RNA–Protein interactions for RNA: ENST00000415920.5

CPNE1-209, Transcript of copine 1, humanhuman

TSL 5

Gene CPNE1, Length 731 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-209ENST00000415920 NHLRC3Q5JS37 347 aa11.32□□□□□ -0.6
CPNE1-209ENST00000415920 NKAPLQ5M9Q1 402 aa11.32□□□□□ -0.6
CPNE1-209ENST00000415920 ATAD3CQ5T2N8 411 aa11.32□□□□□ -0.6
CPNE1-209ENST00000415920 CD177Q8N6Q3 437 aa11.32□□□□□ -0.6
CPNE1-209ENST00000415920 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP11.32□□□□□ -0.6
CPNE1-209ENST00000415920 SAMD12Q8N8I0 201 aa11.32□□□□□ -0.6
CPNE1-209ENST00000415920 ST8SIA4Q92187 359 aa11.32□□□□□ -0.6
CPNE1-209ENST00000415920 KCTD12Q96CX2 325 aaKnown RBP11.32□□□□□ -0.6
CPNE1-209ENST00000415920 DGCR14Q96DF8 476 aaKnown RBP11.32□□□□□ -0.6
CPNE1-209ENST00000415920 MRPS24Q96EL2 167 aaKnown RBP11.32□□□□□ -0.6
CPNE1-209ENST00000415920 NEIL1Q96FI4 390 aaPredicted RBP11.32□□□□□ -0.6
CPNE1-209ENST00000415920 C6orf62Q9GZU0 229 aaPredicted RBP11.32□□□□□ -0.6
CPNE1-209ENST00000415920 CHST6Q9GZX3 395 aa11.32□□□□□ -0.6
CPNE1-209ENST00000415920 LPAR5Q9H1C0 372 aa11.32□□□□□ -0.6
CPNE1-209ENST00000415920 ATG5Q9H1Y0 275 aa11.32□□□□□ -0.6
CPNE1-209ENST00000415920 PPA2Q9H2U2 334 aa11.32□□□□□ -0.6
CPNE1-209ENST00000415920 RHBDL2Q9NX52 303 aa11.32□□□□□ -0.6
CPNE1-209ENST00000415920 ZNF581Q9P0T4 197 aa11.32□□□□□ -0.6
CPNE1-209ENST00000415920 COMMD3Q9UBI1 195 aa11.32□□□□□ -0.6
CPNE1-209ENST00000415920 A6NHS1 94 aa11.31□□□□□ -0.6
CPNE1-209ENST00000415920 LDLRAD4O15165 306 aa11.31□□□□□ -0.6
CPNE1-209ENST00000415920 SIGLEC5O15389 551 aa11.31□□□□□ -0.6
CPNE1-209ENST00000415920 NDUFA2O43678 99 aa11.31□□□□□ -0.6
CPNE1-209ENST00000415920 TMEM127O75204 238 aa11.31□□□□□ -0.6
CPNE1-209ENST00000415920 FSTL3O95633 263 aa11.31□□□□□ -0.6
CPNE1-209ENST00000415920 IGHV2-5P01817 119 aa11.31□□□□□ -0.6
CPNE1-209ENST00000415920 RAB6AP20340 208 aa11.31□□□□□ -0.6
CPNE1-209ENST00000415920 PRDX2P32119 198 aa11.31□□□□□ -0.6
CPNE1-209ENST00000415920 PITPNBP48739 271 aa11.31□□□□□ -0.6
CPNE1-209ENST00000415920 SCAND1P57086 179 aa11.31□□□□□ -0.6
CPNE1-209ENST00000415920 SEC61A1P61619 476 aaKnown RBP11.31□□□□□ -0.6
CPNE1-209ENST00000415920 ATXN7L3Q14CW9 347 aaPredicted RBP11.31□□□□□ -0.6
CPNE1-209ENST00000415920 PAN3Q58A45 887 aaKnown RBP11.31□□□□□ -0.6
CPNE1-209ENST00000415920 UBE2NLQ5JXB2 153 aa11.31□□□□□ -0.6
CPNE1-209ENST00000415920 MZT2AQ6P582 158 aa11.31□□□□□ -0.6
CPNE1-209ENST00000415920 ZNF788Q6ZQV5 615 aa11.31□□□□□ -0.6
CPNE1-209ENST00000415920 ZNF561Q8N587 486 aa11.31□□□□□ -0.6
CPNE1-209ENST00000415920 ZNRF1Q8ND25 227 aa11.31□□□□□ -0.6
CPNE1-209ENST00000415920 Q8NFD4 153 aa11.31□□□□□ -0.6
CPNE1-209ENST00000415920 NEK7Q8TDX7 302 aa11.31□□□□□ -0.6
CPNE1-209ENST00000415920 ACOT12Q8WYK0 555 aa11.31□□□□□ -0.6
CPNE1-209ENST00000415920 SLC25A38Q96DW6 304 aa11.31□□□□□ -0.6
CPNE1-209ENST00000415920 DNTTIP1Q9H147 329 aa11.31□□□□□ -0.6
CPNE1-209ENST00000415920 PATZ1Q9HBE1 687 aaKnown RBP11.31□□□□□ -0.6
CPNE1-209ENST00000415920 FBLN5Q9UBX5 448 aa11.31□□□□□ -0.6
CPNE1-209ENST00000415920 MIOXQ9UGB7 285 aa11.31□□□□□ -0.6
CPNE1-209ENST00000415920 RAB22AQ9UL26 194 aa11.31□□□□□ -0.6
CPNE1-209ENST00000415920 SPATA2Q9UM82 520 aa11.31□□□□□ -0.6
CPNE1-209ENST00000415920 WNK2Q9Y3S1 2297 aa11.3□□□□□ -0.6
CPNE1-209ENST00000415920 A0A0A6YYD4 124 aa11.3□□□□□ -0.6
CPNE1-209ENST00000415920 F5H0A9 414 aaPredicted RBP11.3□□□□□ -0.6
CPNE1-209ENST00000415920 SLC33A1O00400 549 aaPredicted RBP11.3□□□□□ -0.6
CPNE1-209ENST00000415920 DEGS1O15121 323 aa11.3□□□□□ -0.6
CPNE1-209ENST00000415920 RGS5O15539 181 aa11.3□□□□□ -0.6
CPNE1-209ENST00000415920 WIPF1O43516 503 aa11.3□□□□□ -0.6
CPNE1-209ENST00000415920 NDUFB3O43676 98 aa11.3□□□□□ -0.6
CPNE1-209ENST00000415920 CHRM2P08172 466 aa11.3□□□□□ -0.6
CPNE1-209ENST00000415920 AMY2BP19961 511 aa11.3□□□□□ -0.6
CPNE1-209ENST00000415920 HNF1AP20823 631 aa11.3□□□□□ -0.6
CPNE1-209ENST00000415920 VEGFCP49767 419 aa11.3□□□□□ -0.6
CPNE1-209ENST00000415920 GNB2P62879 340 aa11.3□□□□□ -0.6
CPNE1-209ENST00000415920 EDDM3AQ14507 147 aa11.3□□□□□ -0.6
CPNE1-209ENST00000415920 ESCO2Q56NI9 601 aa11.3□□□□□ -0.6
CPNE1-209ENST00000415920 LRRC10Q5BKY1 277 aa11.3□□□□□ -0.6
CPNE1-209ENST00000415920 Q6P435 159 aa11.3□□□□□ -0.6
CPNE1-209ENST00000415920 FGFRL1Q8N441 504 aa11.3□□□□□ -0.6
CPNE1-209ENST00000415920 CHST4Q8NCG5 386 aa11.3□□□□□ -0.6
CPNE1-209ENST00000415920 MCFD2Q8NI22 146 aa11.3□□□□□ -0.6
CPNE1-209ENST00000415920 H1FXQ92522 213 aaKnown RBP11.3□□□□□ -0.6
CPNE1-209ENST00000415920 PHF21AQ96BD5 680 aa11.3□□□□□ -0.6
CPNE1-209ENST00000415920 SDSLQ96GA7 329 aa11.3□□□□□ -0.6
CPNE1-209ENST00000415920 TM2D1Q9BX74 207 aa11.3□□□□□ -0.6
CPNE1-209ENST00000415920 SLIRPQ9GZT3 109 aaKnown RBP11.3□□□□□ -0.6
CPNE1-209ENST00000415920 ING3Q9NXR8 418 aa11.3□□□□□ -0.6
CPNE1-209ENST00000415920 SLC25A10Q9UBX3 287 aaPredicted RBP11.3□□□□□ -0.6
CPNE1-209ENST00000415920 TENM1Q9UKZ4 2725 aa11.29□□□□□ -0.6
CPNE1-209ENST00000415920 A0A075B6Q4 140 aa11.29□□□□□ -0.6
CPNE1-209ENST00000415920 TMEM82A0PJX8 343 aa11.29□□□□□ -0.6
CPNE1-209ENST00000415920 METTL21EPA6NDL7 271 aa11.29□□□□□ -0.6
CPNE1-209ENST00000415920 FAM90A10PA6NDY2 464 aa11.29□□□□□ -0.6
CPNE1-209ENST00000415920 FAM90A18PA6NE21 464 aa11.29□□□□□ -0.6
CPNE1-209ENST00000415920 FAM90A16PA6NEW6 464 aa11.29□□□□□ -0.6
CPNE1-209ENST00000415920 FAM90A20PA6NIJ5 464 aa11.29□□□□□ -0.6
CPNE1-209ENST00000415920 FAM90A8PA6NJQ4 464 aa11.29□□□□□ -0.6
CPNE1-209ENST00000415920 FAM90A7PA6NKC0 464 aa11.29□□□□□ -0.6
CPNE1-209ENST00000415920 FAM90A22PA8MWA6 464 aa11.29□□□□□ -0.6
CPNE1-209ENST00000415920 FAM90A12PA8MX19 464 aa11.29□□□□□ -0.6
CPNE1-209ENST00000415920 FAM90A5PA8MXJ8 464 aa11.29□□□□□ -0.6
CPNE1-209ENST00000415920 FAM90A23PA8MXZ1 464 aa11.29□□□□□ -0.6
CPNE1-209ENST00000415920 DVL1O14640 695 aa11.29□□□□□ -0.6
CPNE1-209ENST00000415920 PSPNO60542 156 aa11.29□□□□□ -0.6
CPNE1-209ENST00000415920 HPGDSO60760 199 aa11.29□□□□□ -0.6
CPNE1-209ENST00000415920 PDCD6O75340 191 aa11.29□□□□□ -0.6
CPNE1-209ENST00000415920 EIF4EP06730 217 aaKnown RBP11.29□□□□□ -0.6
CPNE1-209ENST00000415920 FAM90A15PP0C7V4 464 aa11.29□□□□□ -0.6
CPNE1-209ENST00000415920 FAM90A13PP0C7W8 464 aa11.29□□□□□ -0.6
CPNE1-209ENST00000415920 FAM90A14PP0C7W9 464 aa11.29□□□□□ -0.6
CPNE1-209ENST00000415920 FAM90A24PP0C7X0 464 aa11.29□□□□□ -0.6
CPNE1-209ENST00000415920 NDUFB7P17568 137 aa11.29□□□□□ -0.6
CPNE1-209ENST00000415920 BLVRBP30043 206 aaPredicted RBP11.29□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 134 ms