RNA–Protein interactions for RNA: ENST00000425413.5

UBR4-207, Transcript of ubiquitin protein ligase E3 component n-recognin 4, humanhuman

TSL 2

Gene UBR4, Length 2,954 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR4-207ENST00000425413 ADAT1Q9BUB4 502 aaKnown RBP9.92□□□□□ -0.82
UBR4-207ENST00000425413 GLS2Q9UI32 602 aa9.92□□□□□ -0.82
UBR4-207ENST00000425413 KCNIP3Q9Y2W7 256 aa9.92□□□□□ -0.82
UBR4-207ENST00000425413 MED12LQ86YW9 2145 aa9.91□□□□□ -0.82
UBR4-207ENST00000425413 MKXQ8IYA7 352 aa9.91□□□□□ -0.82
UBR4-207ENST00000425413 PRR18Q8N4B5 295 aa9.91□□□□□ -0.82
UBR4-207ENST00000425413 SUMF1Q8NBK3 374 aa9.91□□□□□ -0.82
UBR4-207ENST00000425413 MARC2Q969Z3 335 aa9.91□□□□□ -0.82
UBR4-207ENST00000425413 IP6K3Q96PC2 410 aa9.91□□□□□ -0.82
UBR4-207ENST00000425413 TRIB1Q96RU8 372 aa9.91□□□□□ -0.82
UBR4-207ENST00000425413 TSNAXQ99598 290 aaKnown RBP9.91□□□□□ -0.82
UBR4-207ENST00000425413 NAA60Q9H7X0 242 aa9.91□□□□□ -0.82
UBR4-207ENST00000425413 ANKRD30BLA7E2S9 258 aa9.91□□□□□ -0.82
UBR4-207ENST00000425413 TNFSF12O43508 249 aa9.91□□□□□ -0.82
UBR4-207ENST00000425413 NXPH3O95157 252 aa9.91□□□□□ -0.82
UBR4-207ENST00000425413 ASCL1P50553 236 aa9.91□□□□□ -0.82
UBR4-207ENST00000425413 ZNF169Q14929 603 aaPredicted RBP9.91□□□□□ -0.82
UBR4-207ENST00000425413 PLEKHN1Q494U1 663 aaPredicted RBP9.91□□□□□ -0.82
UBR4-207ENST00000425413 FBXW9Q5XUX1 488 aa9.91□□□□□ -0.82
UBR4-207ENST00000425413 TMEM88Q6PEY1 159 aa9.91□□□□□ -0.82
UBR4-207ENST00000425413 DHRS11Q6UWP2 260 aa9.91□□□□□ -0.82
UBR4-207ENST00000425413 EIF4E3Q8N5X7 224 aaKnown RBP9.91□□□□□ -0.82
UBR4-207ENST00000425413 OR1K1Q8NGR3 316 aa9.91□□□□□ -0.82
UBR4-207ENST00000425413 MEMO1Q9Y316 297 aa9.91□□□□□ -0.82
UBR4-207ENST00000425413 TRBV6-7A0A0A0MS04 114 aa9.9□□□□□ -0.82
UBR4-207ENST00000425413 GPR31O00270 319 aa9.9□□□□□ -0.82
UBR4-207ENST00000425413 ACTL6AO96019 429 aa9.9□□□□□ -0.82
UBR4-207ENST00000425413 TNFSF10P50591 281 aa9.9□□□□□ -0.82
UBR4-207ENST00000425413 ALKBH6Q3KRA9 238 aa9.9□□□□□ -0.82
UBR4-207ENST00000425413 NRN1LQ496H8 165 aa9.9□□□□□ -0.82
UBR4-207ENST00000425413 TMEM178AQ8NBL3 297 aa9.9□□□□□ -0.82
UBR4-207ENST00000425413 BSCL2Q96G97 398 aaPredicted RBP9.9□□□□□ -0.82
UBR4-207ENST00000425413 PCDHB16Q9NRJ7 776 aa9.9□□□□□ -0.82
UBR4-207ENST00000425413 IL36GQ9NZH8 169 aa9.9□□□□□ -0.82
UBR4-207ENST00000425413 K7EPK0 472 aa9.9□□□□□ -0.82
UBR4-207ENST00000425413 TOR1AO14656 332 aa9.9□□□□□ -0.82
UBR4-207ENST00000425413 AGPAT2O15120 278 aa9.9□□□□□ -0.82
UBR4-207ENST00000425413 PPYP01298 95 aa9.9□□□□□ -0.82
UBR4-207ENST00000425413 CCDC36Q8IYA8 594 aa9.9□□□□□ -0.82
UBR4-207ENST00000425413 FAM71E2Q8N5Q1 922 aa9.9□□□□□ -0.82
UBR4-207ENST00000425413 IL1F10Q8WWZ1 152 aa9.9□□□□□ -0.82
UBR4-207ENST00000425413 CNTNAP3BQ96NU0 1288 aa9.9□□□□□ -0.82
UBR4-207ENST00000425413 TP53RKQ96S44 253 aa9.9□□□□□ -0.82
UBR4-207ENST00000425413 CNTNAP3Q9BZ76 1288 aa9.9□□□□□ -0.82
UBR4-207ENST00000425413 NKX6-2Q9C056 277 aaPredicted RBP9.9□□□□□ -0.82
UBR4-207ENST00000425413 HRH4Q9H3N8 390 aa9.9□□□□□ -0.82
UBR4-207ENST00000425413 ZNF292O60281 2723 aa9.9□□□□□ -0.83
UBR4-207ENST00000425413 ZNF705EA8MWA4 302 aaPredicted RBP9.9□□□□□ -0.83
UBR4-207ENST00000425413 HSD17B6O14756 317 aa9.9□□□□□ -0.83
UBR4-207ENST00000425413 AGFG2O95081 481 aa9.9□□□□□ -0.83
UBR4-207ENST00000425413 F12P00748 615 aaPredicted RBP9.9□□□□□ -0.83
UBR4-207ENST00000425413 HKR1P10072 659 aa9.9□□□□□ -0.83
UBR4-207ENST00000425413 RPL12P30050 165 aaKnown RBP9.9□□□□□ -0.83
UBR4-207ENST00000425413 SRSF3P84103 164 aaKnown RBP9.9□□□□□ -0.83
UBR4-207ENST00000425413 TMEM187Q14656 261 aa9.9□□□□□ -0.83
UBR4-207ENST00000425413 SMCO1Q147U7 214 aa9.9□□□□□ -0.83
UBR4-207ENST00000425413 C20orf204Q6ZNR8 217 aa9.9□□□□□ -0.83
UBR4-207ENST00000425413 OR52M1Q8NGK5 317 aa9.9□□□□□ -0.83
UBR4-207ENST00000425413 GLYATL2Q8WU03 294 aa9.9□□□□□ -0.83
UBR4-207ENST00000425413 BCL2L2Q92843 193 aaPredicted RBP9.9□□□□□ -0.83
UBR4-207ENST00000425413 FAM117AQ9C073 453 aa9.9□□□□□ -0.83
UBR4-207ENST00000425413 OR2J1Q9GZK6 312 aa9.9□□□□□ -0.83
UBR4-207ENST00000425413 TREM1Q9NP99 234 aa9.9□□□□□ -0.83
UBR4-207ENST00000425413 FAM86C1Q9NVL1 165 aa9.9□□□□□ -0.83
UBR4-207ENST00000425413 AKAP13Q12802 2813 aa9.9□□□□□ -0.83
UBR4-207ENST00000425413 KIAA2026Q5HYC2 2103 aa9.89□□□□□ -0.83
UBR4-207ENST00000425413 ESPL1Q14674 2120 aa9.89□□□□□ -0.83
UBR4-207ENST00000425413 DNASE2O00115 360 aaPredicted RBP9.89□□□□□ -0.83
UBR4-207ENST00000425413 MBPP02686 304 aaPredicted RBP9.89□□□□□ -0.83
UBR4-207ENST00000425413 PET100P0DJ07 73 aa9.89□□□□□ -0.83
UBR4-207ENST00000425413 ZNF44P15621 663 aa9.89□□□□□ -0.83
UBR4-207ENST00000425413 ID4P47928 161 aa9.89□□□□□ -0.83
UBR4-207ENST00000425413 FGF12P61328 243 aa9.89□□□□□ -0.83
UBR4-207ENST00000425413 IL15RAQ13261 267 aa9.89□□□□□ -0.83
UBR4-207ENST00000425413 PHYHIPLQ96FC7 376 aa9.89□□□□□ -0.83
UBR4-207ENST00000425413 SLC5A7Q9GZV3 580 aa9.89□□□□□ -0.83
UBR4-207ENST00000425413 PIGMQ9H3S5 423 aa9.89□□□□□ -0.83
UBR4-207ENST00000425413 FZR1Q9UM11 496 aa9.89□□□□□ -0.83
UBR4-207ENST00000425413 PIEZO2Q9H5I5 2752 aa9.89□□□□□ -0.83
UBR4-207ENST00000425413 ICE1Q9Y2F5 2266 aa9.89□□□□□ -0.83
UBR4-207ENST00000425413 IGKV1D-13A0A0B4J2D9 117 aa9.89□□□□□ -0.83
UBR4-207ENST00000425413 MEX3AA1L020 520 aaKnown RBP9.89□□□□□ -0.83
UBR4-207ENST00000425413 IGKV1-13P0DP09 117 aa9.89□□□□□ -0.83
UBR4-207ENST00000425413 DEFB109BQ30KR1 87 aa9.89□□□□□ -0.83
UBR4-207ENST00000425413 TMEM268Q5VZI3 342 aa9.89□□□□□ -0.83
UBR4-207ENST00000425413 TMEM211Q6ICI0 200 aa9.89□□□□□ -0.83
UBR4-207ENST00000425413 FAM122CQ6P4D5 195 aa9.89□□□□□ -0.83
UBR4-207ENST00000425413 CXorf67Q86X51 503 aaPredicted RBP9.89□□□□□ -0.83
UBR4-207ENST00000425413 OR5P3Q8WZ94 311 aa9.89□□□□□ -0.83
UBR4-207ENST00000425413 ERGIC1Q969X5 290 aa9.89□□□□□ -0.83
UBR4-207ENST00000425413 MOB3AQ96BX8 217 aa9.89□□□□□ -0.83
UBR4-207ENST00000425413 TECTBQ96PL2 329 aa9.89□□□□□ -0.83
UBR4-207ENST00000425413 DNTTIP1Q9H147 329 aa9.89□□□□□ -0.83
UBR4-207ENST00000425413 FBXL17Q9UF56 701 aa9.89□□□□□ -0.83
UBR4-207ENST00000425413 MED19A0JLT2 244 aaPredicted RBP9.88□□□□□ -0.83
UBR4-207ENST00000425413 ABCD4O14678 606 aa9.88□□□□□ -0.83
UBR4-207ENST00000425413 ECI1P42126 302 aa9.88□□□□□ -0.83
UBR4-207ENST00000425413 UBE2NP61088 152 aaKnown RBP9.88□□□□□ -0.83
UBR4-207ENST00000425413 HERPUD1Q15011 391 aa9.88□□□□□ -0.83
UBR4-207ENST00000425413 STK11Q15831 433 aa9.88□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 44.4 ms