RNA–Protein interactions for RNA: ENST00000427461.1

LSG1-202, Transcript of large 60S subunit nuclear export GTPase 1, humanhuman

TSL 5

Gene LSG1, Length 755 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSG1-202ENST00000427461 CD300AQ9UGN4 299 aa6.91□□□□□ -1.3
LSG1-202ENST00000427461 ZNF107Q9UII5 783 aaPredicted RBP6.91□□□□□ -1.3
LSG1-202ENST00000427461 PSG11Q9UQ72 335 aa6.91□□□□□ -1.3
LSG1-202ENST00000427461 PIGLQ9Y2B2 252 aa6.91□□□□□ -1.3
LSG1-202ENST00000427461 MRPS28Q9Y2Q9 187 aaKnown RBP6.91□□□□□ -1.3
LSG1-202ENST00000427461 SIRPB1O00241 398 aa6.9□□□□□ -1.3
LSG1-202ENST00000427461 HSD17B6O14756 317 aa6.9□□□□□ -1.3
LSG1-202ENST00000427461 ZNF682O95780 498 aa6.9□□□□□ -1.3
LSG1-202ENST00000427461 H1F0P07305 194 aaKnown RBP6.9□□□□□ -1.3
LSG1-202ENST00000427461 ZNF91Q05481 1191 aa6.9□□□□□ -1.3
LSG1-202ENST00000427461 TNFRSF9Q07011 255 aa6.9□□□□□ -1.3
LSG1-202ENST00000427461 MFGE8Q08431 387 aaPredicted RBP6.9□□□□□ -1.3
LSG1-202ENST00000427461 LTC4SQ16873 150 aa6.9□□□□□ -1.3
LSG1-202ENST00000427461 SLX4IPQ5VYV7 408 aa6.9□□□□□ -1.3
LSG1-202ENST00000427461 LCN12Q6JVE5 192 aa6.9□□□□□ -1.3
LSG1-202ENST00000427461 TRPM8Q7Z2W7 1104 aa6.9□□□□□ -1.3
LSG1-202ENST00000427461 COMMD2Q86X83 199 aa6.9□□□□□ -1.3
LSG1-202ENST00000427461 HIST2H2ABQ8IUE6 130 aaPredicted RBP6.9□□□□□ -1.3
LSG1-202ENST00000427461 ERI1Q8IV48 349 aaKnown RBP6.9□□□□□ -1.3
LSG1-202ENST00000427461 IZUMO1Q8IYV9 350 aa6.9□□□□□ -1.3
LSG1-202ENST00000427461 Q8N1X5 172 aa6.9□□□□□ -1.3
LSG1-202ENST00000427461 OR52J3Q8NH60 311 aa6.9□□□□□ -1.3
LSG1-202ENST00000427461 RNF183Q96D59 192 aa6.9□□□□□ -1.3
LSG1-202ENST00000427461 CEP19Q96LK0 163 aa6.9□□□□□ -1.3
LSG1-202ENST00000427461 CADM1Q9BY67 442 aaKnown RBP6.9□□□□□ -1.3
LSG1-202ENST00000427461 CCDC134Q9H6E4 229 aa6.9□□□□□ -1.3
LSG1-202ENST00000427461 PARP11Q9NR21 331 aa6.9□□□□□ -1.3
LSG1-202ENST00000427461 ZNF580Q9UK33 172 aa6.9□□□□□ -1.3
LSG1-202ENST00000427461 TRAV41A0A0B4J266 112 aa6.89□□□□□ -1.31
LSG1-202ENST00000427461 A0A1W2PN81 502 aa6.89□□□□□ -1.31
LSG1-202ENST00000427461 A0A1W2PRQ8 180 aa6.89□□□□□ -1.31
LSG1-202ENST00000427461 OR11H12B2RN74 326 aa6.89□□□□□ -1.31
LSG1-202ENST00000427461 GSC2O15499 205 aa6.89□□□□□ -1.31
LSG1-202ENST00000427461 IDH3BO43837 385 aa6.89□□□□□ -1.31
LSG1-202ENST00000427461 DIRAS1O95057 198 aa6.89□□□□□ -1.31
LSG1-202ENST00000427461 SPI1P17947 270 aa6.89□□□□□ -1.31
LSG1-202ENST00000427461 CHRNA7P36544 502 aa6.89□□□□□ -1.31
LSG1-202ENST00000427461 IL24Q13007 206 aa6.89□□□□□ -1.31
LSG1-202ENST00000427461 DGCR6Q14129 220 aa6.89□□□□□ -1.31
LSG1-202ENST00000427461 CRMP1Q14194 572 aa6.89□□□□□ -1.31
LSG1-202ENST00000427461 GALEQ14376 348 aa6.89□□□□□ -1.31
LSG1-202ENST00000427461 IFI44LQ53G44 452 aa6.89□□□□□ -1.31
LSG1-202ENST00000427461 LINC01590Q5TEZ4 76 aa6.89□□□□□ -1.31
LSG1-202ENST00000427461 ERICH5Q6P6B1 374 aa6.89□□□□□ -1.31
LSG1-202ENST00000427461 ZNF645Q8N7E2 425 aa6.89□□□□□ -1.31
LSG1-202ENST00000427461 TMEM104Q8NE00 496 aa6.89□□□□□ -1.31
LSG1-202ENST00000427461 OR51E1Q8TCB6 317 aa6.89□□□□□ -1.31
LSG1-202ENST00000427461 EMG1Q92979 244 aaKnown RBP6.89□□□□□ -1.31
LSG1-202ENST00000427461 UTP4Q969X6 686 aaKnown RBP6.89□□□□□ -1.31
