RNA–Protein interactions for RNA: ENST00000423442.6

LINC00458-201, long intergenic non-protein coding RNA 458, humanhuman

TSL 1 (best) BASIC

Gene LINC00458, Length 1,060 nt, Biotype lincRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00458-201ENST00000423442 MAGEB3O15480 346 aa4.62□□□□□ -1.67
LINC00458-201ENST00000423442 MAGEB4O15481 346 aaPredicted RBP4.62□□□□□ -1.67
LINC00458-201ENST00000423442 ENTPD6O75354 484 aa4.62□□□□□ -1.67
LINC00458-201ENST00000423442 GATBO75879 557 aaKnown RBP4.62□□□□□ -1.67
LINC00458-201ENST00000423442 NXPH2O95156 264 aa4.62□□□□□ -1.67
LINC00458-201ENST00000423442 NDUFB8O95169 186 aa4.62□□□□□ -1.67
LINC00458-201ENST00000423442 PAHP00439 452 aa4.62□□□□□ -1.67
LINC00458-201ENST00000423442 TTRP02766 147 aa4.62□□□□□ -1.67
LINC00458-201ENST00000423442 HTR1AP08908 422 aa4.62□□□□□ -1.67
LINC00458-201ENST00000423442 FAM90A15PP0C7V4 464 aa4.62□□□□□ -1.67
LINC00458-201ENST00000423442 FAM90A14PP0C7W9 464 aa4.62□□□□□ -1.67
LINC00458-201ENST00000423442 UBCP0CG48 685 aaKnown RBP4.62□□□□□ -1.67
LINC00458-201ENST00000423442 ZNF19P17023 458 aa4.62□□□□□ -1.67
LINC00458-201ENST00000423442 PRTN3P24158 256 aa4.62□□□□□ -1.67
LINC00458-201ENST00000423442 ACKR3P25106 362 aa4.62□□□□□ -1.67
LINC00458-201ENST00000423442 TGM4P49221 684 aa4.62□□□□□ -1.67
LINC00458-201ENST00000423442 FUT6P51993 359 aa4.62□□□□□ -1.67
LINC00458-201ENST00000423442 GBX2P52951 348 aaPredicted RBP4.62□□□□□ -1.67
LINC00458-201ENST00000423442 ATP1B3P54709 279 aa4.62□□□□□ -1.67
LINC00458-201ENST00000423442 MTCP1P56278 107 aa4.62□□□□□ -1.67
LINC00458-201ENST00000423442 ACTA2P62736 377 aa4.62□□□□□ -1.67
LINC00458-201ENST00000423442 ACTG2P63267 376 aa4.62□□□□□ -1.67
LINC00458-201ENST00000423442 CSNK2BP67870 215 aa4.62□□□□□ -1.67
LINC00458-201ENST00000423442 CDONQ4KMG0 1287 aa4.62□□□□□ -1.67
LINC00458-201ENST00000423442 TMEM244Q5VVB8 128 aa4.62□□□□□ -1.67
LINC00458-201ENST00000423442 HAGHLQ6PII5 290 aaPredicted RBP4.62□□□□□ -1.67
LINC00458-201ENST00000423442 TMPRSS11AQ6ZMR5 421 aa4.62□□□□□ -1.67
LINC00458-201ENST00000423442 ZNF841Q6ZN19 808 aa4.62□□□□□ -1.67
LINC00458-201ENST00000423442 C11orf53Q8IXP5 236 aa4.62□□□□□ -1.67
LINC00458-201ENST00000423442 MKXQ8IYA7 352 aa4.62□□□□□ -1.67
LINC00458-201ENST00000423442 ZNF561Q8N587 486 aa4.62□□□□□ -1.67
LINC00458-201ENST00000423442 ZNF676Q8N7Q3 588 aa4.62□□□□□ -1.67
LINC00458-201ENST00000423442 SIGLECL1Q8N7X8 197 aa4.62□□□□□ -1.67
LINC00458-201ENST00000423442 ZSCAN4Q8NAM6 433 aaPredicted RBP4.62□□□□□ -1.67
LINC00458-201ENST00000423442 OR5D14Q8NGL3 314 aa4.62□□□□□ -1.67
LINC00458-201ENST00000423442 OR5D13Q8NGL4 314 aa4.62□□□□□ -1.67
LINC00458-201ENST00000423442 HAVCR2Q8TDQ0 301 aa4.62□□□□□ -1.67
LINC00458-201ENST00000423442 NPRL2Q8WTW4 380 aa4.62□□□□□ -1.67
LINC00458-201ENST00000423442 PP6455Q8WZ26 134 aa4.62□□□□□ -1.67
LINC00458-201ENST00000423442 UPRTQ96BW1 309 aa4.62□□□□□ -1.67
LINC00458-201ENST00000423442 C10orf35Q96D05 121 aa4.62□□□□□ -1.67
LINC00458-201ENST00000423442 RNFT2Q96EX2 444 aa4.62□□□□□ -1.67
LINC00458-201ENST00000423442 BORCS8Q96FH0 119 aa4.62□□□□□ -1.67
LINC00458-201ENST00000423442 COMMD4Q9H0A8 199 aa4.62□□□□□ -1.67
LINC00458-201ENST00000423442 TLNRD1Q9H1K6 362 aa4.62□□□□□ -1.67
LINC00458-201ENST00000423442 SLC25A32Q9H2D1 315 aa4.62□□□□□ -1.67
LINC00458-201ENST00000423442 VCXQ9H320 206 aa4.62□□□□□ -1.67
LINC00458-201ENST00000423442 DPAGT1Q9H3H5 408 aa4.62□□□□□ -1.67
LINC00458-201ENST00000423442 NOX4Q9NPH5 578 aa4.62□□□□□ -1.67
LINC00458-201ENST00000423442 USE1Q9NZ43 259 aa4.62□□□□□ -1.67
LINC00458-201ENST00000423442 SLC25A10Q9UBX3 287 aaPredicted RBP4.62□□□□□ -1.67
LINC00458-201ENST00000423442 RPUSD1Q9UJJ7 312 aaKnown RBP4.62□□□□□ -1.67
LINC00458-201ENST00000423442 COPS3Q9UNS2 423 aa4.62□□□□□ -1.67
LINC00458-201ENST00000423442 SLC22A13Q9Y226 551 aa4.62□□□□□ -1.67
LINC00458-201ENST00000423442 PCDHGB5Q9Y5G0 923 aa4.62□□□□□ -1.67
LINC00458-201ENST00000423442 TRAV40A0A0B4J280 105 aa4.61□□□□□ -1.67
LINC00458-201ENST00000423442 IGHV1-69DA0A0B4J2H0 117 aa4.61□□□□□ -1.67
LINC00458-201ENST00000423442 TMEM272A0A1B0GTI8 110 aa4.61□□□□□ -1.67
LINC00458-201ENST00000423442 IRGMA1A4Y4 181 aa4.61□□□□□ -1.67
LINC00458-201ENST00000423442 A6NIN4 97 aa4.61□□□□□ -1.67
LINC00458-201ENST00000423442 SRRM5B3KS81 715 aa4.61□□□□□ -1.67
LINC00458-201ENST00000423442 TNFRSF13BO14836 293 aaPredicted RBP4.61□□□□□ -1.67
LINC00458-201ENST00000423442 RHBDL1O75783 438 aa4.61□□□□□ -1.67
LINC00458-201ENST00000423442 IGHV1-69P01742 117 aa4.61□□□□□ -1.67
LINC00458-201ENST00000423442 CSF1P09603 554 aa4.61□□□□□ -1.67
LINC00458-201ENST00000423442 PRKACBP22694 351 aa4.61□□□□□ -1.67
