RNA–Protein interactions for RNA: ENST00000419378.5

HMGN1-205, Transcript of high mobility group nucleosome binding domain 1, humanhuman

TSL 2

Gene HMGN1, Length 850 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1-205ENST00000419378 SDSLQ96GA7 329 aa5.68□□□□□ -1.5
HMGN1-205ENST00000419378 MYCBPQ99417 103 aaPredicted RBP5.68□□□□□ -1.5
HMGN1-205ENST00000419378 DCTN5Q9BTE1 182 aa5.68□□□□□ -1.5
HMGN1-205ENST00000419378 ELL3Q9HB65 397 aaPredicted RBP5.68□□□□□ -1.5
HMGN1-205ENST00000419378 HES4Q9HCC6 221 aa5.68□□□□□ -1.5
HMGN1-205ENST00000419378 RASL12Q9NYN1 266 aa5.68□□□□□ -1.5
HMGN1-205ENST00000419378 ONECUT1Q9UBC0 465 aa5.68□□□□□ -1.5
HMGN1-205ENST00000419378 SLC25A10Q9UBX3 287 aaPredicted RBP5.68□□□□□ -1.5
HMGN1-205ENST00000419378 HHLA2Q9UM44 414 aa5.68□□□□□ -1.5
HMGN1-205ENST00000419378 SLC7A11Q9UPY5 501 aa5.68□□□□□ -1.5
HMGN1-205ENST00000419378 UBE2J1Q9Y385 318 aaPredicted RBP5.68□□□□□ -1.5
HMGN1-205ENST00000419378 MAB21L2Q9Y586 359 aa5.68□□□□□ -1.5
HMGN1-205ENST00000419378 IGKV1-9A0A0C4DH69 117 aa5.67□□□□□ -1.5
HMGN1-205ENST00000419378 CENPVL3A0A0U1RRI6 287 aa5.67□□□□□ -1.5
HMGN1-205ENST00000419378 RFPL4AA6NLU0 287 aa5.67□□□□□ -1.5
HMGN1-205ENST00000419378 E9PI62 339 aa5.67□□□□□ -1.5
HMGN1-205ENST00000419378 RFPL4AL1F8VTS6 287 aa5.67□□□□□ -1.5
HMGN1-205ENST00000419378 F8VVB4 439 aa5.67□□□□□ -1.5
HMGN1-205ENST00000419378 F8VWA3 439 aa5.67□□□□□ -1.5
HMGN1-205ENST00000419378 CASQ2O14958 399 aaPredicted RBP5.67□□□□□ -1.5
HMGN1-205ENST00000419378 NXPH2O95156 264 aa5.67□□□□□ -1.5
HMGN1-205ENST00000419378 SERPINA3P01011 423 aa5.67□□□□□ -1.5
HMGN1-205ENST00000419378 MBPP02686 304 aaPredicted RBP5.67□□□□□ -1.5
HMGN1-205ENST00000419378 LIMS3P0CW19 117 aa5.67□□□□□ -1.5
HMGN1-205ENST00000419378 LIMS4P0CW20 117 aa5.67□□□□□ -1.5
HMGN1-205ENST00000419378 AZGP1P25311 298 aaKnown RBP5.67□□□□□ -1.5
HMGN1-205ENST00000419378 CEBPDP49716 269 aaPredicted RBP5.67□□□□□ -1.5
HMGN1-205ENST00000419378 FUT6P51993 359 aa5.67□□□□□ -1.5
HMGN1-205ENST00000419378 CAV3P56539 151 aa5.67□□□□□ -1.5
HMGN1-205ENST00000419378 FAM3BP58499 235 aaPredicted RBP5.67□□□□□ -1.5
HMGN1-205ENST00000419378 BPIFB3P59826 476 aa5.67□□□□□ -1.5
