RNA–Protein interactions for RNA: ENST00000428680.6

CNOT4-206, Transcript of CCR4-NOT transcription complex subunit 4, humanhuman

TSL 1 (best) BASIC

Gene CNOT4, Length 4,642 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT4-206ENST00000428680 NGFRP08138 427 aa6.29□□□□□ -1.4
CNOT4-206ENST00000428680 CD99P14209 185 aa6.29□□□□□ -1.4
CNOT4-206ENST00000428680 SLC25A1P53007 311 aa6.29□□□□□ -1.4
CNOT4-206ENST00000428680 RPS25P62851 125 aaKnown RBP6.29□□□□□ -1.4
CNOT4-206ENST00000428680 PLAURQ03405 335 aa6.29□□□□□ -1.4
CNOT4-206ENST00000428680 ZNF85Q03923 595 aa6.29□□□□□ -1.4
CNOT4-206ENST00000428680 OR5I1Q13606 314 aa6.29□□□□□ -1.4
CNOT4-206ENST00000428680 HLXQ14774 488 aaPredicted RBP6.29□□□□□ -1.4
CNOT4-206ENST00000428680 STEAP1BQ6NZ63 245 aa6.29□□□□□ -1.4
CNOT4-206ENST00000428680 C12orf43Q96C57 262 aaKnown RBP6.29□□□□□ -1.4
CNOT4-206ENST00000428680 LINC00052Q96N35 136 aa6.29□□□□□ -1.4
CNOT4-206ENST00000428680 C20orf85Q9H1P6 137 aa6.29□□□□□ -1.4
CNOT4-206ENST00000428680 XKRY2A2RUG3 117 aa6.29□□□□□ -1.4
CNOT4-206ENST00000428680 K7EPK0 472 aa6.29□□□□□ -1.4
CNOT4-206ENST00000428680 HPGDSO60760 199 aa6.29□□□□□ -1.4
CNOT4-206ENST00000428680 ZNF354AO60765 605 aaPredicted RBP6.29□□□□□ -1.4
CNOT4-206ENST00000428680 SLC25A16P16260 332 aa6.29□□□□□ -1.4
CNOT4-206ENST00000428680 POLR2IP36954 125 aaKnown RBP6.29□□□□□ -1.4
CNOT4-206ENST00000428680 LSM11P83369 360 aaKnown RBP eCLIP6.29□□□□□ -1.4
CNOT4-206ENST00000428680 EBLN2Q6P2I7 272 aa6.29□□□□□ -1.4
CNOT4-206ENST00000428680 ATG4DQ86TL0 474 aaPredicted RBP6.29□□□□□ -1.4
CNOT4-206ENST00000428680 CCDC28AQ8IWP9 274 aa6.29□□□□□ -1.4
CNOT4-206ENST00000428680 FAM71E2Q8N5Q1 922 aa6.29□□□□□ -1.4
CNOT4-206ENST00000428680 LILRB4Q8NHJ6 448 aa6.29□□□□□ -1.4
CNOT4-206ENST00000428680 Q8WTZ3 238 aa6.29□□□□□ -1.4
CNOT4-206ENST00000428680 MAFIPQ8WZ33 124 aa6.29□□□□□ -1.4
CNOT4-206ENST00000428680 ERGIC1Q969X5 290 aa6.29□□□□□ -1.4
CNOT4-206ENST00000428680 ZNF764Q96H86 408 aaPredicted RBP6.29□□□□□ -1.4
CNOT4-206ENST00000428680 OR51I2Q9H344 312 aa6.29□□□□□ -1.4
CNOT4-206ENST00000428680 SCPEP1Q9HB40 452 aa6.29□□□□□ -1.4
CNOT4-206ENST00000428680 FAM53CQ9NYF3 392 aa6.29□□□□□ -1.4
