RNA–Protein interactions for RNA: ENST00000421670.3

DDX55-203, Transcript of DEAD-box helicase 55, humanhuman

TSL 1 (best) BASIC

Gene DDX55, Length 1,574 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX55-203ENST00000421670 FAM90A7PA6NKC0 464 aa13.05□□□□□ -0.32
DDX55-203ENST00000421670 FAM90A22PA8MWA6 464 aa13.05□□□□□ -0.32
DDX55-203ENST00000421670 FAM90A12PA8MX19 464 aa13.05□□□□□ -0.32
DDX55-203ENST00000421670 FAM90A5PA8MXJ8 464 aa13.05□□□□□ -0.32
DDX55-203ENST00000421670 FAM90A23PA8MXZ1 464 aa13.05□□□□□ -0.32
DDX55-203ENST00000421670 RGS5O15539 181 aa13.05□□□□□ -0.32
DDX55-203ENST00000421670 PHF1O43189 567 aaPredicted RBP13.05□□□□□ -0.32
DDX55-203ENST00000421670 NDUFB3O43676 98 aa13.05□□□□□ -0.32
DDX55-203ENST00000421670 TK1P04183 234 aa13.05□□□□□ -0.32
DDX55-203ENST00000421670 FAM90A15PP0C7V4 464 aa13.05□□□□□ -0.32
DDX55-203ENST00000421670 FAM90A13PP0C7W8 464 aa13.05□□□□□ -0.32
DDX55-203ENST00000421670 FAM90A14PP0C7W9 464 aa13.05□□□□□ -0.32
DDX55-203ENST00000421670 FAM90A24PP0C7X0 464 aa13.05□□□□□ -0.32
DDX55-203ENST00000421670 LMO1P25800 156 aa13.05□□□□□ -0.32
DDX55-203ENST00000421670 BLVRBP30043 206 aaPredicted RBP13.05□□□□□ -0.32
DDX55-203ENST00000421670 OR3A1P47881 315 aa13.05□□□□□ -0.32
DDX55-203ENST00000421670 ATXN7L3Q14CW9 347 aaPredicted RBP13.05□□□□□ -0.32
DDX55-203ENST00000421670 CNPY1Q3B7I2 92 aa13.05□□□□□ -0.32
DDX55-203ENST00000421670 RAB12Q6IQ22 244 aa13.05□□□□□ -0.32
DDX55-203ENST00000421670 MZT2AQ6P582 158 aa13.05□□□□□ -0.32
DDX55-203ENST00000421670 C6orf201Q7Z4U5 140 aa13.05□□□□□ -0.32
DDX55-203ENST00000421670 LAX1Q8IWV1 398 aa13.05□□□□□ -0.32
DDX55-203ENST00000421670 CMTM4Q8IZR5 234 aa13.05□□□□□ -0.32
DDX55-203ENST00000421670 CHST4Q8NCG5 386 aa13.05□□□□□ -0.32
DDX55-203ENST00000421670 OR4S1Q8NGB4 309 aa13.05□□□□□ -0.32
DDX55-203ENST00000421670 OR56B1Q8NGI3 324 aa13.05□□□□□ -0.32
DDX55-203ENST00000421670 RAB39BQ96DA2 213 aa13.05□□□□□ -0.32
DDX55-203ENST00000421670 SHARPINQ9H0F6 387 aa13.05□□□□□ -0.32
DDX55-203ENST00000421670 IFT22Q9H7X7 185 aa13.05□□□□□ -0.32
DDX55-203ENST00000421670 SLC25A10Q9UBX3 287 aaPredicted RBP13.05□□□□□ -0.32
DDX55-203ENST00000421670 CLN8Q9UBY8 286 aa13.05□□□□□ -0.32
DDX55-203ENST00000421670 PEX16Q9Y5Y5 336 aa13.05□□□□□ -0.32
DDX55-203ENST00000421670 METTL21EPA6NDL7 271 aa13.04□□□□□ -0.32
DDX55-203ENST00000421670 FOXI3A8MTJ6 420 aaPredicted RBP13.04□□□□□ -0.32
DDX55-203ENST00000421670 FAM157AC9JC47 383 aa13.04□□□□□ -0.32
DDX55-203ENST00000421670 H7C1Q1 480 aa13.04□□□□□ -0.32
DDX55-203ENST00000421670 K7N7A8 449 aa13.04□□□□□ -0.32
DDX55-203ENST00000421670 RAB27BO00194 218 aa13.04□□□□□ -0.32
DDX55-203ENST00000421670 CTDSP2O14595 271 aa13.04□□□□□ -0.32
DDX55-203ENST00000421670 PDCD6O75340 191 aa13.04□□□□□ -0.32
DDX55-203ENST00000421670 NDUFB7P17568 137 aa13.04□□□□□ -0.32
DDX55-203ENST00000421670 CHATP28329 748 aa13.04□□□□□ -0.32
DDX55-203ENST00000421670 LOXL1Q08397 574 aaPredicted RBP13.04□□□□□ -0.32
DDX55-203ENST00000421670 DYNC1I2Q13409 638 aaKnown RBP13.04□□□□□ -0.32
DDX55-203ENST00000421670 GRK1Q15835 563 aa13.04□□□□□ -0.32
DDX55-203ENST00000421670 LRRC10Q5BKY1 277 aa13.04□□□□□ -0.32
DDX55-203ENST00000421670 OR8H2Q8N162 312 aa13.04□□□□□ -0.32
DDX55-203ENST00000421670 DTX3Q8N9I9 347 aa13.04□□□□□ -0.32
DDX55-203ENST00000421670 DYRK2Q92630 601 aa13.04□□□□□ -0.32
DDX55-203ENST00000421670 ARHGAP5-AS1Q96IT6 56 aa13.04□□□□□ -0.32
DDX55-203ENST00000421670 DPCDQ9BVM2 203 aaPredicted RBP13.04□□□□□ -0.32
DDX55-203ENST00000421670 SSBP3Q9BWW4 388 aaPredicted RBP13.04□□□□□ -0.32
DDX55-203ENST00000421670 NXF2Q9GZY0 626 aaKnown RBP13.04□□□□□ -0.32
DDX55-203ENST00000421670 MIXL1Q9H2W2 232 aa13.04□□□□□ -0.32
DDX55-203ENST00000421670 SEBOXQ9HB31 216 aaPredicted RBP13.04□□□□□ -0.32
DDX55-203ENST00000421670 ING3Q9NXR8 418 aa13.04□□□□□ -0.32
DDX55-203ENST00000421670 WNK2Q9Y3S1 2297 aa13.04□□□□□ -0.32
DDX55-203ENST00000421670 HIVEP1P15822 2718 aa13.04□□□□□ -0.32
DDX55-203ENST00000421670 A0A075B6Q4 140 aa13.03□□□□□ -0.32
DDX55-203ENST00000421670 ELK1P19419 428 aa13.03□□□□□ -0.32
DDX55-203ENST00000421670 FUT3P21217 361 aa13.03□□□□□ -0.32
DDX55-203ENST00000421670 TMEM50BP56557 158 aa13.03□□□□□ -0.32
DDX55-203ENST00000421670 GNB2P62879 340 aa13.03□□□□□ -0.32
DDX55-203ENST00000421670 MADCAM1Q13477 382 aa13.03□□□□□ -0.32
DDX55-203ENST00000421670 EDDM3AQ14507 147 aa13.03□□□□□ -0.32
DDX55-203ENST00000421670 ESCO2Q56NI9 601 aa13.03□□□□□ -0.32
DDX55-203ENST00000421670 PLAC9Q5JTB6 97 aa13.03□□□□□ -0.32
DDX55-203ENST00000421670 WDR25Q64LD2 544 aaPredicted RBP13.03□□□□□ -0.32
DDX55-203ENST00000421670 OR10R2Q8NGX6 335 aa13.03□□□□□ -0.32
DDX55-203ENST00000421670 NEK7Q8TDX7 302 aa13.03□□□□□ -0.32
DDX55-203ENST00000421670 SNX22Q96L94 193 aa13.03□□□□□ -0.32
DDX55-203ENST00000421670 NEDD4LQ96PU5 975 aa13.03□□□□□ -0.32
DDX55-203ENST00000421670 ABCG5Q9H222 651 aa13.03□□□□□ -0.32
DDX55-203ENST00000421670 SPACA1Q9HBV2 294 aa13.03□□□□□ -0.32
DDX55-203ENST00000421670 LPAR2Q9HBW0 351 aa13.03□□□□□ -0.32
DDX55-203ENST00000421670 TLN2Q9Y4G6 2542 aa13.03□□□□□ -0.32
DDX55-203ENST00000421670 UBE2QL1A1L167 161 aa13.03□□□□□ -0.32
DDX55-203ENST00000421670 SMAD7O15105 426 aaKnown RBP13.03□□□□□ -0.32
DDX55-203ENST00000421670 HEXAP06865 529 aa13.03□□□□□ -0.32
DDX55-203ENST00000421670 CDK2P24941 298 aa13.03□□□□□ -0.32
DDX55-203ENST00000421670 ZFP36P26651 326 aaKnown RBP13.03□□□□□ -0.32
DDX55-203ENST00000421670 LCN2P80188 198 aa13.03□□□□□ -0.32
DDX55-203ENST00000421670 FAM189A2Q15884 450 aa13.03□□□□□ -0.32
DDX55-203ENST00000421670 OLFML2AQ68BL7 652 aa13.03□□□□□ -0.32
DDX55-203ENST00000421670 IZUMO1Q8IYV9 350 aa13.03□□□□□ -0.32
DDX55-203ENST00000421670 TPRX1Q8N7U7 411 aa13.03□□□□□ -0.32
DDX55-203ENST00000421670 PLPPR1Q8TBJ4 325 aa13.03□□□□□ -0.32
DDX55-203ENST00000421670 H1FXQ92522 213 aaKnown RBP13.03□□□□□ -0.32
DDX55-203ENST00000421670 RAB3CQ96E17 227 aa13.03□□□□□ -0.32
DDX55-203ENST00000421670 SULT4A1Q9BR01 284 aa13.03□□□□□ -0.32
DDX55-203ENST00000421670 FAM234AQ9H0X4 552 aa13.03□□□□□ -0.32
DDX55-203ENST00000421670 ZMAT3Q9HA38 289 aaKnown RBP13.03□□□□□ -0.32
DDX55-203ENST00000421670 MEX3AA1L020 520 aaKnown RBP13.02□□□□□ -0.33
DDX55-203ENST00000421670 KIAA1324LA8MWY0 1029 aaPredicted RBP13.02□□□□□ -0.33
DDX55-203ENST00000421670 FAM25AB3EWG3 89 aa13.02□□□□□ -0.33
DDX55-203ENST00000421670 FAM25CB3EWG5 89 aa13.02□□□□□ -0.33
DDX55-203ENST00000421670 FAM25GB3EWG6 89 aa13.02□□□□□ -0.33
DDX55-203ENST00000421670 MCRIP1C9JLW8 97 aa13.02□□□□□ -0.33
DDX55-203ENST00000421670 APOA1P02647 267 aa13.02□□□□□ -0.33
DDX55-203ENST00000421670 GNB3P16520 340 aa13.02□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 36.1 ms