RNA–Protein interactions for RNA: ENST00000413433.5

NOD1-203, Transcript of nucleotide binding oligomerization domain containing 1, humanhuman

TSL 1 (best)

Gene NOD1, Length 637 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NOD1-203ENST00000413433 APH1AQ96BI3 265 aa4.37□□□□□ -1.71
NOD1-203ENST00000413433 RNF145Q96MT1 663 aa4.37□□□□□ -1.71
NOD1-203ENST00000413433 KCNS3Q9BQ31 491 aa4.37□□□□□ -1.71
NOD1-203ENST00000413433 MRPL57Q9BQC6 102 aaKnown RBP4.37□□□□□ -1.71
NOD1-203ENST00000413433 BEX1Q9HBH7 125 aa4.37□□□□□ -1.71
NOD1-203ENST00000413433 TREM2Q9NZC2 230 aa4.37□□□□□ -1.71
NOD1-203ENST00000413433 CCDC59Q9P031 241 aaKnown RBP4.37□□□□□ -1.71
NOD1-203ENST00000413433 TMEM216Q9P0N5 145 aa4.37□□□□□ -1.71
NOD1-203ENST00000413433 DHRS4-AS1Q9P1J3 65 aa4.37□□□□□ -1.71
NOD1-203ENST00000413433 HIVEP2P31629 2446 aa4.36□□□□□ -1.71
NOD1-203ENST00000413433 ANK3Q12955 4377 aaKnown RBP4.36□□□□□ -1.71
NOD1-203ENST00000413433 TRAV6A0A075B6T7 132 aa4.36□□□□□ -1.71
NOD1-203ENST00000413433 A0A1W2PP18 115 aa4.36□□□□□ -1.71
NOD1-203ENST00000413433 DPRXA6NFQ7 191 aa4.36□□□□□ -1.71
NOD1-203ENST00000413433 CENPXA8MT69 81 aa4.36□□□□□ -1.71
NOD1-203ENST00000413433 UBFD1O14562 309 aaKnown RBP4.36□□□□□ -1.71
NOD1-203ENST00000413433 SS18L1O75177 396 aaPredicted RBP4.36□□□□□ -1.71
NOD1-203ENST00000413433 GCM2O75603 506 aaPredicted RBP4.36□□□□□ -1.71
NOD1-203ENST00000413433 LYZL6O75951 148 aa4.36□□□□□ -1.71
NOD1-203ENST00000413433 CD8AP01732 235 aa4.36□□□□□ -1.71
NOD1-203ENST00000413433 KRT16P08779 473 aa4.36□□□□□ -1.71
NOD1-203ENST00000413433 ACSM4P0C7M7 580 aa4.36□□□□□ -1.71
NOD1-203ENST00000413433 PGAM2P15259 253 aa4.36□□□□□ -1.71
NOD1-203ENST00000413433 TCN1P20061 433 aaPredicted RBP4.36□□□□□ -1.71
NOD1-203ENST00000413433 AGTR1P30556 359 aa4.36□□□□□ -1.71
NOD1-203ENST00000413433 PHBP35232 272 aa4.36□□□□□ -1.71
NOD1-203ENST00000413433 MAGEA12P43365 314 aa4.36□□□□□ -1.71
NOD1-203ENST00000413433 NPBWR2P48146 333 aa4.36□□□□□ -1.71
NOD1-203ENST00000413433 ATP12AP54707 1039 aa4.36□□□□□ -1.71
NOD1-203ENST00000413433 ACTA2P62736 377 aa4.36□□□□□ -1.71
NOD1-203ENST00000413433 ACTG2P63267 376 aa4.36□□□□□ -1.71
NOD1-203ENST00000413433 ACTC1P68032 377 aa4.36□□□□□ -1.71
NOD1-203ENST00000413433 ACTA1P68133 377 aa4.36□□□□□ -1.71
NOD1-203ENST00000413433 BSPH1Q075Z2 132 aa4.36□□□□□ -1.71
NOD1-203ENST00000413433 GPR176Q14439 515 aa4.36□□□□□ -1.71
NOD1-203ENST00000413433 ZNHIT3Q15649 155 aaPredicted RBP4.36□□□□□ -1.71
NOD1-203ENST00000413433 TOMM34Q15785 309 aaPredicted RBP4.36□□□□□ -1.71
NOD1-203ENST00000413433 PGGHGQ32M88 737 aa4.36□□□□□ -1.71
NOD1-203ENST00000413433 NDUFAF6Q330K2 333 aa4.36□□□□□ -1.71
NOD1-203ENST00000413433 TMEM176BQ3YBM2 270 aaPredicted RBP4.36□□□□□ -1.71
NOD1-203ENST00000413433 NCMAPQ5T1S8 102 aa4.36□□□□□ -1.71
NOD1-203ENST00000413433 CPTPQ5TA50 214 aa4.36□□□□□ -1.71
NOD1-203ENST00000413433 FAM71E1Q6IPT2 247 aa4.36□□□□□ -1.71
NOD1-203ENST00000413433 DEGS2Q6QHC5 323 aa4.36□□□□□ -1.71
NOD1-203ENST00000413433 C2orf66Q6UXQ4 117 aa4.36□□□□□ -1.71
NOD1-203ENST00000413433 ZNF600Q6ZNG1 722 aa4.36□□□□□ -1.71
NOD1-203ENST00000413433 ZNF546Q86UE3 836 aa4.36□□□□□ -1.71
NOD1-203ENST00000413433 COMTD1Q86VU5 262 aa4.36□□□□□ -1.71
NOD1-203ENST00000413433 PPP1R27Q86WC6 154 aa4.36□□□□□ -1.71
NOD1-203ENST00000413433 RDH10Q8IZV5 341 aa4.36□□□□□ -1.71
NOD1-203ENST00000413433 PUSL1Q8N0Z8 303 aaKnown RBP4.36□□□□□ -1.71
NOD1-203ENST00000413433 ARIH2OSQ8N7S6 290 aa4.36□□□□□ -1.71
NOD1-203ENST00000413433 CSNK1G2-AS1Q8NCQ2 148 aa4.36□□□□□ -1.71
NOD1-203ENST00000413433 OR2V1Q8NHB1 315 aa4.36□□□□□ -1.71
NOD1-203ENST00000413433 CLHC1Q8NHS4 586 aa4.36□□□□□ -1.71
NOD1-203ENST00000413433 DCAKDQ8WVC6 231 aa4.36□□□□□ -1.71
NOD1-203ENST00000413433 FGGYQ96C11 551 aa4.36□□□□□ -1.71
NOD1-203ENST00000413433 CHMP6Q96FZ7 201 aa4.36□□□□□ -1.71
NOD1-203ENST00000413433 PAIP2Q9BPZ3 127 aaKnown RBP4.36□□□□□ -1.71
NOD1-203ENST00000413433 ECSITQ9BQ95 431 aa4.36□□□□□ -1.71
NOD1-203ENST00000413433 C1QTNF6Q9BXI9 259 aa4.36□□□□□ -1.71
NOD1-203ENST00000413433 SELENOIQ9C0D9 397 aa4.36□□□□□ -1.71
NOD1-203ENST00000413433 CDC42EP4Q9H3Q1 356 aaKnown RBP4.36□□□□□ -1.71
NOD1-203ENST00000413433 NTN4Q9HB63 628 aa4.36□□□□□ -1.71
NOD1-203ENST00000413433 MCTS1Q9ULC4 181 aaKnown RBP4.36□□□□□ -1.71
NOD1-203ENST00000413433 GOLT1BQ9Y3E0 138 aa4.36□□□□□ -1.71
NOD1-203ENST00000413433 COL6A5A8TX70 2615 aa4.36□□□□□ -1.71
NOD1-203ENST00000413433 SHISA9B4DS77 424 aa4.35□□□□□ -1.71
NOD1-203ENST00000413433 PHF1O43189 567 aaPredicted RBP4.35□□□□□ -1.71
NOD1-203ENST00000413433 CD5LO43866 347 aa4.35□□□□□ -1.71
NOD1-203ENST00000413433 LY6HO94772 140 aa4.35□□□□□ -1.71
NOD1-203ENST00000413433 KCNK2O95069 426 aa4.35□□□□□ -1.71
NOD1-203ENST00000413433 PSMG1O95456 288 aa4.35□□□□□ -1.71
NOD1-203ENST00000413433 SERPINA5P05154 406 aa4.35□□□□□ -1.71
NOD1-203ENST00000413433 SNRPAP09012 282 aaKnown RBP4.35□□□□□ -1.71
NOD1-203ENST00000413433 PRPS2P11908 318 aa4.35□□□□□ -1.71
NOD1-203ENST00000413433 NEFHP12036 1026 aa4.35□□□□□ -1.71
NOD1-203ENST00000413433 NR2C1P13056 603 aa4.35□□□□□ -1.71
NOD1-203ENST00000413433 HPGDP15428 266 aa4.35□□□□□ -1.71
NOD1-203ENST00000413433 IGLL1P15814 213 aa4.35□□□□□ -1.71
NOD1-203ENST00000413433 TAC1P20366 129 aa4.35□□□□□ -1.71
NOD1-203ENST00000413433 PSMB1P20618 241 aaKnown RBP4.35□□□□□ -1.71
NOD1-203ENST00000413433 ME2P23368 584 aa4.35□□□□□ -1.71
NOD1-203ENST00000413433 IL32P24001 234 aa4.35□□□□□ -1.71
NOD1-203ENST00000413433 GPR4P46093 362 aa4.35□□□□□ -1.71
NOD1-203ENST00000413433 SERPINB9P50453 376 aa4.35□□□□□ -1.71
NOD1-203ENST00000413433 HILS1P60008 231 aa4.35□□□□□ -1.71
NOD1-203ENST00000413433 UBE2MP61081 183 aaKnown RBP4.35□□□□□ -1.71
NOD1-203ENST00000413433 SELENOTP62341 195 aa4.35□□□□□ -1.71
NOD1-203ENST00000413433 ZNF763Q0D2J5 394 aa4.35□□□□□ -1.71
NOD1-203ENST00000413433 FOXF1Q12946 379 aa4.35□□□□□ -1.71
NOD1-203ENST00000413433 TRAM2Q15035 370 aa4.35□□□□□ -1.71
NOD1-203ENST00000413433 AANATQ16613 207 aa4.35□□□□□ -1.71
NOD1-203ENST00000413433 IMPG1Q17R60 797 aa4.35□□□□□ -1.71
NOD1-203ENST00000413433 PLPPR5Q32ZL2 321 aa4.35□□□□□ -1.71
NOD1-203ENST00000413433 CHRFAM7AQ494W8 412 aa4.35□□□□□ -1.71
NOD1-203ENST00000413433 SPIN4Q56A73 249 aa4.35□□□□□ -1.71
NOD1-203ENST00000413433 KLF17Q5JT82 389 aaPredicted RBP4.35□□□□□ -1.71
NOD1-203ENST00000413433 LCE1AQ5T7P2 110 aa4.35□□□□□ -1.71
NOD1-203ENST00000413433 OLFML2AQ68BL7 652 aa4.35□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 43.8 ms