HMGN1-205ENST00000419378 ERVK11-1P61568 191 aa5.67□□□□□ -1.5
HMGN1-205ENST00000419378 ADARB1P78563 741 aaKnown RBP5.67□□□□□ -1.5
HMGN1-205ENST00000419378 MRPL28Q13084 256 aaKnown RBP5.67□□□□□ -1.5
HMGN1-205ENST00000419378 BAMBIQ13145 260 aa5.67□□□□□ -1.5
HMGN1-205ENST00000419378 ALKBH1Q13686 389 aaKnown RBP5.67□□□□□ -1.5
HMGN1-205ENST00000419378 SLC9A3R2Q15599 337 aa5.67□□□□□ -1.5
HMGN1-205ENST00000419378 DEFB112Q30KQ8 113 aa5.67□□□□□ -1.5
HMGN1-205ENST00000419378 KLHL22Q53GT1 634 aa5.67□□□□□ -1.5
HMGN1-205ENST00000419378 OGFRL1Q5TC84 451 aaPredicted RBP5.67□□□□□ -1.5
HMGN1-205ENST00000419378 TTC23Q5W5X9 447 aa5.67□□□□□ -1.5
HMGN1-205ENST00000419378 ACSM6Q6P461 480 aa5.67□□□□□ -1.5
HMGN1-205ENST00000419378 SLC25A26Q70HW3 274 aa5.67□□□□□ -1.5
HMGN1-205ENST00000419378 UTS2BQ765I0 119 aa5.67□□□□□ -1.5
HMGN1-205ENST00000419378 VMO1Q7Z5L0 202 aa5.67□□□□□ -1.5
HMGN1-205ENST00000419378 EGFL6Q8IUX8 553 aa5.67□□□□□ -1.5
HMGN1-205ENST00000419378 KIR3DL3Q8N743 410 aa5.67□□□□□ -1.5
HMGN1-205ENST00000419378 ZNF676Q8N7Q3 588 aa5.67□□□□□ -1.5
HMGN1-205ENST00000419378 SETD9Q8NE22 299 aa5.67□□□□□ -1.5
HMGN1-205ENST00000419378 DNAAF1Q8NEP3 725 aa5.67□□□□□ -1.5
HMGN1-205ENST00000419378 TMEM185AQ8NFB2 350 aa5.67□□□□□ -1.5
HMGN1-205ENST00000419378 OR13C3Q8NGS6 347 aa5.67□□□□□ -1.5
HMGN1-205ENST00000419378 LHX4Q969G2 390 aa5.67□□□□□ -1.5
HMGN1-205ENST00000419378 FGGYQ96C11 551 aa5.67□□□□□ -1.5
HMGN1-205ENST00000419378 BORCS8Q96FH0 119 aa5.67□□□□□ -1.5
HMGN1-205ENST00000419378 C1orf147Q96MC9 270 aaPredicted RBP5.67□□□□□ -1.5
HMGN1-205ENST00000419378 DUX5Q96PT3 197 aa5.67□□□□□ -1.5
HMGN1-205ENST00000419378 FGF20Q9NP95 211 aaPredicted RBP5.67□□□□□ -1.5
HMGN1-205ENST00000419378 SIRT7Q9NRC8 400 aa5.67□□□□□ -1.5
HMGN1-205ENST00000419378 LIN7CQ9NUP9 197 aaKnown RBP5.67□□□□□ -1.5
HMGN1-205ENST00000419378 MTCH1Q9NZJ7 389 aa5.67□□□□□ -1.5
HMGN1-205ENST00000419378 KPTNQ9Y664 436 aa5.67□□□□□ -1.5
HMGN1-205ENST00000419378 IGHV1-69DA0A0B4J2H0 117 aa5.66□□□□□ -1.5
HMGN1-205ENST00000419378 A0A1W2PQ09 198 aa5.66□□□□□ -1.5
HMGN1-205ENST00000419378 IRGMA1A4Y4 181 aa5.66□□□□□ -1.5
HMGN1-205ENST00000419378 TMEM212A6NML5 194 aa5.66□□□□□ -1.5
HMGN1-205ENST00000419378 CLDN34H7C241 214 aa5.66□□□□□ -1.5
HMGN1-205ENST00000419378 SLC1A7O00341 560 aa5.66□□□□□ -1.5
HMGN1-205ENST00000419378 IGHV1-69P01742 117 aa5.66□□□□□ -1.5
HMGN1-205ENST00000419378 TK1P04183 234 aa5.66□□□□□ -1.5
HMGN1-205ENST00000419378 HNRNPCP07910 306 aaKnown RBP eCLIP5.66□□□□□ -1.55e-6■■■□□ 18.1
HMGN1-205ENST00000419378 GNAO1P09471 354 aa5.66□□□□□ -1.5
HMGN1-205ENST00000419378 CCDC159P0C7I6 412 aa5.66□□□□□ -1.5
HMGN1-205ENST00000419378 ATF1P18846 271 aa5.66□□□□□ -1.5
HMGN1-205ENST00000419378 MYL12AP19105 171 aa5.66□□□□□ -1.5
HMGN1-205ENST00000419378 PRKACBP22694 351 aa5.66□□□□□ -1.5
HMGN1-205ENST00000419378 PRTN3P24158 256 aa5.66□□□□□ -1.5
HMGN1-205ENST00000419378 DCKP27707 260 aa5.66□□□□□ -1.5
HMGN1-205ENST00000419378 PRDX2P32119 198 aa5.66□□□□□ -1.5
HMGN1-205ENST00000419378 CAPGP40121 348 aa5.66□□□□□ -1.5
HMGN1-205ENST00000419378 RBP2P50120 134 aa5.66□□□□□ -1.5
HMGN1-205ENST00000419378 ETV1P50549 477 aa5.66□□□□□ -1.5
HMGN1-205ENST00000419378 GTF2A1P52655 376 aaPredicted RBP5.66□□□□□ -1.5
HMGN1-205ENST00000419378 CAPZA1P52907 286 aa5.66□□□□□ -1.5
HMGN1-205ENST00000419378 GBX2P52951 348 aaPredicted RBP5.66□□□□□ -1.5
HMGN1-205ENST00000419378 MTCP1P56278 107 aa5.66□□□□□ -1.5
HMGN1-205ENST00000419378 RPL15P61313 204 aaKnown RBP5.66□□□□□ -1.5
HMGN1-205ENST00000419378 GABPB1Q06547 395 aaPredicted RBP5.66□□□□□ -1.5
HMGN1-205ENST00000419378 IL18R1Q13478 541 aa5.66□□□□□ -1.5
HMGN1-205ENST00000419378 OR2G6Q5TZ20 316 aa5.66□□□□□ -1.5
HMGN1-205ENST00000419378 XAF1Q6GPH4 301 aa5.66□□□□□ -1.5
HMGN1-205ENST00000419378 LDLRAD3Q86YD5 345 aa5.66□□□□□ -1.5
HMGN1-205ENST00000419378 PDZD9Q8IXQ8 264 aa5.66□□□□□ -1.5
HMGN1-205ENST00000419378 FAM185AQ8N0U4 392 aa5.66□□□□□ -1.5
HMGN1-205ENST00000419378 ZNF561Q8N587 486 aa5.66□□□□□ -1.5
HMGN1-205ENST00000419378 DHRSXQ8N5I4 330 aa5.66□□□□□ -1.5
HMGN1-205ENST00000419378 Q8N7P7 452 aa5.66□□□□□ -1.5
HMGN1-205ENST00000419378 OR52L2PQ8NGH6 319 aa5.66□□□□□ -1.5
HMGN1-205ENST00000419378 OR13C9Q8NGT0 318 aa5.66□□□□□ -1.5
HMGN1-205ENST00000419378 OR5AK2Q8NH90 309 aa5.66□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 33.1 ms