RNA–Protein interactions for RNA: ENST00000426246.2

USP42-203, Transcript of ubiquitin specific peptidase 42, humanhuman

TSL 2

Gene USP42, Length 3,611 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP42-203ENST00000426246 A0A1W2PNU3 283 aaPredicted RBP11.59□□□□□ -0.55
USP42-203ENST00000426246 LY86O95711 162 aa11.59□□□□□ -0.55
USP42-203ENST00000426246 NKX2-1P43699 371 aaPredicted RBP11.59□□□□□ -0.55
USP42-203ENST00000426246 ZNF154Q13106 437 aa11.59□□□□□ -0.55
USP42-203ENST00000426246 ENDOGQ14249 297 aaKnown RBP11.59□□□□□ -0.55
USP42-203ENST00000426246 HAS2Q92819 552 aa11.59□□□□□ -0.55
USP42-203ENST00000426246 SYT3Q9BQG1 590 aa11.59□□□□□ -0.55
USP42-203ENST00000426246 SMCO4Q9NRQ5 59 aa11.59□□□□□ -0.55
USP42-203ENST00000426246 SLC7A10Q9NS82 523 aa11.59□□□□□ -0.55
USP42-203ENST00000426246 IGKV1-27A0A075B6S5 117 aa11.59□□□□□ -0.55
USP42-203ENST00000426246 F8VVB4 439 aa11.59□□□□□ -0.55
USP42-203ENST00000426246 F8VWA3 439 aa11.59□□□□□ -0.55
USP42-203ENST00000426246 IL2RAP01589 272 aa11.59□□□□□ -0.55
USP42-203ENST00000426246 CELA3AP09093 270 aa11.59□□□□□ -0.55
USP42-203ENST00000426246 ACTBL2Q562R1 376 aa11.59□□□□□ -0.55
USP42-203ENST00000426246 THNSL2Q86YJ6 484 aa11.59□□□□□ -0.55
USP42-203ENST00000426246 OR1F12Q8NHA8 337 aa11.59□□□□□ -0.55
USP42-203ENST00000426246 NDRG3Q9UGV2 375 aa11.59□□□□□ -0.55
USP42-203ENST00000426246 B4E171 279 aa11.58□□□□□ -0.56
USP42-203ENST00000426246 ZNF587BE7ETH6 402 aa11.58□□□□□ -0.56
USP42-203ENST00000426246 JTBO76095 146 aa11.58□□□□□ -0.56
USP42-203ENST00000426246 NGFP01138 241 aa11.58□□□□□ -0.56
USP42-203ENST00000426246 NTF4P34130 210 aa11.58□□□□□ -0.56
USP42-203ENST00000426246 TAGLN2P37802 199 aaKnown RBP11.58□□□□□ -0.56
USP42-203ENST00000426246 TSPAN7P41732 249 aa11.58□□□□□ -0.56
USP42-203ENST00000426246 UBE2KP61086 200 aa11.58□□□□□ -0.56
USP42-203ENST00000426246 RAB11AP62491 216 aa11.58□□□□□ -0.56
USP42-203ENST00000426246 PCOLCEQ15113 449 aa11.58□□□□□ -0.56
USP42-203ENST00000426246 STX12Q86Y82 276 aa11.58□□□□□ -0.56
USP42-203ENST00000426246 ZNF808Q8N4W9 903 aaPredicted RBP11.58□□□□□ -0.56
USP42-203ENST00000426246 C1orf147Q96MC9 270 aaPredicted RBP11.58□□□□□ -0.56
USP42-203ENST00000426246 TP53RKQ96S44 253 aa11.58□□□□□ -0.56
USP42-203ENST00000426246 CCL28Q9NRJ3 127 aa11.58□□□□□ -0.56
USP42-203ENST00000426246 AURKAIP1Q9NWT8 199 aaPredicted RBP11.58□□□□□ -0.56
USP42-203ENST00000426246 RCC2Q9P258 522 aaKnown RBP11.58□□□□□ -0.56
USP42-203ENST00000426246 FZR1Q9UM11 496 aa11.58□□□□□ -0.56
USP42-203ENST00000426246 WNK2Q9Y3S1 2297 aa11.58□□□□□ -0.56
USP42-203ENST00000426246 ZNF292O60281 2723 aa11.58□□□□□ -0.56
USP42-203ENST00000426246 SIRPB1O00241 398 aa11.58□□□□□ -0.56
USP42-203ENST00000426246 GALR2O43603 387 aaPredicted RBP11.58□□□□□ -0.56
USP42-203ENST00000426246 TUSC2O75896 110 aa11.58□□□□□ -0.56
USP42-203ENST00000426246 CST4P01036 141 aa11.58□□□□□ -0.56
USP42-203ENST00000426246 TFF1P04155 84 aa11.58□□□□□ -0.56
USP42-203ENST00000426246 TK1P04183 234 aa11.58□□□□□ -0.56
USP42-203ENST00000426246 SERPINE2P07093 398 aa11.58□□□□□ -0.56
USP42-203ENST00000426246 EIF1P41567 113 aaKnown RBP11.58□□□□□ -0.56
USP42-203ENST00000426246 CCL20P78556 96 aa11.58□□□□□ -0.56
USP42-203ENST00000426246 PSG4Q00888 419 aa11.58□□□□□ -0.56
USP42-203ENST00000426246 C9orf152Q5JTZ5 239 aa11.58□□□□□ -0.56
