RNA–Protein interactions for RNA: ENST00000423327.2

SPC24-201, Transcript of SPC24, NDC80 kinetochore complex component, humanhuman

TSL 2

Gene SPC24, Length 840 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPC24-201ENST00000423327 TMEM80Q96HE8 168 aa12.5□□□□□ -0.41
SPC24-201ENST00000423327 RHOFQ9HBH0 211 aa12.5□□□□□ -0.41
SPC24-201ENST00000423327 BABAM2Q9NXR7 383 aa12.5□□□□□ -0.41
SPC24-201ENST00000423327 NKX1-2Q9UD57 310 aaPredicted RBP12.5□□□□□ -0.41
SPC24-201ENST00000423327 SIGLEC9Q9Y336 463 aa12.5□□□□□ -0.41
SPC24-201ENST00000423327 TBL2Q9Y4P3 447 aaKnown RBP12.5□□□□□ -0.41
SPC24-201ENST00000423327 SESN1Q9Y6P5 492 aa12.5□□□□□ -0.41
SPC24-201ENST00000423327 IRGMA1A4Y4 181 aa12.49□□□□□ -0.41
SPC24-201ENST00000423327 CSN2P05814 226 aa12.49□□□□□ -0.41
SPC24-201ENST00000423327 RPSAP08865 295 aaKnown RBP12.49□□□□□ -0.41
SPC24-201ENST00000423327 IGFBP3P17936 291 aaPredicted RBP12.49□□□□□ -0.41
SPC24-201ENST00000423327 OR3A4PP47883 348 aa12.49□□□□□ -0.41
SPC24-201ENST00000423327 RAB13P51153 203 aa12.49□□□□□ -0.41
SPC24-201ENST00000423327 LGALS4P56470 323 aa12.49□□□□□ -0.41
SPC24-201ENST00000423327 ST3GAL4Q11206 333 aa12.49□□□□□ -0.41
SPC24-201ENST00000423327 ATXN7L3Q14CW9 347 aaPredicted RBP12.49□□□□□ -0.41
SPC24-201ENST00000423327 ELP2Q6IA86 826 aa12.49□□□□□ -0.41
SPC24-201ENST00000423327 TREML4Q6UXN2 200 aa12.49□□□□□ -0.41
SPC24-201ENST00000423327 ASCL4Q6XD76 172 aa12.49□□□□□ -0.41
SPC24-201ENST00000423327 Q8NFD4 153 aa12.49□□□□□ -0.41
SPC24-201ENST00000423327 OR4P4Q8NGL7 312 aa12.49□□□□□ -0.41
SPC24-201ENST00000423327 TNFAIP8L1Q8WVP5 186 aa12.49□□□□□ -0.41
SPC24-201ENST00000423327 PPIL3Q9H2H8 161 aaKnown RBP12.49□□□□□ -0.41
SPC24-201ENST00000423327 TMEM133Q9H2Q1 129 aa12.49□□□□□ -0.41
SPC24-201ENST00000423327 ZNF281Q9Y2X9 895 aa12.49□□□□□ -0.41
SPC24-201ENST00000423327 UBE2J1Q9Y385 318 aaPredicted RBP12.49□□□□□ -0.41
SPC24-201ENST00000423327 HSPE1-MOB4S4R3N1 261 aa12.49□□□□□ -0.41
SPC24-201ENST00000423327 TRAV24A0A0B4J272 114 aa12.48□□□□□ -0.41
SPC24-201ENST00000423327 MYL12AP19105 171 aa12.48□□□□□ -0.41
SPC24-201ENST00000423327 C21orf33P30042 268 aaPredicted RBP12.48□□□□□ -0.41
SPC24-201ENST00000423327 MTNR1BP49286 362 aa12.48□□□□□ -0.41
SPC24-201ENST00000423327 SCN1BQ07699 218 aa12.48□□□□□ -0.41
SPC24-201ENST00000423327 SSX2Q16385 188 aa12.48□□□□□ -0.41
SPC24-201ENST00000423327 PIGYQ3MUY2 71 aa12.48□□□□□ -0.41
SPC24-201ENST00000423327 HIST2H2BDQ6DRA6 164 aa12.48□□□□□ -0.41
SPC24-201ENST00000423327 C8orf59Q8N0T1 100 aaPredicted RBP12.48□□□□□ -0.41
SPC24-201ENST00000423327 OR51T1Q8NGJ9 327 aa12.48□□□□□ -0.41
SPC24-201ENST00000423327 CORO2AQ92828 525 aa12.48□□□□□ -0.41
SPC24-201ENST00000423327 GHSRQ92847 366 aa12.48□□□□□ -0.41
SPC24-201ENST00000423327 FKBP14Q9NWM8 211 aa12.48□□□□□ -0.41
SPC24-201ENST00000423327 ING3Q9NXR8 418 aa12.48□□□□□ -0.41
SPC24-201ENST00000423327 GLS2Q9UI32 602 aa12.48□□□□□ -0.41
SPC24-201ENST00000423327 PSORS1C1Q9UIG5 152 aa12.48□□□□□ -0.41
SPC24-201ENST00000423327 TCF19Q9Y242 345 aa12.48□□□□□ -0.41
SPC24-201ENST00000423327 TRAV8-7A0A075B6U6 113 aa12.47□□□□□ -0.41
SPC24-201ENST00000423327 ODAMA1E959 279 aa12.47□□□□□ -0.41
SPC24-201ENST00000423327 FAM172BPA6NC97 362 aa12.47□□□□□ -0.41
SPC24-201ENST00000423327 H0YJX3 145 aa12.47□□□□□ -0.41
SPC24-201ENST00000423327 HSPB6O14558 160 aa12.47□□□□□ -0.41
SPC24-201ENST00000423327 CDRT1O95170 752 aa12.47□□□□□ -0.41
SPC24-201ENST00000423327 ALDOBP05062 364 aa12.47□□□□□ -0.41
SPC24-201ENST00000423327 CDK2P24941 298 aa12.47□□□□□ -0.41
SPC24-201ENST00000423327 EFNB2P52799 333 aa12.47□□□□□ -0.41
SPC24-201ENST00000423327 DYNC1I2Q13409 638 aaKnown RBP12.47□□□□□ -0.41
SPC24-201ENST00000423327 FAM189A2Q15884 450 aa12.47□□□□□ -0.41
SPC24-201ENST00000423327 C17orf58Q2M2W7 97 aa12.47□□□□□ -0.41
SPC24-201ENST00000423327 FBLN7Q53RD9 439 aa12.47□□□□□ -0.41
SPC24-201ENST00000423327 AHSA2Q719I0 299 aa12.47□□□□□ -0.41
SPC24-201ENST00000423327 TRAPPC6BQ86SZ2 158 aa12.47□□□□□ -0.41
SPC24-201ENST00000423327 SATL1Q86VE3 508 aa12.47□□□□□ -0.41
SPC24-201ENST00000423327 CHST4Q8NCG5 386 aa12.47□□□□□ -0.41
SPC24-201ENST00000423327 PLPPR1Q8TBJ4 325 aa12.47□□□□□ -0.41
SPC24-201ENST00000423327 TFAP2CQ92754 450 aa12.47□□□□□ -0.41
SPC24-201ENST00000423327 FOXRED1Q96CU9 486 aaPredicted RBP12.47□□□□□ -0.41
SPC24-201ENST00000423327 MALSU1Q96EH3 234 aa12.47□□□□□ -0.41
SPC24-201ENST00000423327 NR1H4Q96RI1 486 aaPredicted RBP12.47□□□□□ -0.41
SPC24-201ENST00000423327 CLEC7AQ9BXN2 247 aa12.47□□□□□ -0.41
SPC24-201ENST00000423327 PLCXD1Q9NUJ7 323 aa12.47□□□□□ -0.41
SPC24-201ENST00000423327 CNOT2Q9NZN8 540 aaKnown RBP12.47□□□□□ -0.41
SPC24-201ENST00000423327 FBLN5Q9UBX5 448 aa12.47□□□□□ -0.41
SPC24-201ENST00000423327 TRGV10A0A0A0MS01 117 aa12.46□□□□□ -0.41
SPC24-201ENST00000423327 TRBV5-7A0A0A0MS05 114 aa12.46□□□□□ -0.41
SPC24-201ENST00000423327 A6NDX4 124 aa12.46□□□□□ -0.41
SPC24-201ENST00000423327 DEGS1O15121 323 aa12.46□□□□□ -0.41
SPC24-201ENST00000423327 CD2P06729 351 aa12.46□□□□□ -0.41
SPC24-201ENST00000423327 CGB3P0DN86 165 aa12.46□□□□□ -0.41
SPC24-201ENST00000423327 CGB7P0DN87 165 aa12.46□□□□□ -0.41
SPC24-201ENST00000423327 GABRA5P31644 462 aa12.46□□□□□ -0.41
SPC24-201ENST00000423327 IL13RA2Q14627 380 aa12.46□□□□□ -0.41
SPC24-201ENST00000423327 KRBOX4Q5JUW0 171 aa12.46□□□□□ -0.41
SPC24-201ENST00000423327 DDI2Q5TDH0 399 aa12.46□□□□□ -0.41
SPC24-201ENST00000423327 HEPN1Q6WQI6 88 aa12.46□□□□□ -0.41
SPC24-201ENST00000423327 TMEM219Q86XT9 240 aa12.46□□□□□ -0.41
SPC24-201ENST00000423327 NRG4Q8WWG1 115 aa12.46□□□□□ -0.41
SPC24-201ENST00000423327 GPER1Q99527 375 aa12.46□□□□□ -0.41
SPC24-201ENST00000423327 FAM192AQ9GZU8 254 aa12.46□□□□□ -0.41
SPC24-201ENST00000423327 ZNF702PQ9H963 129 aa12.46□□□□□ -0.41
SPC24-201ENST00000423327 ZNF286AQ9HBT8 521 aa12.46□□□□□ -0.41
SPC24-201ENST00000423327 TMEM138Q9NPI0 162 aa12.46□□□□□ -0.41
SPC24-201ENST00000423327 TAS2R3Q9NYW6 316 aa12.46□□□□□ -0.41
SPC24-201ENST00000423327 PCDHGB5Q9Y5G0 923 aa12.46□□□□□ -0.41
SPC24-201ENST00000423327 HILPDAQ9Y5L2 63 aa12.46□□□□□ -0.41
SPC24-201ENST00000423327 PNMA8CA0A1B0GUJ8 204 aa12.45□□□□□ -0.42
SPC24-201ENST00000423327 A0A1W2PP11 408 aa12.45□□□□□ -0.42
SPC24-201ENST00000423327 EFCAB10A6NFE3 127 aa12.45□□□□□ -0.42
SPC24-201ENST00000423327 IGLV1-47P01700 117 aa12.45□□□□□ -0.42
SPC24-201ENST00000423327 FSTP19883 344 aa12.45□□□□□ -0.42
SPC24-201ENST00000423327 CD34P28906 385 aa12.45□□□□□ -0.42
SPC24-201ENST00000423327 BDKRB2P30411 391 aa12.45□□□□□ -0.42
SPC24-201ENST00000423327 PTGFRP43088 359 aa12.45□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 49.1 ms