RNA–Protein interactions for RNA: ENST00000421141.5

PTCH1-206, Transcript of patched 1, humanhuman

TSL 5 BASIC

Gene PTCH1, Length 7,659 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1-206ENST00000421141 ACSM6Q6P461 480 aa9.37□□□□□ -0.91
PTCH1-206ENST00000421141 LINC00299Q6ZSB3 139 aa9.37□□□□□ -0.91
PTCH1-206ENST00000421141 OIP5O43482 229 aa9.37□□□□□ -0.91
PTCH1-206ENST00000421141 FOXH1O75593 365 aa9.37□□□□□ -0.91
PTCH1-206ENST00000421141 TFAP2AP05549 437 aa9.37□□□□□ -0.91
PTCH1-206ENST00000421141 OR8D4Q8NGM9 314 aa9.37□□□□□ -0.91
PTCH1-206ENST00000421141 ORAI1Q96D31 301 aa9.37□□□□□ -0.91
PTCH1-206ENST00000421141 MAP6Q96JE9 813 aa9.37□□□□□ -0.91
PTCH1-206ENST00000421141 TMEM147Q9BVK8 224 aa9.37□□□□□ -0.91
PTCH1-206ENST00000421141 PURGQ9UJV8 347 aaKnown RBP9.37□□□□□ -0.91
PTCH1-206ENST00000421141 TTC28Q96AY4 2481 aa9.37□□□□□ -0.91
PTCH1-206ENST00000421141 SMAD7O15105 426 aaKnown RBP9.37□□□□□ -0.91
PTCH1-206ENST00000421141 JTBO76095 146 aa9.37□□□□□ -0.91
PTCH1-206ENST00000421141 ZFP62Q8NB50 900 aaPredicted RBP9.37□□□□□ -0.91
PTCH1-206ENST00000421141 APCDD1LQ8NCL9 501 aa9.37□□□□□ -0.91
PTCH1-206ENST00000421141 DYNLRB2Q8TF09 96 aa9.37□□□□□ -0.91
PTCH1-206ENST00000421141 CTNNBIP1Q9NSA3 81 aaPredicted RBP9.37□□□□□ -0.91
PTCH1-206ENST00000421141 CSAG2Q9Y5P2 127 aa9.37□□□□□ -0.91
PTCH1-206ENST00000421141 IGF2P01344 180 aa9.37□□□□□ -0.91
PTCH1-206ENST00000421141 IGHV3-13P01766 116 aa9.37□□□□□ -0.91
PTCH1-206ENST00000421141 IGHV3-7P01780 117 aa9.37□□□□□ -0.91
PTCH1-206ENST00000421141 RRASP10301 218 aa9.37□□□□□ -0.91
PTCH1-206ENST00000421141 TGM1P22735 817 aa9.37□□□□□ -0.91
PTCH1-206ENST00000421141 AARDQ4LEZ3 155 aa9.37□□□□□ -0.91
PTCH1-206ENST00000421141 MRPL14Q6P1L8 145 aaKnown RBP9.37□□□□□ -0.91
PTCH1-206ENST00000421141 TGIF2LYQ8IUE0 185 aa9.37□□□□□ -0.91
PTCH1-206ENST00000421141 TGIF2LXQ8IUE1 241 aa9.37□□□□□ -0.91
PTCH1-206ENST00000421141 SKA3Q8IX90 412 aa9.37□□□□□ -0.91
PTCH1-206ENST00000421141 C1orf162Q8NEQ5 155 aaPredicted RBP9.37□□□□□ -0.91
PTCH1-206ENST00000421141 PRDX2P32119 198 aa9.37□□□□□ -0.91
PTCH1-206ENST00000421141 CD80P33681 288 aa9.37□□□□□ -0.91
PTCH1-206ENST00000421141 TMEM128Q5BJH2 165 aa9.37□□□□□ -0.91
