RNA–Protein interactions for RNA: ENST00000410044.5

LSM5-207, Transcript of LSM5 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 3 BASIC

Gene LSM5, Length 687 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM5-207ENST00000410044 MMP27Q9H306 513 aa12.64□□□□□ -0.39
LSM5-207ENST00000410044 NCOR1P1Q9H4R4 102 aa12.64□□□□□ -0.39
LSM5-207ENST00000410044 NARFLQ9H6Q4 476 aa12.64□□□□□ -0.39
LSM5-207ENST00000410044 ZNF581Q9P0T4 197 aa12.64□□□□□ -0.39
LSM5-207ENST00000410044 COMMD3Q9UBI1 195 aa12.64□□□□□ -0.39
LSM5-207ENST00000410044 DUX4Q9UBX2 424 aa12.64□□□□□ -0.39
LSM5-207ENST00000410044 MALRD1Q5VYJ5 2156 aa12.64□□□□□ -0.39
LSM5-207ENST00000410044 SIRPB1O00241 398 aa12.63□□□□□ -0.39
LSM5-207ENST00000410044 MGST3O14880 152 aa12.63□□□□□ -0.39
LSM5-207ENST00000410044 PDCD6O75340 191 aa12.63□□□□□ -0.39
LSM5-207ENST00000410044 ERP29P30040 261 aaKnown RBP12.63□□□□□ -0.39
LSM5-207ENST00000410044 BLVRBP30043 206 aaPredicted RBP12.63□□□□□ -0.39
LSM5-207ENST00000410044 OR3A1P47881 315 aa12.63□□□□□ -0.39
LSM5-207ENST00000410044 VEGFCP49767 419 aa12.63□□□□□ -0.39
LSM5-207ENST00000410044 RBM39Q14498 530 aaKnown RBP12.63□□□□□ -0.39
LSM5-207ENST00000410044 LRRC10Q5BKY1 277 aa12.63□□□□□ -0.39
LSM5-207ENST00000410044 UBE2NLQ5JXB2 153 aa12.63□□□□□ -0.39
LSM5-207ENST00000410044 CMTM4Q8IZR5 234 aa12.63□□□□□ -0.39
LSM5-207ENST00000410044 OR8H2Q8N162 312 aa12.63□□□□□ -0.39
LSM5-207ENST00000410044 SAMD12Q8N8I0 201 aa12.63□□□□□ -0.39
LSM5-207ENST00000410044 SUMF2Q8NBJ7 301 aa12.63□□□□□ -0.39
LSM5-207ENST00000410044 OR4S1Q8NGB4 309 aa12.63□□□□□ -0.39
LSM5-207ENST00000410044 OR10R2Q8NGX6 335 aa12.63□□□□□ -0.39
LSM5-207ENST00000410044 DMRTB1Q96MA1 342 aa12.63□□□□□ -0.39
LSM5-207ENST00000410044 DCUN1D5Q9BTE7 237 aa12.63□□□□□ -0.39
LSM5-207ENST00000410044 ATG5Q9H1Y0 275 aa12.63□□□□□ -0.39
LSM5-207ENST00000410044 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP12.63□□□□□ -0.39
LSM5-207ENST00000410044 SLC25A10Q9UBX3 287 aaPredicted RBP12.63□□□□□ -0.39
LSM5-207ENST00000410044 DSCAML1Q8TD84 2053 aa12.62□□□□□ -0.39
LSM5-207ENST00000410044 MCRIP1C9JLW8 97 aa12.62□□□□□ -0.39
LSM5-207ENST00000410044 CTDSP2O14595 271 aa12.62□□□□□ -0.39
LSM5-207ENST00000410044 ECDO95905 644 aaPredicted RBP12.62□□□□□ -0.39
LSM5-207ENST00000410044 SELLP14151 372 aa12.62□□□□□ -0.39
LSM5-207ENST00000410044 IL2RGP31785 369 aa12.62□□□□□ -0.39
LSM5-207ENST00000410044 SEC61A1P61619 476 aaKnown RBP12.62□□□□□ -0.39
LSM5-207ENST00000410044 ARL6IP1Q15041 203 aa12.62□□□□□ -0.39
LSM5-207ENST00000410044 MOGAT2Q3SYC2 334 aa12.62□□□□□ -0.39
LSM5-207ENST00000410044 ESCO2Q56NI9 601 aa12.62□□□□□ -0.39
LSM5-207ENST00000410044 ATAD3CQ5T2N8 411 aa12.62□□□□□ -0.39
LSM5-207ENST00000410044 METAP1DQ6UB28 335 aaPredicted RBP12.62□□□□□ -0.39
LSM5-207ENST00000410044 Q6ZTK2 550 aa12.62□□□□□ -0.39
LSM5-207ENST00000410044 GAPTQ8N292 157 aa12.62□□□□□ -0.39
LSM5-207ENST00000410044 ASCC1Q8N9N2 400 aaKnown RBP12.62□□□□□ -0.39
LSM5-207ENST00000410044 MCFD2Q8NI22 146 aa12.62□□□□□ -0.39
LSM5-207ENST00000410044 S100A16Q96FQ6 103 aaKnown RBP12.62□□□□□ -0.39
LSM5-207ENST00000410044 NEDD4LQ96PU5 975 aa12.62□□□□□ -0.39
LSM5-207ENST00000410044 DPCDQ9BVM2 203 aaPredicted RBP12.62□□□□□ -0.39
LSM5-207ENST00000410044 SSBP3Q9BWW4 388 aaPredicted RBP12.62□□□□□ -0.39
LSM5-207ENST00000410044 CLN8Q9UBY8 286 aa12.62□□□□□ -0.39
LSM5-207ENST00000410044 PEX16Q9Y5Y5 336 aa12.62□□□□□ -0.39
LSM5-207ENST00000410044 NOTCH2Q04721 2471 aa12.61□□□□□ -0.39
LSM5-207ENST00000410044 CCDC168Q8NDH2 2452 aa12.61□□□□□ -0.39
LSM5-207ENST00000410044 KIAA1324LA8MWY0 1029 aaPredicted RBP12.61□□□□□ -0.39
LSM5-207ENST00000410044 FAM157AC9JC47 383 aa12.61□□□□□ -0.39
LSM5-207ENST00000410044 HPGDSO60760 199 aa12.61□□□□□ -0.39
LSM5-207ENST00000410044 CA11O75493 328 aa12.61□□□□□ -0.39
LSM5-207ENST00000410044 FOXH1O75593 365 aa12.61□□□□□ -0.39
LSM5-207ENST00000410044 TPPPO94811 219 aa12.61□□□□□ -0.39
LSM5-207ENST00000410044 GNB2P62879 340 aa12.61□□□□□ -0.39
LSM5-207ENST00000410044 CNPY1Q3B7I2 92 aa12.61□□□□□ -0.39
LSM5-207ENST00000410044 PAN3Q58A45 887 aaKnown RBP12.61□□□□□ -0.39
LSM5-207ENST00000410044 PLAC9Q5JTB6 97 aa12.61□□□□□ -0.39
LSM5-207ENST00000410044 CD276Q5ZPR3 534 aa12.61□□□□□ -0.39
LSM5-207ENST00000410044 LY6G5BQ8NDX9 201 aa12.61□□□□□ -0.39
LSM5-207ENST00000410044 TMEM185AQ8NFB2 350 aa12.61□□□□□ -0.39
LSM5-207ENST00000410044 C8orf46Q8TAG6 207 aa12.61□□□□□ -0.39
LSM5-207ENST00000410044 RAB3CQ96E17 227 aa12.61□□□□□ -0.39
LSM5-207ENST00000410044 PECRQ9BY49 303 aa12.61□□□□□ -0.39
LSM5-207ENST00000410044 PPA2Q9H2U2 334 aa12.61□□□□□ -0.39
LSM5-207ENST00000410044 MIXL1Q9H2W2 232 aa12.61□□□□□ -0.39
LSM5-207ENST00000410044 DIABLOQ9NR28 239 aa12.61□□□□□ -0.39
LSM5-207ENST00000410044 PLEKHJ1Q9NW61 149 aa12.61□□□□□ -0.39
LSM5-207ENST00000410044 KCNK7Q9Y2U2 307 aa12.61□□□□□ -0.39
LSM5-207ENST00000410044 MED13LQ71F56 2210 aa12.61□□□□□ -0.39
LSM5-207ENST00000410044 PPIAL4CA0A0B4J2A2 164 aa12.6□□□□□ -0.39
LSM5-207ENST00000410044 FUOMA2VDF0 154 aa12.6□□□□□ -0.39
LSM5-207ENST00000410044 POM121CA8CG34 1229 aa12.6□□□□□ -0.39
LSM5-207ENST00000410044 XRCC3O43542 346 aa12.6□□□□□ -0.39
LSM5-207ENST00000410044 EIF4EP06730 217 aaKnown RBP12.6□□□□□ -0.39
LSM5-207ENST00000410044 MELTFP08582 738 aa12.6□□□□□ -0.39
LSM5-207ENST00000410044 ELK1P19419 428 aa12.6□□□□□ -0.39
LSM5-207ENST00000410044 ZFP36P26651 326 aaKnown RBP12.6□□□□□ -0.39
LSM5-207ENST00000410044 PAX2Q02962 417 aa12.6□□□□□ -0.39
LSM5-207ENST00000410044 GRK1Q15835 563 aa12.6□□□□□ -0.39
LSM5-207ENST00000410044 ZNF260Q3ZCT1 412 aa12.6□□□□□ -0.39
LSM5-207ENST00000410044 SLC35E4Q6ICL7 350 aa12.6□□□□□ -0.39
LSM5-207ENST00000410044 BRICD5Q6PL45 260 aa12.6□□□□□ -0.39
LSM5-207ENST00000410044 C6orf201Q7Z4U5 140 aa12.6□□□□□ -0.39
LSM5-207ENST00000410044 CIARTQ8N365 385 aaPredicted RBP12.6□□□□□ -0.39
LSM5-207ENST00000410044 FGFRL1Q8N441 504 aa12.6□□□□□ -0.39
LSM5-207ENST00000410044 BPIFB2Q8N4F0 458 aa12.6□□□□□ -0.39
LSM5-207ENST00000410044 ST8SIA4Q92187 359 aa12.6□□□□□ -0.39
LSM5-207ENST00000410044 DACT3Q96B18 629 aaPredicted RBP12.6□□□□□ -0.39
LSM5-207ENST00000410044 ARHGAP5-AS1Q96IT6 56 aa12.6□□□□□ -0.39
LSM5-207ENST00000410044 SULT4A1Q9BR01 284 aa12.6□□□□□ -0.39
LSM5-207ENST00000410044 DCTN5Q9BTE1 182 aa12.6□□□□□ -0.39
LSM5-207ENST00000410044 FAAP24Q9BTP7 215 aa12.6□□□□□ -0.39
LSM5-207ENST00000410044 CHST6Q9GZX3 395 aa12.6□□□□□ -0.39
LSM5-207ENST00000410044 AKAP9Q99996 3911 aa12.6□□□□□ -0.39
LSM5-207ENST00000410044 ARHGAP32A7KAX9 2087 aa12.6□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 36.3 ms