USP42-203ENST00000426246 HIST2H3AQ71DI3 136 aa11.58□□□□□ -0.56
USP42-203ENST00000426246 ZNF100Q8IYN0 542 aa11.58□□□□□ -0.56
USP42-203ENST00000426246 EXTL1Q92935 676 aa11.58□□□□□ -0.56
USP42-203ENST00000426246 CPNE4Q96A23 557 aaPredicted RBP11.58□□□□□ -0.56
USP42-203ENST00000426246 PHYHIPLQ96FC7 376 aa11.58□□□□□ -0.56
USP42-203ENST00000426246 CHCHD2Q9Y6H1 151 aaPredicted RBP11.58□□□□□ -0.56
USP42-203ENST00000426246 A0A0U1RQK1 487 aa11.58□□□□□ -0.56
USP42-203ENST00000426246 RAB19A4D1S5 217 aa11.58□□□□□ -0.56
USP42-203ENST00000426246 GRPP07492 148 aa11.58□□□□□ -0.56
USP42-203ENST00000426246 MSX1P28360 303 aa11.58□□□□□ -0.56
USP42-203ENST00000426246 AKR1C8PQ5T2L2 129 aa11.58□□□□□ -0.56
USP42-203ENST00000426246 POC1AQ8NBT0 407 aa11.58□□□□□ -0.56
USP42-203ENST00000426246 SPRY4Q9C004 299 aa11.58□□□□□ -0.56
USP42-203ENST00000426246 C19orf12Q9NSK7 152 aa11.58□□□□□ -0.56
USP42-203ENST00000426246 ATPIF1Q9UII2 106 aa11.58□□□□□ -0.56
USP42-203ENST00000426246 HDGFL3Q9Y3E1 203 aa11.58□□□□□ -0.56
USP42-203ENST00000426246 SERPINE3A8MV23 424 aa11.57□□□□□ -0.56
USP42-203ENST00000426246 ZNF732B4DXR9 585 aa11.57□□□□□ -0.56
USP42-203ENST00000426246 FCGR3AP08637 254 aa11.57□□□□□ -0.56
USP42-203ENST00000426246 BCL3P20749 454 aa11.57□□□□□ -0.56
USP42-203ENST00000426246 SUCLG1P53597 346 aaKnown RBP11.57□□□□□ -0.56
USP42-203ENST00000426246 SKA3Q8IX90 412 aa11.57□□□□□ -0.56
USP42-203ENST00000426246 GCNT2Q8N0V5 402 aa11.57□□□□□ -0.56
USP42-203ENST00000426246 GAPTQ8N292 157 aa11.57□□□□□ -0.56
USP42-203ENST00000426246 SLC30A7Q8NEW0 376 aa11.57□□□□□ -0.56
USP42-203ENST00000426246 THOC3Q96J01 351 aaKnown RBP11.57□□□□□ -0.56
USP42-203ENST00000426246 CHST5Q9GZS9 411 aa11.57□□□□□ -0.56
USP42-203ENST00000426246 DEFB127Q9H1M4 99 aa11.57□□□□□ -0.56
USP42-203ENST00000426246 UFSP2Q9NUQ7 469 aa11.57□□□□□ -0.56
USP42-203ENST00000426246 HS3ST3B1Q9Y662 390 aa11.57□□□□□ -0.56
USP42-203ENST00000426246 IGKV1-12A0A0C4DH73 117 aa11.57□□□□□ -0.56
USP42-203ENST00000426246 LOC390937A0A1W2PQ73 354 aa11.57□□□□□ -0.56
USP42-203ENST00000426246 H0YL77 283 aa11.57□□□□□ -0.56
USP42-203ENST00000426246 OR2C1O95371 312 aa11.57□□□□□ -0.56
USP42-203ENST00000426246 IGKV1D-12P01611 117 aa11.57□□□□□ -0.56
USP42-203ENST00000426246 CALCRP30988 508 aa11.57□□□□□ -0.56
USP42-203ENST00000426246 SPEM2Q0P670 501 aa11.57□□□□□ -0.56
USP42-203ENST00000426246 ZP4Q12836 540 aa11.57□□□□□ -0.56
USP42-203ENST00000426246 CNN3Q15417 329 aaKnown RBP11.57□□□□□ -0.56
USP42-203ENST00000426246 DNM1P46Q6ZS02 220 aa11.57□□□□□ -0.56
USP42-203ENST00000426246 LRP11Q86VZ4 500 aa11.57□□□□□ -0.56
USP42-203ENST00000426246 S100PBPQ96BU1 408 aa11.57□□□□□ -0.56
USP42-203ENST00000426246 SDSLQ96GA7 329 aa11.57□□□□□ -0.56
USP42-203ENST00000426246 WFDC1Q9HC57 220 aa11.57□□□□□ -0.56
USP42-203ENST00000426246 OSGIN2Q9Y236 505 aa11.57□□□□□ -0.56
USP42-203ENST00000426246 FAM157CP0CG43 387 aa11.56□□□□□ -0.56
USP42-203ENST00000426246 PTGDSP41222 190 aa11.56□□□□□ -0.56
USP42-203ENST00000426246 GSK3AP49840 483 aa11.56□□□□□ -0.56
USP42-203ENST00000426246 KIAA0141Q14154 515 aaPredicted RBP11.56□□□□□ -0.56
USP42-203ENST00000426246 OR2T2Q6IF00 324 aa11.56□□□□□ -0.56
USP42-203ENST00000426246 FIP1L1Q6UN15 594 aaKnown RBP11.56□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 45.8 ms