CNOT4-206ENST00000428680 PIPOXQ9P0Z9 390 aa6.29□□□□□ -1.4
CNOT4-206ENST00000428680 NUP214P35658 2090 aaPredicted RBP6.28□□□□□ -1.4
CNOT4-206ENST00000428680 MYOFQ9NZM1 2061 aa6.28□□□□□ -1.4
CNOT4-206ENST00000428680 H3BMQ9 156 aa6.28□□□□□ -1.4
CNOT4-206ENST00000428680 FGF2P09038 288 aa6.28□□□□□ -1.4
CNOT4-206ENST00000428680 RFPL3SP0C7P2 107 aa6.28□□□□□ -1.4
CNOT4-206ENST00000428680 ADRA2CP18825 462 aa6.28□□□□□ -1.4
CNOT4-206ENST00000428680 KIR2DS2P43631 304 aa6.28□□□□□ -1.4
CNOT4-206ENST00000428680 DAPP51397 102 aa6.28□□□□□ -1.4
CNOT4-206ENST00000428680 EFNA4P52798 201 aa6.28□□□□□ -1.4
CNOT4-206ENST00000428680 NCS1P62166 190 aa6.28□□□□□ -1.4
CNOT4-206ENST00000428680 CLINT1Q14677 625 aa6.28□□□□□ -1.4
CNOT4-206ENST00000428680 MRPL14Q6P1L8 145 aaKnown RBP6.28□□□□□ -1.4
CNOT4-206ENST00000428680 ACOT7LQ6ZUV0 252 aa6.28□□□□□ -1.4
CNOT4-206ENST00000428680 OR8H3Q8N146 312 aa6.28□□□□□ -1.4
CNOT4-206ENST00000428680 ASB10Q8WXI3 467 aa6.28□□□□□ -1.4
CNOT4-206ENST00000428680 R3HDM4Q96D70 268 aa6.28□□□□□ -1.4
CNOT4-206ENST00000428680 ARHGDIGQ99819 225 aa6.28□□□□□ -1.4
CNOT4-206ENST00000428680 THAP7Q9BT49 309 aaPredicted RBP6.28□□□□□ -1.4
CNOT4-206ENST00000428680 PLA2G12AQ9BZM1 189 aa6.28□□□□□ -1.4
CNOT4-206ENST00000428680 SLC25A22Q9H936 323 aa6.28□□□□□ -1.4
CNOT4-206ENST00000428680 TMEM106BQ9NUM4 274 aa6.28□□□□□ -1.4
CNOT4-206ENST00000428680 SIGLEC7Q9Y286 467 aa6.28□□□□□ -1.4
CNOT4-206ENST00000428680 TRANK1O15050 2925 aa6.28□□□□□ -1.4
CNOT4-206ENST00000428680 DFFBO76075 338 aa6.28□□□□□ -1.4
CNOT4-206ENST00000428680 THBDP07204 575 aa6.28□□□□□ -1.4
CNOT4-206ENST00000428680 MGST1P10620 155 aaKnown RBP6.28□□□□□ -1.4
CNOT4-206ENST00000428680 RELBQ01201 579 aa6.28□□□□□ -1.4
CNOT4-206ENST00000428680 DEFA5Q01523 94 aa6.28□□□□□ -1.4
CNOT4-206ENST00000428680 SMN1Q16637 294 aaKnown RBP6.28□□□□□ -1.4
CNOT4-206ENST00000428680 CNPY1Q3B7I2 92 aa6.28□□□□□ -1.4
CNOT4-206ENST00000428680 PHYHD1Q5SRE7 291 aa6.28□□□□□ -1.4
CNOT4-206ENST00000428680 DESI1Q6ICB0 168 aa6.28□□□□□ -1.4
CNOT4-206ENST00000428680 DLEU7Q6UYE1 221 aa6.28□□□□□ -1.4
CNOT4-206ENST00000428680 UBE3DQ7Z6J8 389 aa6.28□□□□□ -1.4
CNOT4-206ENST00000428680 GDPD1Q8N9F7 314 aa6.28□□□□□ -1.4
CNOT4-206ENST00000428680 C9orf106Q8NAJ2 232 aa6.28□□□□□ -1.4
CNOT4-206ENST00000428680 TSPAN32Q96QS1 320 aa6.28□□□□□ -1.4
CNOT4-206ENST00000428680 ZNF225Q9UK10 706 aa6.28□□□□□ -1.4
CNOT4-206ENST00000428680 SCN8AQ9UQD0 1980 aa6.28□□□□□ -1.4
CNOT4-206ENST00000428680 TMEM235A6NFC5 223 aa6.28□□□□□ -1.4
CNOT4-206ENST00000428680 M0QYG6 137 aa6.28□□□□□ -1.4
CNOT4-206ENST00000428680 SULT1C2O00338 296 aa6.28□□□□□ -1.4
CNOT4-206ENST00000428680 TO15178 435 aa6.28□□□□□ -1.4
CNOT4-206ENST00000428680 GSTZ1O43708 216 aaPredicted RBP6.28□□□□□ -1.4
CNOT4-206ENST00000428680 PDCD6O75340 191 aa6.28□□□□□ -1.4
CNOT4-206ENST00000428680 PTP4A3O75365 173 aa6.28□□□□□ -1.4
CNOT4-206ENST00000428680 SNRNP70P08621 437 aaKnown RBP6.28□□□□□ -1.4
CNOT4-206ENST00000428680 EPHA2P29317 976 aa6.28□□□□□ -1.4
CNOT4-206ENST00000428680 AARDQ4LEZ3 155 aa6.28□□□□□ -1.4
CNOT4-206ENST00000428680 FAM27BQ5VT28 67 aa6.28□□□□□ -1.4
CNOT4-206ENST00000428680 DYNC2LI1Q8TCX1 351 aa6.28□□□□□ -1.4
CNOT4-206ENST00000428680 IMMP1LQ96LU5 166 aa6.28□□□□□ -1.4
CNOT4-206ENST00000428680 ZNF75AQ96N20 296 aa6.28□□□□□ -1.4
CNOT4-206ENST00000428680 DDOQ99489 341 aa6.28□□□□□ -1.4
CNOT4-206ENST00000428680 SLC17A5Q9NRA2 495 aa6.28□□□□□ -1.4
CNOT4-206ENST00000428680 DTX4Q9Y2E6 619 aa6.28□□□□□ -1.4
CNOT4-206ENST00000428680 ZFHX3Q15911 3703 aa6.28□□□□□ -1.4
CNOT4-206ENST00000428680 CACNA1DQ01668 2161 aa6.28□□□□□ -1.4
CNOT4-206ENST00000428680 IGHV3-72A0A0B4J1Y9 119 aa6.27□□□□□ -1.41
CNOT4-206ENST00000428680 A0A1W2PS18 150 aa6.27□□□□□ -1.41
CNOT4-206ENST00000428680 K7N7A8 449 aa6.27□□□□□ -1.41
CNOT4-206ENST00000428680 CYB5R3P00387 301 aaPredicted RBP6.27□□□□□ -1.41
CNOT4-206ENST00000428680 TBCEQ15813 527 aaPredicted RBP6.27□□□□□ -1.41
CNOT4-206ENST00000428680 C20orf196Q8IYI0 205 aa6.27□□□□□ -1.41
CNOT4-206ENST00000428680 OR52I1Q8NGK6 324 aa6.27□□□□□ -1.41
CNOT4-206ENST00000428680 ZNF420Q8TAQ5 688 aaPredicted RBP6.27□□□□□ -1.41
CNOT4-206ENST00000428680 FRZBQ92765 325 aa6.27□□□□□ -1.41
CNOT4-206ENST00000428680 MAP6Q96JE9 813 aa6.27□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 42.5 ms