP20340 208 aa12.33□□□□□ -0.44
GARNL3-204ENST00000429629 P2RX3P56373 397 aa12.33□□□□□ -0.44
GARNL3-204ENST00000429629 OR10A3P58181 314 aa12.33□□□□□ -0.44
GARNL3-204ENST00000429629 RBM39Q14498 530 aaKnown RBP12.33□□□□□ -0.44
GARNL3-204ENST00000429629 TAF9Q16594 264 aa12.33□□□□□ -0.44
GARNL3-204ENST00000429629 TMEM200BQ69YZ2 307 aa12.33□□□□□ -0.44
GARNL3-204ENST00000429629 NR2C2APQ86WQ0 139 aa12.33□□□□□ -0.44
GARNL3-204ENST00000429629 OR51D1Q8NGF3 324 aa12.33□□□□□ -0.44
GARNL3-204ENST00000429629 H1FXQ92522 213 aaKnown RBP12.33□□□□□ -0.44
GARNL3-204ENST00000429629 TMEM59Q9BXS4 323 aa12.33□□□□□ -0.44
GARNL3-204ENST00000429629 hCG_1809904A0A1W2PP81 198 aa12.32□□□□□ -0.44
GARNL3-204ENST00000429629 A0A1W2PPE2 198 aa12.32□□□□□ -0.44
GARNL3-204ENST00000429629 A0A1W2PR64 198 aa12.32□□□□□ -0.44
GARNL3-204ENST00000429629 A0A1W2PRV1 198 aa12.32□□□□□ -0.44
GARNL3-204ENST00000429629 POM121CA8CG34 1229 aa12.32□□□□□ -0.44
GARNL3-204ENST00000429629 FSHBP01225 129 aa12.32□□□□□ -0.44
GARNL3-204ENST00000429629 SNU13P55769 128 aaKnown RBP12.32□□□□□ -0.44
GARNL3-204ENST00000429629 SCN1BQ07699 218 aa12.32□□□□□ -0.44
GARNL3-204ENST00000429629 SCGB2A2Q13296 93 aa12.32□□□□□ -0.44
GARNL3-204ENST00000429629 UNC119Q13432 240 aa12.32□□□□□ -0.44
GARNL3-204ENST00000429629 BLMHQ13867 455 aa12.32□□□□□ -0.44
GARNL3-204ENST00000429629 PDCD1Q15116 288 aa12.32□□□□□ -0.44
GARNL3-204ENST00000429629 PAN3Q58A45 887 aaKnown RBP12.32□□□□□ -0.44
GARNL3-204ENST00000429629 SLC35E4Q6ICL7 350 aa12.32□□□□□ -0.44
GARNL3-204ENST00000429629 SFXN4Q6P4A7 337 aa12.32□□□□□ -0.44
GARNL3-204ENST00000429629 METAP1DQ6UB28 335 aaPredicted RBP12.32□□□□□ -0.44
GARNL3-204ENST00000429629 C1orf229Q6ZS94 237 aaPredicted RBP12.32□□□□□ -0.44
GARNL3-204ENST00000429629 SLC16A12Q6ZSM3 486 aa12.32□□□□□ -0.44
GARNL3-204ENST00000429629 FGFRL1Q8N441 504 aa12.32□□□□□ -0.44
GARNL3-204ENST00000429629 SUMF2Q8NBJ7 301 aa12.32□□□□□ -0.44
GARNL3-204ENST00000429629 NANPQ8TBE9 248 aa12.32□□□□□ -0.44
GARNL3-204ENST00000429629 WDFY2Q96P53 400 aa12.32□□□□□ -0.44
GARNL3-204ENST00000429629 DPCDQ9BVM2 203 aaPredicted RBP12.32□□□□□ -0.44
GARNL3-204ENST00000429629 BEX2Q9BXY8 128 aa12.32□□□□□ -0.44
GARNL3-204ENST00000429629 SIRPDQ9H106 197 aa12.32□□□□□ -0.44
GARNL3-204ENST00000429629 BANF2Q9H503 90 aa12.32□□□□□ -0.44
GARNL3-204ENST00000429629 METTL8Q9H825 291 aaKnown RBP12.32□□□□□ -0.44
GARNL3-204ENST00000429629 OR6C3Q9NZP0 311 aa12.32□□□□□ -0.44
GARNL3-204ENST00000429629 UBE2J1Q9Y385 318 aaPredicted RBP12.32□□□□□ -0.44
GARNL3-204ENST00000429629 LINC00312Q9Y6C7 94 aa12.32□□□□□ -0.44
GARNL3-204ENST00000429629 TEP1Q99973 2627 aaKnown RBP12.31□□□□□ -0.44
GARNL3-204ENST00000429629 NSD1Q96L73 2696 aaPredicted RBP12.31□□□□□ -0.44
GARNL3-204ENST00000429629 MCRIP1C9JLW8 97 aa12.31□□□□□ -0.44
GARNL3-204ENST00000429629 INAFM1C9JVW0 142 aa12.31□□□□□ -0.44
GARNL3-204ENST00000429629 PDCD6O75340 191 aa12.31□□□□□ -0.44
GARNL3-204ENST00000429629 MPIG6BO95866 241 aa12.31□□□□□ -0.44
GARNL3-204ENST00000429629 AVPP01185 164 aa12.31□□□□□ -0.44
GARNL3-204ENST00000429629 PRTN3P24158 256 aa12.31□□□□□ -0.44
GARNL3-204ENST00000429629 TMBIM6P55061 237 aa12.31□□□□□ -0.44
GARNL3-204ENST00000429629 DYNC1I2Q13409 638 aaKnown RBP12.31□□□□□ -0.44
GARNL3-204ENST00000429629 P2RY14Q15391 338 aa12.31□□□□□ -0.44
GARNL3-204ENST00000429629 CTF1Q16619 201 aa12.31□□□□□ -0.44
GARNL3-204ENST00000429629 CHRFAM7AQ494W8 412 aa12.31□□□□□ -0.44
GARNL3-204ENST00000429629 HES5Q5TA89 166 aa12.31□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms