RNA–Protein interactions for RNA: ENST00000416204.1

LINC01238-201, Transcript of long intergenic non-protein coding RNA 1238, humanhuman

TSL 2 BASIC

Gene LINC01238, Length 590 nt, Biotype lincRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01238-201ENST00000416204 SLC35E3Q7Z769 313 aa7.33□□□□□ -1.24
LINC01238-201ENST00000416204 STPG2Q8N412 459 aa7.33□□□□□ -1.24
LINC01238-201ENST00000416204 ZNF454Q8N9F8 522 aa7.33□□□□□ -1.24
LINC01238-201ENST00000416204 OR2T29Q8NH02 315 aa7.33□□□□□ -1.24
LINC01238-201ENST00000416204 OR8U1Q8NH10 309 aa7.33□□□□□ -1.24
LINC01238-201ENST00000416204 ZNF596Q8TC21 504 aa7.33□□□□□ -1.24
LINC01238-201ENST00000416204 CYGBQ8WWM9 190 aa7.33□□□□□ -1.24
LINC01238-201ENST00000416204 EMG1Q92979 244 aaKnown RBP7.33□□□□□ -1.24
LINC01238-201ENST00000416204 OR5B12Q96R08 314 aa7.33□□□□□ -1.24
LINC01238-201ENST00000416204 CITED4Q96RK1 184 aa7.33□□□□□ -1.24
LINC01238-201ENST00000416204 TSC22D3Q99576 134 aa7.33□□□□□ -1.24
LINC01238-201ENST00000416204 NIPSNAP1Q9BPW8 284 aa7.33□□□□□ -1.24
LINC01238-201ENST00000416204 ZMAT4Q9H898 229 aa7.33□□□□□ -1.24
LINC01238-201ENST00000416204 RBFOX1Q9NWB1 397 aaKnown RBP7.33□□□□□ -1.24
LINC01238-201ENST00000416204 BAIAP2Q9UQB8 552 aa7.33□□□□□ -1.24
LINC01238-201ENST00000416204 ORC6Q9Y5N6 252 aa7.33□□□□□ -1.24
LINC01238-201ENST00000416204 PRR23D1E9PI22 279 aaPredicted RBP7.32□□□□□ -1.24
LINC01238-201ENST00000416204 H3BN98 237 aa7.32□□□□□ -1.24
LINC01238-201ENST00000416204 LY6LH3BQJ8 138 aa7.32□□□□□ -1.24
LINC01238-201ENST00000416204 DHRS3O75911 302 aa7.32□□□□□ -1.24
LINC01238-201ENST00000416204 TTRP02766 147 aa7.32□□□□□ -1.24
LINC01238-201ENST00000416204 TFAP2AP05549 437 aa7.32□□□□□ -1.24
LINC01238-201ENST00000416204 PRR23D2P0DMB1 279 aaPredicted RBP7.32□□□□□ -1.24
LINC01238-201ENST00000416204 ALOX5APP20292 161 aa7.32□□□□□ -1.24
LINC01238-201ENST00000416204 MPZP25189 248 aa7.32□□□□□ -1.24
LINC01238-201ENST00000416204 MNDAP41218 407 aa7.32□□□□□ -1.24
LINC01238-201ENST00000416204 OR3A1P47881 315 aa7.32□□□□□ -1.24
LINC01238-201ENST00000416204 GLIPR1P48060 266 aa7.32□□□□□ -1.24
LINC01238-201ENST00000416204 NPBWR2P48146 333 aa7.32□□□□□ -1.24
LINC01238-201ENST00000416204 ALDH3B2P48448 385 aa7.32□□□□□ -1.24
LINC01238-201ENST00000416204 GP2P55259 537 aaKnown RBP7.32□□□□□ -1.24
LINC01238-201ENST00000416204 P2RX3P56373 397 aa7.32□□□□□ -1.24
LINC01238-201ENST00000416204 AESQ08117 197 aa7.32□□□□□ -1.24
LINC01238-201ENST00000416204 IL24Q13007 206 aa7.32□□□□□ -1.24
LINC01238-201ENST00000416204 LTC4SQ16873 150 aa7.32□□□□□ -1.24
LINC01238-201ENST00000416204 HLA-DRB5Q30154 266 aa7.32□□□□□ -1.24
LINC01238-201ENST00000416204 RBM48Q5RL73 367 aaKnown RBP7.32□□□□□ -1.24
LINC01238-201ENST00000416204 CPOQ8IVL8 374 aa7.32□□□□□ -1.24
LINC01238-201ENST00000416204 ZNF555Q8NEP9 628 aa7.32□□□□□ -1.24
LINC01238-201ENST00000416204 TEX47Q8TBZ9 253 aa7.32□□□□□ -1.24
LINC01238-201ENST00000416204 TOMM40LQ969M1 308 aa7.32□□□□□ -1.24
LINC01238-201ENST00000416204 RPEQ96AT9 228 aa7.32□□□□□ -1.24
LINC01238-201ENST00000416204 RNFT2Q96EX2 444 aa7.32□□□□□ -1.24
LINC01238-201ENST00000416204 IKZF2Q9UKS7 526 aa7.32□□□□□ -1.24
LINC01238-201ENST00000416204 COPS3Q9UNS2 423 aa7.32□□□□□ -1.24
LINC01238-201ENST00000416204 SLC7A11Q9UPY5 501 aa7.32□□□□□ -1.24
LINC01238-201ENST00000416204 DSCAML1Q8TD84 2053 aa7.31□□□□□ -1.24
LINC01238-201ENST00000416204 TRGV10A0A0A0MS01 117 aa7.31□□□□□ -1.24
LINC01238-201ENST00000416204 IGHV3-72A0A0B4J1Y9 119 aa7.31□□□□□ -1.24
LINC01238-201ENST00000416204 SLC16A6O15403 523 aa7.31□□□□□ -1.24
LINC01238-201ENST00000416204 E2F6O75461 281 aa7.31□□□□□ -1.24
LINC01238-201ENST00000416204 IGKV1D-33P01593 117 aa7.31□□□□□ -1.24
LINC01238-201ENST00000416204 IGKV1-33P01594 117 aa7.31□□□□□ -1.24
LINC01238-201ENST00000416204 IGLV3-1P01715 115 aa7.31□□□□□ -1.24
LINC01238-201ENST00000416204 SPNP16150 400 aa7.31□□□□□ -1.24
LINC01238-201ENST00000416204 PRKACAP17612 351 aa7.31□□□□□ -1.24
LINC01238-201ENST00000416204 BCL3P20749 454 aa7.31□□□□□ -1.24
LINC01238-201ENST00000416204 SLC6A1P30531 599 aa7.31□□□□□ -1.24
LINC01238-201ENST00000416204 CEACAM3P40198 252 aa7.31□□□□□ -1.24
LINC01238-201ENST00000416204 GNG10P50151 68 aa7.31□□□□□ -1.24
LINC01238-201ENST00000416204 SCN1BQ07699 218 aa7.31□□□□□ -1.24
LINC01238-201ENST00000416204 GPR50Q13585 617 aa7.31□□□□□ -1.24
LINC01238-201ENST00000416204 KIR2DS1Q14954 304 aa7.31□□□□□ -1.24
LINC01238-201ENST00000416204 UBE2V2Q15819 145 aa7.31□□□□□ -1.24
LINC01238-201ENST00000416204 SRSF7Q16629 238 aaKnown RBP eCLIP7.31□□□□□ -1.24
LINC01238-201ENST00000416204 CXorf66Q5JRM2 361 aaPredicted RBP7.31□□□□□ -1.24
LINC01238-201ENST00000416204 BCL2L15Q5TBC7 163 aa7.31□□□□□ -1.24
LINC01238-201ENST00000416204 TMEM42Q69YG0 159 aa7.31□□□□□ -1.24
LINC01238-201ENST00000416204 TEX38Q6PEX7 206 aa7.31□□□□□ -1.24
LINC01238-201ENST00000416204 RTN4RL2Q86UN3 420 aa7.31□□□□□ -1.24
LINC01238-201ENST00000416204 HAPLN4Q86UW8 402 aa7.31□□□□□ -1.24
LINC01238-201ENST00000416204 FOXRED2Q8IWF2 684 aa7.31□□□□□ -1.24
LINC01238-201ENST00000416204 C8orf59Q8N0T1 100 aaPredicted RBP7.31□□□□□ -1.24
LINC01238-201ENST00000416204 SETD9Q8NE22 299 aa7.31□□□□□ -1.24
LINC01238-201ENST00000416204 OR11H1Q8NG94 326 aa7.31□□□□□ -1.24
LINC01238-201ENST00000416204 OR14K1Q8NGZ2 314 aa7.31□□□□□ -1.24
LINC01238-201ENST00000416204 ISOC1Q96CN7 298 aa7.31□□□□□ -1.24
LINC01238-201ENST00000416204 APOL4Q9BPW4 351 aa7.31□□□□□ -1.24
LINC01238-201ENST00000416204 PKIBQ9C010 78 aa7.31□□□□□ -1.24
LINC01238-201ENST00000416204 GAL3ST2Q9H3Q3 398 aa7.31□□□□□ -1.24
LINC01238-201ENST00000416204 BLOC1S6Q9UL45 172 aa7.31□□□□□ -1.24
LINC01238-201ENST00000416204 UBE2J1Q9Y385 318 aaPredicted RBP7.31□□□□□ -1.24
LINC01238-201ENST00000416204 A0A1B0GTI1 187 aa7.3□□□□□ -1.24
LINC01238-201ENST00000416204 A0A1W2PPE3 182 aa7.3□□□□□ -1.24
LINC01238-201ENST00000416204 A0A1W2PPI3 338 aa7.3□□□□□ -1.24
LINC01238-201ENST00000416204 NCBP2LA6PVI3 153 aaKnown RBP7.3□□□□□ -1.24
LINC01238-201ENST00000416204 ZNF701M0R085 212 aaPredicted RBP7.3□□□□□ -1.24
LINC01238-201ENST00000416204 MGST3O14880 152 aa7.3□□□□□ -1.24
LINC01238-201ENST00000416204 IGHG2P01859 326 aa7.3□□□□□ -1.24
LINC01238-201ENST00000416204 ATP6V1B1P15313 513 aa7.3□□□□□ -1.24
LINC01238-201ENST00000416204 GPR12P47775 334 aa7.3□□□□□ -1.24
LINC01238-201ENST00000416204 REG1BP48304 166 aa7.3□□□□□ -1.24
LINC01238-201ENST00000416204 POU3F4P49335 361 aa7.3□□□□□ -1.24
LINC01238-201ENST00000416204 HMGA2P52926 109 aa7.3□□□□□ -1.24
LINC01238-201ENST00000416204 GABARAPL2P60520 117 aa7.3□□□□□ -1.24
LINC01238-201ENST00000416204 ZNF91Q05481 1191 aa7.3□□□□□ -1.24
LINC01238-201ENST00000416204 GINS1Q14691 196 aa7.3□□□□□ -1.24
LINC01238-201ENST00000416204 PNLIPRP3Q17RR3 467 aa7.3□□□□□ -1.24
LINC01238-201ENST00000416204 CNPY1Q3B7I2 92 aa7.3□□□□□ -1.24
LINC01238-201ENST00000416204 ZNF829Q3KNS6 432 aaPredicted RBP7.3□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 65.8 ms