LINC00458-201ENST00000423442 PRDX2P32119 198 aa4.61□□□□□ -1.67
LINC00458-201ENST00000423442 RBP2P50120 134 aa4.61□□□□□ -1.67
LINC00458-201ENST00000423442 CAV3P56539 151 aa4.61□□□□□ -1.67
LINC00458-201ENST00000423442 MFGE8Q08431 387 aaPredicted RBP4.61□□□□□ -1.67
LINC00458-201ENST00000423442 RAB40BQ12829 278 aa4.61□□□□□ -1.67
LINC00458-201ENST00000423442 MRPL28Q13084 256 aaKnown RBP4.61□□□□□ -1.67
LINC00458-201ENST00000423442 ODF3L2Q3SX64 289 aa4.61□□□□□ -1.67
LINC00458-201ENST00000423442 TP53I3Q53FA7 332 aa4.61□□□□□ -1.67
LINC00458-201ENST00000423442 DMRTC1Q5HYR2 192 aa4.61□□□□□ -1.67
LINC00458-201ENST00000423442 WDR38Q5JTN6 314 aa4.61□□□□□ -1.67
LINC00458-201ENST00000423442 TTC23Q5W5X9 447 aa4.61□□□□□ -1.67
LINC00458-201ENST00000423442 C16orf87Q6PH81 154 aa4.61□□□□□ -1.67
LINC00458-201ENST00000423442 BRD3OSQ6XYD6 125 aa4.61□□□□□ -1.67
LINC00458-201ENST00000423442 GDPD3Q7L5L3 318 aa4.61□□□□□ -1.67
LINC00458-201ENST00000423442 LHFPL3Q86UP9 236 aa4.61□□□□□ -1.67
LINC00458-201ENST00000423442 CATSPERDQ86XM0 798 aa4.61□□□□□ -1.67
LINC00458-201ENST00000423442 Q8IYB0 196 aa4.61□□□□□ -1.67
LINC00458-201ENST00000423442 ENTHD1Q8IYW4 607 aa4.61□□□□□ -1.67
LINC00458-201ENST00000423442 FAM216BQ8N7L0 139 aa4.61□□□□□ -1.67
LINC00458-201ENST00000423442 C11orf44Q8N8P7 122 aa4.61□□□□□ -1.67
LINC00458-201ENST00000423442 SETD9Q8NE22 299 aa4.61□□□□□ -1.67
LINC00458-201ENST00000423442 TMEM185AQ8NFB2 350 aa4.61□□□□□ -1.67
LINC00458-201ENST00000423442 OR13C3Q8NGS6 347 aa4.61□□□□□ -1.67
LINC00458-201ENST00000423442 RHOXF1Q8NHV9 184 aa4.61□□□□□ -1.67
LINC00458-201ENST00000423442 TRMT10AQ8TBZ6 339 aaKnown RBP4.61□□□□□ -1.67
LINC00458-201ENST00000423442 AQP3Q92482 292 aa4.61□□□□□ -1.67
LINC00458-201ENST00000423442 RORBQ92753 470 aa4.61□□□□□ -1.67
LINC00458-201ENST00000423442 LHX4Q969G2 390 aa4.61□□□□□ -1.67
LINC00458-201ENST00000423442 FGGYQ96C11 551 aa4.61□□□□□ -1.67
LINC00458-201ENST00000423442 CPNE2Q96FN4 548 aaPredicted RBP4.61□□□□□ -1.67
LINC00458-201ENST00000423442 WDR13Q9H1Z4 485 aa4.61□□□□□ -1.67
LINC00458-201ENST00000423442 PPP1R3EQ9H7J1 279 aa4.61□□□□□ -1.67
LINC00458-201ENST00000423442 METTL8Q9H825 291 aaKnown RBP4.61□□□□□ -1.67
LINC00458-201ENST00000423442 HEXA-AS1Q9H8Q6 139 aa4.61□□□□□ -1.67
Retrieved 100 of 20,778 RNA–protein pairs in 42.1 ms