PTCH1-206ENST00000421141 C17orf50Q8WW18 174 aa9.37□□□□□ -0.91
PTCH1-206ENST00000421141 SSX3Q99909 188 aa9.37□□□□□ -0.91
PTCH1-206ENST00000421141 PCDH15Q96QU1 1955 aa9.37□□□□□ -0.91
PTCH1-206ENST00000421141 IGLV3-12A0A075B6K2 115 aa9.36□□□□□ -0.91
PTCH1-206ENST00000421141 C4orf51C9J302 202 aa9.36□□□□□ -0.91
PTCH1-206ENST00000421141 NHLH1Q02575 133 aa9.36□□□□□ -0.91
PTCH1-206ENST00000421141 CEBPEQ15744 281 aa9.36□□□□□ -0.91
PTCH1-206ENST00000421141 OR2G3Q8NGZ4 309 aa9.36□□□□□ -0.91
PTCH1-206ENST00000421141 C20orf24Q9BUV8 137 aa9.36□□□□□ -0.91
PTCH1-206ENST00000421141 WDR13Q9H1Z4 485 aa9.36□□□□□ -0.91
PTCH1-206ENST00000421141 RNF122Q9H9V4 155 aa9.36□□□□□ -0.91
PTCH1-206ENST00000421141 TRBV5-3A0A0A0MS03 114 aa9.36□□□□□ -0.91
PTCH1-206ENST00000421141 MEX3AA1L020 520 aaKnown RBP9.36□□□□□ -0.91
PTCH1-206ENST00000421141 B3GALNT1O75752 331 aa9.36□□□□□ -0.91
PTCH1-206ENST00000421141 DAOP14920 347 aa9.36□□□□□ -0.91
PTCH1-206ENST00000421141 S100A12P80511 92 aa9.36□□□□□ -0.91
PTCH1-206ENST00000421141 MRPS11P82912 194 aaKnown RBP9.36□□□□□ -0.91
PTCH1-206ENST00000421141 CEACAM21Q3KPI0 293 aa9.36□□□□□ -0.91
PTCH1-206ENST00000421141 UBALD1Q8TB05 177 aa9.36□□□□□ -0.91
PTCH1-206ENST00000421141 CENPVL1A0A0U1RR11 272 aa9.36□□□□□ -0.91
PTCH1-206ENST00000421141 CA11O75493 328 aa9.36□□□□□ -0.91
PTCH1-206ENST00000421141 BTG1P62324 171 aa9.36□□□□□ -0.91
PTCH1-206ENST00000421141 COL10A1Q03692 680 aa9.36□□□□□ -0.91
PTCH1-206ENST00000421141 FAM168AQ92567 244 aa9.36□□□□□ -0.91
PTCH1-206ENST00000421141 LRRC3CA6NJW4 275 aa9.36□□□□□ -0.91
PTCH1-206ENST00000421141 PRSS12P56730 875 aa9.36□□□□□ -0.91
PTCH1-206ENST00000421141 ZNF770Q6IQ21 691 aaPredicted RBP9.36□□□□□ -0.91
PTCH1-206ENST00000421141 NFAM1Q8NET5 270 aaPredicted RBP9.36□□□□□ -0.91
PTCH1-206ENST00000421141 OR8G5Q8NG78 346 aa9.36□□□□□ -0.91
PTCH1-206ENST00000421141 GNPNAT1Q96EK6 184 aaPredicted RBP9.36□□□□□ -0.91
PTCH1-206ENST00000421141 MTCH1Q9NZJ7 389 aa9.36□□□□□ -0.91
PTCH1-206ENST00000421141 GEMIN2O14893 280 aaKnown RBP9.36□□□□□ -0.91
PTCH1-206ENST00000421141 AVPI1Q5T686 147 aa9.36□□□□□ -0.91
PTCH1-206ENST00000421141 HGDQ93099 445 aa9.36□□□□□ -0.91
PTCH1-206ENST00000421141 MS4A3Q96HJ5 214 aa9.36□□□□□ -0.91
PTCH1-206ENST00000421141 ADGRG7Q96K78 797 aa9.36□□□□□ -0.91
PTCH1-206ENST00000421141 PITPNC1Q9UKF7 332 aa9.36□□□□□ -0.91
PTCH1-206ENST00000421141 WIPI2Q9Y4P8 454 aa9.36□□□□□ -0.91
PTCH1-206ENST00000421141 OR5H14A6NHG9 310 aa9.36□□□□□ -0.91
PTCH1-206ENST00000421141 TAAR5O14804 337 aa9.36□□□□□ -0.91
PTCH1-206ENST00000421141 FGF7P21781 194 aa9.36□□□□□ -0.91
PTCH1-206ENST00000421141 C15orf54Q8N8G6 183 aa9.36□□□□□ -0.91
PTCH1-206ENST00000421141 ASB13Q8WXK3 278 aa9.36□□□□□ -0.91
PTCH1-206ENST00000421141 ACTR3CQ9C0K3 210 aaPredicted RBP9.36□□□□□ -0.91
PTCH1-206ENST00000421141 RASL12Q9NYN1 266 aa9.36□□□□□ -0.91
PTCH1-206ENST00000421141 XKRY2A2RUG3 117 aa9.35□□□□□ -0.91
PTCH1-206ENST00000421141 K7N7A8 449 aa9.35□□□□□ -0.91
PTCH1-206ENST00000421141 PI3P19957 117 aa9.35□□□□□ -0.91
PTCH1-206ENST00000421141 RAB4AP20338 218 aa9.35□□□□□ -0.91
PTCH1-206ENST00000421141 TNXAQ16473 311 aa9.35□□□□□ -0.91
PTCH1-206ENST00000421141 LYG2Q86SG7 212 aa9.35□□□□□ -0.91
PTCH1-206ENST00000421141 TMEM104Q8NE00 496 aa9.35□□□□□ -0.91
PTCH1-206ENST00000421141 NEU4Q8WWR8 484 aaPredicted RBP9.35□□□□□ -0.91
PTCH1-206ENST00000421141 ST8SIA2Q92186 375 aa9.35□□□□□ -0.91
PTCH1-206ENST00000421141 CYB5R1Q9UHQ9 305 aa9.35□□□□□ -0.91
PTCH1-206ENST00000421141 OR5H1A6NKK0 313 aa9.35□□□□□ -0.91
PTCH1-206ENST00000421141 APOC3P02656 99 aa9.35□□□□□ -0.91
PTCH1-206ENST00000421141 RPS4Y1P22090 263 aaKnown RBP9.35□□□□□ -0.91
PTCH1-206ENST00000421141 FGF9P31371 208 aaPredicted RBP9.35□□□□□ -0.91
PTCH1-206ENST00000421141 RPS4XP62701 263 aaKnown RBP9.35□□□□□ -0.91
PTCH1-206ENST00000421141 AADACL4Q5VUY2 407 aa9.35□□□□□ -0.91
PTCH1-206ENST00000421141 RHOUQ7L0Q8 258 aa9.35□□□□□ -0.91
PTCH1-206ENST00000421141 YIPF6Q96EC8 236 aa9.35□□□□□ -0.91
PTCH1-206ENST00000421141 SEC22CQ9BRL7 303 aa9.35□□□□□ -0.91
PTCH1-206ENST00000421141 BSPH1Q075Z2 132 aa9.35□□□□□ -0.91
PTCH1-206ENST00000421141 SLC25A42Q86VD7 318 aa9.35□□□□□ -0.91
PTCH1-206ENST00000421141 RNF141Q8WVD5 230 aa9.35□□□□□ -0.91
PTCH1-206ENST00000421141 RANGRFQ9HD47 186 aaPredicted RBP9.35□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms