RNA–Protein interactions for RNA: ENST00000424478.5

PRPF39-202, Transcript of pre-mRNA processing factor 39, humanhuman

TSL 2

Gene PRPF39, Length 3,174 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF39-202ENST00000424478 OR56B1Q8NGI3 324 aa11.2□□□□□ -0.62
PRPF39-202ENST00000424478 LURAP1Q96LR2 239 aa11.2□□□□□ -0.62
PRPF39-202ENST00000424478 SDHCQ99643 169 aaPredicted RBP11.2□□□□□ -0.62
PRPF39-202ENST00000424478 DPCDQ9BVM2 203 aaPredicted RBP11.2□□□□□ -0.62
PRPF39-202ENST00000424478 CHODLQ9H9P2 273 aa11.2□□□□□ -0.62
PRPF39-202ENST00000424478 DIABLOQ9NR28 239 aa11.2□□□□□ -0.62
PRPF39-202ENST00000424478 FBLN5Q9UBX5 448 aa11.2□□□□□ -0.62
PRPF39-202ENST00000424478 KLK11Q9UBX7 282 aa11.2□□□□□ -0.62
PRPF39-202ENST00000424478 CEACAM18A8MTB9 384 aa11.2□□□□□ -0.62
PRPF39-202ENST00000424478 SH2D1BO14796 132 aa11.2□□□□□ -0.62
PRPF39-202ENST00000424478 IGHV2-70P01814 119 aa11.2□□□□□ -0.62
PRPF39-202ENST00000424478 HIST1H1DP16402 221 aaKnown RBP11.2□□□□□ -0.62
PRPF39-202ENST00000424478 GPR6P46095 362 aaPredicted RBP11.2□□□□□ -0.62
PRPF39-202ENST00000424478 ZNF260Q3ZCT1 412 aa11.2□□□□□ -0.62
PRPF39-202ENST00000424478 SETD6Q8TBK2 473 aa11.2□□□□□ -0.62
PRPF39-202ENST00000424478 WDFY2Q96P53 400 aa11.2□□□□□ -0.62
PRPF39-202ENST00000424478 SHARPINQ9H0F6 387 aa11.2□□□□□ -0.62
PRPF39-202ENST00000424478 LPAR2Q9HBW0 351 aa11.2□□□□□ -0.62
PRPF39-202ENST00000424478 DLL4Q9NR61 685 aa11.2□□□□□ -0.62
PRPF39-202ENST00000424478 ZNF701Q9NV72 531 aaPredicted RBP11.2□□□□□ -0.62
PRPF39-202ENST00000424478 A3GALT2U3KPV4 340 aa11.2□□□□□ -0.62
PRPF39-202ENST00000424478 PDCD6O75340 191 aa11.19□□□□□ -0.62
PRPF39-202ENST00000424478 KNG1P01042 644 aa11.19□□□□□ -0.62
PRPF39-202ENST00000424478 EDDM3BP56851 147 aa11.19□□□□□ -0.62
PRPF39-202ENST00000424478 ARFRP1Q13795 201 aa11.19□□□□□ -0.62
PRPF39-202ENST00000424478 BAK1Q16611 211 aa11.19□□□□□ -0.62
PRPF39-202ENST00000424478 FAM53AQ6NSI3 398 aaPredicted RBP11.19□□□□□ -0.62
PRPF39-202ENST00000424478 CDH24Q86UP0 819 aa11.19□□□□□ -0.62
PRPF39-202ENST00000424478 OR52I2Q8NH67 350 aa11.19□□□□□ -0.62
PRPF39-202ENST00000424478 RAB40AQ8WXH6 277 aa11.19□□□□□ -0.62
PRPF39-202ENST00000424478 SSX5O60225 188 aa11.19□□□□□ -0.62
PRPF39-202ENST00000424478 INHBBP09529 407 aa11.19□□□□□ -0.62
PRPF39-202ENST00000424478 FUT3P21217 361 aa11.19□□□□□ -0.62
PRPF39-202ENST00000424478 OR3A1P47881 315 aa11.19□□□□□ -0.62
PRPF39-202ENST00000424478 GLIPR1P48060 266 aa11.19□□□□□ -0.62
PRPF39-202ENST00000424478 DLX1P56177 255 aa11.19□□□□□ -0.62
PRPF39-202ENST00000424478 GRK1Q15835 563 aa11.19□□□□□ -0.62
PRPF39-202ENST00000424478 DEFB113Q30KQ7 82 aa11.19□□□□□ -0.62
PRPF39-202ENST00000424478 PRR18Q8N4B5 295 aa11.19□□□□□ -0.62
PRPF39-202ENST00000424478 ITGB1BP2Q9UKP3 347 aa11.19□□□□□ -0.62
PRPF39-202ENST00000424478 TRAV38-1A0A0B4J264 116 aa11.18□□□□□ -0.62
PRPF39-202ENST00000424478 MFNGO00587 321 aa11.18□□□□□ -0.62
PRPF39-202ENST00000424478 NDUFB7P17568 137 aa11.18□□□□□ -0.62
PRPF39-202ENST00000424478 MNDAP41218 407 aa11.18□□□□□ -0.62
PRPF39-202ENST00000424478 TEX36Q5VZQ5 186 aa11.18□□□□□ -0.62
PRPF39-202ENST00000424478 OR52W1Q6IF63 320 aa11.18□□□□□ -0.62
PRPF39-202ENST00000424478 ST8SIA4Q92187 359 aa11.18□□□□□ -0.62
PRPF39-202ENST00000424478 FAM168AQ92567 244 aa11.18□□□□□ -0.62
PRPF39-202ENST00000424478 PTX4Q96A99 478 aa11.18□□□□□ -0.62
PRPF39-202ENST00000424478 MRPS24Q96EL2 167 aaKnown RBP11.18□□□□□ -0.62
PRPF39-202ENST00000424478 MRI1Q9BV20 369 aa11.18□□□□□ -0.62
PRPF39-202ENST00000424478 IGKV1D-8A0A087WSZ0 117 aa11.18□□□□□ -0.62
PRPF39-202ENST00000424478 ZNF737O75373 536 aa11.18□□□□□ -0.62
PRPF39-202ENST00000424478 RCC1P18754 421 aaPredicted RBP11.18□□□□□ -0.62
PRPF39-202ENST00000424478 DNASE1P24855 282 aa11.18□□□□□ -0.62
PRPF39-202ENST00000424478 ZNF181Q2M3W8 571 aa11.18□□□□□ -0.62
PRPF39-202ENST00000424478 FAAP20Q6NZ36 180 aa11.18□□□□□ -0.62
PRPF39-202ENST00000424478 PEG10Q86TG7 708 aaKnown RBP11.18□□□□□ -0.62
PRPF39-202ENST00000424478 ADAM30Q9UKF2 790 aa11.18□□□□□ -0.62
PRPF39-202ENST00000424478 ACAA1P09110 424 aaPredicted RBP11.18□□□□□ -0.62
PRPF39-202ENST00000424478 SPIN3Q5JUX0 258 aa11.18□□□□□ -0.62
PRPF39-202ENST00000424478 FIP1L1Q6UN15 594 aaKnown RBP11.18□□□□□ -0.62
PRPF39-202ENST00000424478 H1FXQ92522 213 aaKnown RBP11.18□□□□□ -0.62
PRPF39-202ENST00000424478 COQ2Q96H96 371 aa11.18□□□□□ -0.62
PRPF39-202ENST00000424478 ST6GALNAC5Q9BVH7 336 aa11.18□□□□□ -0.62
PRPF39-202ENST00000424478 PCDHB16Q9NRJ7 776 aa11.18□□□□□ -0.62
PRPF39-202ENST00000424478 ETAA1Q9NY74 926 aa11.18□□□□□ -0.62
PRPF39-202ENST00000424478 IGHV4-61A0A0C4DH41 118 aa11.17□□□□□ -0.62
PRPF39-202ENST00000424478 DVL1O14640 695 aa11.17□□□□□ -0.62
PRPF39-202ENST00000424478 RPS2P15880 293 aaKnown RBP11.17□□□□□ -0.62
PRPF39-202ENST00000424478 SCAND1P57086 179 aa11.17□□□□□ -0.62
PRPF39-202ENST00000424478 ZNF788Q6ZQV5 615 aa11.17□□□□□ -0.62
PRPF39-202ENST00000424478 TRAPPC6BQ86SZ2 158 aa11.17□□□□□ -0.62
PRPF39-202ENST00000424478 OR8H2Q8N162 312 aa11.17□□□□□ -0.62
PRPF39-202ENST00000424478 SOSTQ9BQB4 213 aa11.17□□□□□ -0.62
PRPF39-202ENST00000424478 SRRQ9GZT4 340 aa11.17□□□□□ -0.62
PRPF39-202ENST00000424478 KIF25Q9UIL4 384 aa11.17□□□□□ -0.62
PRPF39-202ENST00000424478 MCRIP1C9JLW8 97 aa11.17□□□□□ -0.62
PRPF39-202ENST00000424478 MUC1P15941 1255 aaPredicted RBP11.17□□□□□ -0.62
PRPF39-202ENST00000424478 MDH2P40926 338 aaKnown RBP11.17□□□□□ -0.62
PRPF39-202ENST00000424478 IL13RA2Q14627 380 aa11.17□□□□□ -0.62
PRPF39-202ENST00000424478 CLEC12BQ2HXU8 276 aa11.17□□□□□ -0.62
PRPF39-202ENST00000424478 NHLRC3Q5JS37 347 aa11.17□□□□□ -0.62
PRPF39-202ENST00000424478 Q8N402 240 aa11.17□□□□□ -0.62
PRPF39-202ENST00000424478 RAB1CQ92928 201 aa11.17□□□□□ -0.62
PRPF39-202ENST00000424478 CHMP1AQ9HD42 196 aaPredicted RBP11.17□□□□□ -0.62
PRPF39-202ENST00000424478 ABCB10Q9NRK6 738 aa11.17□□□□□ -0.62
PRPF39-202ENST00000424478 RASL12Q9NYN1 266 aa11.17□□□□□ -0.62
PRPF39-202ENST00000424478 RCC2Q9P258 522 aaKnown RBP11.17□□□□□ -0.62
PRPF39-202ENST00000424478 PCDHB10Q9UN67 800 aa11.17□□□□□ -0.62
PRPF39-202ENST00000424478 DSCAML1Q8TD84 2053 aa11.17□□□□□ -0.62
PRPF39-202ENST00000424478 TK1P04183 234 aa11.16□□□□□ -0.62
PRPF39-202ENST00000424478 CHRM2P08172 466 aa11.16□□□□□ -0.62
PRPF39-202ENST00000424478 IFITM3Q01628 133 aa11.16□□□□□ -0.62
PRPF39-202ENST00000424478 LTC4SQ16873 150 aa11.16□□□□□ -0.62
PRPF39-202ENST00000424478 MPV17LQ2QL34 196 aa11.16□□□□□ -0.62
PRPF39-202ENST00000424478 Q5PR19 223 aa11.16□□□□□ -0.62
PRPF39-202ENST00000424478 CLEC2AQ6UVW9 174 aa11.16□□□□□ -0.62
PRPF39-202ENST00000424478 TIMD4Q96H15 378 aa11.16□□□□□ -0.62
PRPF39-202ENST00000424478 CMSS1Q9BQ75 279 aaKnown RBP11.16□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms