RNA–Protein interactions for RNA: ENST00000412342.5

HDAC8-210, Transcript of histone deacetylase 8, humanhuman

TSL 1 (best)

Gene HDAC8, Length 679 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC8-210ENST00000412342 C17orf98A8MV24 154 aa10.78□□□□□ -0.68
HDAC8-210ENST00000412342 CCRL2O00421 344 aa10.78□□□□□ -0.68
HDAC8-210ENST00000412342 DEGS1O15121 323 aa10.78□□□□□ -0.68
HDAC8-210ENST00000412342 TCF21O43680 179 aa10.78□□□□□ -0.68
HDAC8-210ENST00000412342 ZNF780AO75290 641 aaPredicted RBP10.78□□□□□ -0.68
HDAC8-210ENST00000412342 VENTXO95231 258 aa10.78□□□□□ -0.68
HDAC8-210ENST00000412342 IGHV1-69P01742 117 aa10.78□□□□□ -0.68
HDAC8-210ENST00000412342 SERPINA2P20848 420 aa10.78□□□□□ -0.68
HDAC8-210ENST00000412342 P2RX3P56373 397 aa10.78□□□□□ -0.68
HDAC8-210ENST00000412342 EDDM3BP56851 147 aa10.78□□□□□ -0.68
HDAC8-210ENST00000412342 BPIFB3P59826 476 aa10.78□□□□□ -0.68
HDAC8-210ENST00000412342 HILS1P60008 231 aa10.78□□□□□ -0.68
HDAC8-210ENST00000412342 ERVFRD-1P60508 538 aa10.78□□□□□ -0.68
HDAC8-210ENST00000412342 MEF2CQ06413 473 aaPredicted RBP10.78□□□□□ -0.68
HDAC8-210ENST00000412342 EDDM3AQ14507 147 aa10.78□□□□□ -0.68
HDAC8-210ENST00000412342 SLC22A6Q4U2R8 563 aa10.78□□□□□ -0.68
HDAC8-210ENST00000412342 SYT6Q5T7P8 510 aaPredicted RBP10.78□□□□□ -0.68
HDAC8-210ENST00000412342 GPR157Q5UAW9 335 aa10.78□□□□□ -0.68
HDAC8-210ENST00000412342 AWAT2Q6E213 333 aa10.78□□□□□ -0.68
HDAC8-210ENST00000412342 TMEM104Q8NE00 496 aa10.78□□□□□ -0.68
HDAC8-210ENST00000412342 PPP1R35Q8TAP8 253 aa10.78□□□□□ -0.68
HDAC8-210ENST00000412342 LHX4Q969G2 390 aa10.78□□□□□ -0.68
HDAC8-210ENST00000412342 NR1H4Q96RI1 486 aaPredicted RBP10.78□□□□□ -0.68
HDAC8-210ENST00000412342 PPA2Q9H2U2 334 aa10.78□□□□□ -0.68
HDAC8-210ENST00000412342 PRDM13Q9H4Q3 707 aa10.78□□□□□ -0.68
HDAC8-210ENST00000412342 OCEL1Q9H607 264 aa10.78□□□□□ -0.68
HDAC8-210ENST00000412342 METTL8Q9H825 291 aaKnown RBP10.78□□□□□ -0.68
HDAC8-210ENST00000412342 ESM1Q9NQ30 184 aa10.78□□□□□ -0.68
HDAC8-210ENST00000412342 ST3GAL6Q9Y274 331 aa10.78□□□□□ -0.68
HDAC8-210ENST00000412342 A0A0A6YYJ9 748 aa10.77□□□□□ -0.69
HDAC8-210ENST00000412342 MEX3AA1L020 520 aaKnown RBP10.77□□□□□ -0.69
HDAC8-210ENST00000412342 GEMIN2O14893 280 aaKnown RBP10.77□□□□□ -0.69
HDAC8-210ENST00000412342 SLC22A1O15245 554 aa10.77□□□□□ -0.69
HDAC8-210ENST00000412342 ARL6IP5O75915 188 aa10.77□□□□□ -0.69
HDAC8-210ENST00000412342 GTF2F2P13984 249 aa10.77□□□□□ -0.69
HDAC8-210ENST00000412342 GALP22466 123 aa10.77□□□□□ -0.69
HDAC8-210ENST00000412342 FPR2P25090 351 aa10.77□□□□□ -0.69
HDAC8-210ENST00000412342 CALRP27797 417 aaKnown RBP10.77□□□□□ -0.69
HDAC8-210ENST00000412342 PSMB9P28065 219 aa10.77□□□□□ -0.69
HDAC8-210ENST00000412342 PAX5Q02548 391 aa10.77□□□□□ -0.69
HDAC8-210ENST00000412342 SCN1BQ07699 218 aa10.77□□□□□ -0.69
HDAC8-210ENST00000412342 KLRD1Q13241 179 aa10.77□□□□□ -0.69
HDAC8-210ENST00000412342 GLT8D1Q68CQ7 371 aa10.77□□□□□ -0.69
HDAC8-210ENST00000412342 LINC00596Q86U02 117 aa10.77□□□□□ -0.69
HDAC8-210ENST00000412342 BPIFB2Q8N4F0 458 aa10.77□□□□□ -0.69
HDAC8-210ENST00000412342 SIGLECL1Q8N7X8 197 aa10.77□□□□□ -0.69
HDAC8-210ENST00000412342 SLC25A28Q96A46 364 aa10.77□□□□□ -0.69
HDAC8-210ENST00000412342 FOXRED1Q96CU9 486 aaPredicted RBP10.77□□□□□ -0.69
HDAC8-210ENST00000412342 MRPS24Q96EL2 167 aaKnown RBP10.77□□□□□ -0.69
HDAC8-210ENST00000412342 SUCNR1Q9BXA5 334 aa10.77□□□□□ -0.69
HDAC8-210ENST00000412342 MS4A7Q9GZW8 240 aaPredicted RBP10.77□□□□□ -0.69
HDAC8-210ENST00000412342 RCC2Q9P258 522 aaKnown RBP10.77□□□□□ -0.69
HDAC8-210ENST00000412342 LINC00312Q9Y6C7 94 aa10.77□□□□□ -0.69
HDAC8-210ENST00000412342 MDFIC2A0A1B0GVS7 189 aa10.76□□□□□ -0.69
HDAC8-210ENST00000412342 hADV38S2A0JD32 116 aa10.76□□□□□ -0.69
HDAC8-210ENST00000412342 TRIM64CA6NLI5 447 aa10.76□□□□□ -0.69
HDAC8-210ENST00000412342 RBP4P02753 201 aa10.76□□□□□ -0.69
HDAC8-210ENST00000412342 CSTBP04080 98 aaKnown RBP10.76□□□□□ -0.69
HDAC8-210ENST00000412342 ZNF728P0DKX0 622 aa10.76□□□□□ -0.69
HDAC8-210ENST00000412342 GLIPR1P48060 266 aa10.76□□□□□ -0.69
HDAC8-210ENST00000412342 QRFPP83859 136 aa10.76□□□□□ -0.69
HDAC8-210ENST00000412342 AESQ08117 197 aa10.76□□□□□ -0.69
HDAC8-210ENST00000412342 GPR176Q14439 515 aa10.76□□□□□ -0.69
HDAC8-210ENST00000412342 ATXN7L3Q14CW9 347 aaPredicted RBP10.76□□□□□ -0.69
HDAC8-210ENST00000412342 TAF9Q16594 264 aa10.76□□□□□ -0.69
HDAC8-210ENST00000412342 MPV17LQ2QL34 196 aa10.76□□□□□ -0.69
HDAC8-210ENST00000412342 KRTAP24-1Q3LI83 254 aa10.76□□□□□ -0.69
HDAC8-210ENST00000412342 PDZD9Q8IXQ8 264 aa10.76□□□□□ -0.69
HDAC8-210ENST00000412342 ZDHHC22Q8N966 263 aa10.76□□□□□ -0.69
HDAC8-210ENST00000412342 PLPPR1Q8TBJ4 325 aa10.76□□□□□ -0.69
HDAC8-210ENST00000412342 ZNF418Q8TF45 676 aaPredicted RBP10.76□□□□□ -0.69
HDAC8-210ENST00000412342 CYYR1Q96J86 154 aa10.76□□□□□ -0.69
HDAC8-210ENST00000412342 Q96M66 194 aa10.76□□□□□ -0.69
HDAC8-210ENST00000412342 S100A13Q99584 98 aa10.76□□□□□ -0.69
HDAC8-210ENST00000412342 MDFIQ99750 246 aa10.76□□□□□ -0.69
HDAC8-210ENST00000412342 ZNF696Q9H7X3 374 aa10.76□□□□□ -0.69
HDAC8-210ENST00000412342 GHRLQ9UBU3 117 aa10.76□□□□□ -0.69
HDAC8-210ENST00000412342 AK6Q9Y3D8 172 aaKnown RBP10.76□□□□□ -0.69
HDAC8-210ENST00000412342 KIAA2026Q5HYC2 2103 aa10.75□□□□□ -0.69
HDAC8-210ENST00000412342 TRAV1-2A0A0B4J238 106 aa10.75□□□□□ -0.69
HDAC8-210ENST00000412342 A0A1W2PPH5 198 aa10.75□□□□□ -0.69
HDAC8-210ENST00000412342 ODAMA1E959 279 aa10.75□□□□□ -0.69
HDAC8-210ENST00000412342 SLC17A2O00624 439 aa10.75□□□□□ -0.69
HDAC8-210ENST00000412342 OR7C1O76099 320 aaPredicted RBP10.75□□□□□ -0.69
HDAC8-210ENST00000412342 TNFAIP8O95379 198 aa10.75□□□□□ -0.69
HDAC8-210ENST00000412342 VSIG8P0DPA2 414 aa10.75□□□□□ -0.69
HDAC8-210ENST00000412342 MGMTP16455 207 aa10.75□□□□□ -0.69
HDAC8-210ENST00000412342 FGF9P31371 208 aaPredicted RBP10.75□□□□□ -0.69
HDAC8-210ENST00000412342 UBE2E1P51965 193 aa10.75□□□□□ -0.69
HDAC8-210ENST00000412342 GUCA2AQ02747 115 aa10.75□□□□□ -0.69
HDAC8-210ENST00000412342 UNC119Q13432 240 aa10.75□□□□□ -0.69
HDAC8-210ENST00000412342 BLMHQ13867 455 aa10.75□□□□□ -0.69
HDAC8-210ENST00000412342 NEDD8Q15843 81 aa10.75□□□□□ -0.69
HDAC8-210ENST00000412342 DEFB112Q30KQ8 113 aa10.75□□□□□ -0.69
HDAC8-210ENST00000412342 PAN3Q58A45 887 aaKnown RBP10.75□□□□□ -0.69
HDAC8-210ENST00000412342 RSBN1Q5VWQ0 802 aaPredicted RBP10.75□□□□□ -0.69
HDAC8-210ENST00000412342 NCR3LG1Q68D85 454 aa10.75□□□□□ -0.69
HDAC8-210ENST00000412342 SIGIRRQ6IA17 410 aa10.75□□□□□ -0.69
HDAC8-210ENST00000412342 PNKDQ8N490 385 aa10.75□□□□□ -0.69
HDAC8-210ENST00000412342 SUMF2Q8NBJ7 301 aa10.75□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 33.4 ms