LSG1-202ENST00000427461 TEAD3Q99594 435 aa6.89□□□□□ -1.31
LSG1-202ENST00000427461 PKIBQ9C010 78 aa6.89□□□□□ -1.31
LSG1-202ENST00000427461 EGLN3Q9H6Z9 239 aa6.89□□□□□ -1.31
LSG1-202ENST00000427461 SCRT2Q9NQ03 307 aa6.89□□□□□ -1.31
LSG1-202ENST00000427461 GPR84Q9NQS5 396 aa6.89□□□□□ -1.31
LSG1-202ENST00000427461 ETAA1Q9NY74 926 aa6.89□□□□□ -1.31
LSG1-202ENST00000427461 ENPP5Q9UJA9 477 aa6.89□□□□□ -1.31
LSG1-202ENST00000427461 ADAM30Q9UKF2 790 aa6.89□□□□□ -1.31
LSG1-202ENST00000427461 FAM230AA0A1W2PPH8 454 aa6.88□□□□□ -1.31
LSG1-202ENST00000427461 ODAMA1E959 279 aa6.88□□□□□ -1.31
LSG1-202ENST00000427461 ZNF729A6NN14 1252 aaPredicted RBP6.88□□□□□ -1.31
LSG1-202ENST00000427461 FXYD1O00168 92 aa6.88□□□□□ -1.31
LSG1-202ENST00000427461 DLGAP1O14490 977 aa6.88□□□□□ -1.31
LSG1-202ENST00000427461 EREGO14944 169 aa6.88□□□□□ -1.31
LSG1-202ENST00000427461 RGS16O15492 202 aaPredicted RBP6.88□□□□□ -1.31
LSG1-202ENST00000427461 MOSP00540 346 aa6.88□□□□□ -1.31
LSG1-202ENST00000427461 NPBWR2P48146 333 aa6.88□□□□□ -1.31
LSG1-202ENST00000427461 ZNF45Q02386 682 aa6.88□□□□□ -1.31
LSG1-202ENST00000427461 ZNF816Q0VGE8 651 aaPredicted RBP6.88□□□□□ -1.31
LSG1-202ENST00000427461 RAB40BQ12829 278 aa6.88□□□□□ -1.31
LSG1-202ENST00000427461 TRIM25Q14258 630 aaKnown RBP6.88□□□□□ -1.31
LSG1-202ENST00000427461 FKBP9P1Q75LS8 142 aa6.88□□□□□ -1.31
LSG1-202ENST00000427461 Q8N402 240 aa6.88□□□□□ -1.31
LSG1-202ENST00000427461 MINDY2Q8NBR6 621 aa6.88□□□□□ -1.31
LSG1-202ENST00000427461 OR9G4Q8NGQ1 327 aa6.88□□□□□ -1.31
LSG1-202ENST00000427461 OR10X1Q8NGY0 326 aa6.88□□□□□ -1.31
LSG1-202ENST00000427461 HAVCR2Q8TDQ0 301 aa6.88□□□□□ -1.31
LSG1-202ENST00000427461 THEM6Q8WUY1 208 aa6.88□□□□□ -1.31
LSG1-202ENST00000427461 COQ2Q96H96 371 aa6.88□□□□□ -1.31
LSG1-202ENST00000427461 INTS14Q96SY0 518 aa6.88□□□□□ -1.31
LSG1-202ENST00000427461 FUZQ9BT04 418 aa6.88□□□□□ -1.31
LSG1-202ENST00000427461 CCDC28BQ9BUN5 200 aa6.88□□□□□ -1.31
LSG1-202ENST00000427461 PPIL3Q9H2H8 161 aaKnown RBP6.88□□□□□ -1.31
LSG1-202ENST00000427461 ZCCHC4Q9H5U6 513 aa6.88□□□□□ -1.31
LSG1-202ENST00000427461 DCAF13Q9NV06 445 aaKnown RBP6.88□□□□□ -1.31
LSG1-202ENST00000427461 RBFOX1Q9NWB1 397 aaKnown RBP6.88□□□□□ -1.31
LSG1-202ENST00000427461 GLS2Q9UI32 602 aa6.88□□□□□ -1.31
LSG1-202ENST00000427461 ENPP4Q9Y6X5 453 aa6.88□□□□□ -1.31
LSG1-202ENST00000427461 IGKV1-27A0A075B6S5 117 aa6.87□□□□□ -1.31
LSG1-202ENST00000427461 A0A0U1RQV5 110 aa6.87□□□□□ -1.31
LSG1-202ENST00000427461 KBTBD11-OT1A0A1B0GTJ5 212 aa6.87□□□□□ -1.31
LSG1-202ENST00000427461 M0R2N4 97 aa6.87□□□□□ -1.31
LSG1-202ENST00000427461 CDK2AP2O75956 126 aa6.87□□□□□ -1.31
LSG1-202ENST00000427461 NDUFB8O95169 186 aa6.87□□□□□ -1.31
LSG1-202ENST00000427461 IGLV3-1P01715 115 aa6.87□□□□□ -1.31
LSG1-202ENST00000427461 GAPDHP04406 335 aaKnown RBP6.87□□□□□ -1.31
LSG1-202ENST00000427461 CSN3P07498 182 aa6.87□□□□□ -1.31
LSG1-202ENST00000427461 RHCEP18577 417 aa6.87□□□□□ -1.31
LSG1-202ENST00000427461 BLVRBP30043 206 aaPredicted RBP6.87□□□□□ -1.31
LSG1-202ENST00000427461 KLF10Q13118 480 aa6.87□□□□□ -1.31
LSG1-202ENST00000427461 CYLC2Q14093 348 aaPredicted RBP6.87□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms