RNA–Protein interactions for RNA: ENST00000409542.5

CHRNA1-205, Transcript of cholinergic receptor nicotinic alpha 1 subunit, humanhuman

TSL 3 BASIC

Gene CHRNA1, Length 1,460 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA1-205ENST00000409542 SAP30LQ9HAJ7 183 aa10.65□□□□□ -0.7
CHRNA1-205ENST00000409542 CDH20Q9HBT6 801 aa10.65□□□□□ -0.7
CHRNA1-205ENST00000409542 U3KQ87 197 aa10.65□□□□□ -0.7
CHRNA1-205ENST00000409542 SPRY3O43610 288 aa10.64□□□□□ -0.71
CHRNA1-205ENST00000409542 TSC22D2O75157 780 aa10.64□□□□□ -0.71
CHRNA1-205ENST00000409542 IGHV3-13P01766 116 aa10.64□□□□□ -0.71
CHRNA1-205ENST00000409542 MDKP21741 143 aaPredicted RBP10.64□□□□□ -0.71
CHRNA1-205ENST00000409542 GATA3P23771 443 aa10.64□□□□□ -0.71
CHRNA1-205ENST00000409542 CDAP32320 146 aa10.64□□□□□ -0.71
CHRNA1-205ENST00000409542 GNALP38405 381 aa10.64□□□□□ -0.71
CHRNA1-205ENST00000409542 MPV17P39210 176 aa10.64□□□□□ -0.71
CHRNA1-205ENST00000409542 ZNF121P58317 390 aaPredicted RBP10.64□□□□□ -0.71
CHRNA1-205ENST00000409542 SEC61A1P61619 476 aaKnown RBP10.64□□□□□ -0.71
CHRNA1-205ENST00000409542 BAMBIQ13145 260 aa10.64□□□□□ -0.71
CHRNA1-205ENST00000409542 MEF2DQ14814 521 aa10.64□□□□□ -0.71
CHRNA1-205ENST00000409542 ZMYND11Q15326 602 aa10.64□□□□□ -0.71
CHRNA1-205ENST00000409542 HFEQ30201 348 aa10.64□□□□□ -0.71
CHRNA1-205ENST00000409542 ZNF260Q3ZCT1 412 aa10.64□□□□□ -0.71
CHRNA1-205ENST00000409542 PGAP1Q75T13 922 aa10.64□□□□□ -0.71
CHRNA1-205ENST00000409542 ZNF680Q8NEM1 530 aa10.64□□□□□ -0.71
CHRNA1-205ENST00000409542 OR8B12Q8NGG6 310 aa10.64□□□□□ -0.71
CHRNA1-205ENST00000409542 OR52N4Q8NGI2 321 aa10.64□□□□□ -0.71
CHRNA1-205ENST00000409542 OR51E1Q8TCB6 317 aa10.64□□□□□ -0.71
CHRNA1-205ENST00000409542 NKX3-1Q99801 234 aaPredicted RBP10.64□□□□□ -0.71
CHRNA1-205ENST00000409542 ASH2LQ9UBL3 628 aa10.64□□□□□ -0.71
CHRNA1-205ENST00000409542 EIF3KQ9UBQ5 218 aaKnown RBP10.64□□□□□ -0.71
CHRNA1-205ENST00000409542 GPR160Q9UJ42 338 aa10.64□□□□□ -0.71
CHRNA1-205ENST00000409542 NUP50Q9UKX7 468 aa10.64□□□□□ -0.71
CHRNA1-205ENST00000409542 TANC2Q9HCD6 1990 aa10.64□□□□□ -0.71
CHRNA1-205ENST00000409542 NOTCH1P46531 2555 aa10.64□□□□□ -0.71
CHRNA1-205ENST00000409542 PLSCR5A0PG75 271 aa10.63□□□□□ -0.71
CHRNA1-205ENST00000409542 MEIS3P1A6NDR6 274 aa10.63□□□□□ -0.71
CHRNA1-205ENST00000409542 TMEM14DPA8MWL7 114 aa10.63□□□□□ -0.71
CHRNA1-205ENST00000409542 ZNF736B4DX44 427 aaPredicted RBP10.63□□□□□ -0.71
CHRNA1-205ENST00000409542 RAB27BO00194 218 aa10.63□□□□□ -0.71
CHRNA1-205ENST00000409542 DHHO43323 396 aa10.63□□□□□ -0.71
CHRNA1-205ENST00000409542 SLC22A5O76082 557 aa10.63□□□□□ -0.71
CHRNA1-205ENST00000409542 RGS11O94810 467 aa10.63□□□□□ -0.71
CHRNA1-205ENST00000409542 CYB5AP00167 134 aa10.63□□□□□ -0.71
CHRNA1-205ENST00000409542 RLN1P04808 185 aa10.63□□□□□ -0.71
CHRNA1-205ENST00000409542 ZNF735P0CB33 412 aa10.63□□□□□ -0.71
CHRNA1-205ENST00000409542 MSR1P21757 451 aa10.63□□□□□ -0.71
CHRNA1-205ENST00000409542 CX3CR1P49238 355 aa10.63□□□□□ -0.71
CHRNA1-205ENST00000409542 ZNF81P51508 661 aa10.63□□□□□ -0.71
CHRNA1-205ENST00000409542 TSPAN5P62079 268 aa10.63□□□□□ -0.71
CHRNA1-205ENST00000409542 UNC119Q13432 240 aa10.63□□□□□ -0.71
CHRNA1-205ENST00000409542 SLC9A3R2Q15599 337 aa10.63□□□□□ -0.71
CHRNA1-205ENST00000409542 MOGAT2Q3SYC2 334 aa10.63□□□□□ -0.71
CHRNA1-205ENST00000409542 SPATA46Q5T0L3 261 aa10.63□□□□□ -0.71
CHRNA1-205ENST00000409542 RBMS3Q6XE24 437 aaKnown RBP10.63□□□□□ -0.71
CHRNA1-205ENST00000409542 FTMTQ8N4E7 242 aa10.63□□□□□ -0.71
CHRNA1-205ENST00000409542 CPEB3Q8NE35 698 aaKnown RBP10.63□□□□□ -0.71
CHRNA1-205ENST00000409542 CCDC54Q8NEL0 328 aa10.63□□□□□ -0.71
CHRNA1-205ENST00000409542 OR2AK2Q8NG84 335 aa10.63□□□□□ -0.71
CHRNA1-205ENST00000409542 OR1J1Q8NGS3 322 aa10.63□□□□□ -0.71
CHRNA1-205ENST00000409542 TIMD4Q96H15 378 aa10.63□□□□□ -0.71
CHRNA1-205ENST00000409542 SLC2A8Q9NY64 477 aa10.63□□□□□ -0.71
CHRNA1-205ENST00000409542 LINC00862A6NCI5 91 aa10.62□□□□□ -0.71
CHRNA1-205ENST00000409542 ZSCAN5BA6NJL1 495 aa10.62□□□□□ -0.71
CHRNA1-205ENST00000409542 RER1O15258 196 aa10.62□□□□□ -0.71
CHRNA1-205ENST00000409542 IFNA7P01567 189 aa10.62□□□□□ -0.71
CHRNA1-205ENST00000409542 IGLV3-1P01715 115 aa10.62□□□□□ -0.71
CHRNA1-205ENST00000409542 CHRM2P08172 466 aa10.62□□□□□ -0.71
CHRNA1-205ENST00000409542 MMP7P09237 267 aaPredicted RBP10.62□□□□□ -0.71
CHRNA1-205ENST00000409542 VSIG8P0DPA2 414 aa10.62□□□□□ -0.71
CHRNA1-205ENST00000409542 OMGP23515 440 aa10.62□□□□□ -0.71
CHRNA1-205ENST00000409542 PRKXP51817 358 aa10.62□□□□□ -0.71
CHRNA1-205ENST00000409542 HIST1H3AP68431 136 aa10.62□□□□□ -0.71
CHRNA1-205ENST00000409542 IL13RA1P78552 427 aa10.62□□□□□ -0.71
CHRNA1-205ENST00000409542 ZNF154Q13106 437 aa10.62□□□□□ -0.71
CHRNA1-205ENST00000409542 TBC1D28Q2M2D7 210 aa10.62□□□□□ -0.71
CHRNA1-205ENST00000409542 HIST2H3PS2Q5TEC6 136 aa10.62□□□□□ -0.71
CHRNA1-205ENST00000409542 OR10K2Q6IF99 312 aa10.62□□□□□ -0.71
CHRNA1-205ENST00000409542 HIST2H3AQ71DI3 136 aa10.62□□□□□ -0.71
CHRNA1-205ENST00000409542 ZNF101Q8IZC7 436 aa10.62□□□□□ -0.71
CHRNA1-205ENST00000409542 OR5AS1Q8N127 324 aa10.62□□□□□ -0.71
CHRNA1-205ENST00000409542 LRRC18Q8N456 261 aa10.62□□□□□ -0.71
CHRNA1-205ENST00000409542 OR52B4Q8NGK2 314 aa10.62□□□□□ -0.71
CHRNA1-205ENST00000409542 OR13C9Q8NGT0 318 aa10.62□□□□□ -0.71
CHRNA1-205ENST00000409542 OR8S1Q8NH09 359 aa10.62□□□□□ -0.71
CHRNA1-205ENST00000409542 ELMOD3Q96FG2 381 aa10.62□□□□□ -0.71
CHRNA1-205ENST00000409542 CHIAQ9BZP6 476 aa10.62□□□□□ -0.71
CHRNA1-205ENST00000409542 BCL2L14Q9BZR8 327 aa10.62□□□□□ -0.71
CHRNA1-205ENST00000409542 PLEK2Q9NYT0 353 aa10.62□□□□□ -0.71
CHRNA1-205ENST00000409542 PURGQ9UJV8 347 aaKnown RBP10.62□□□□□ -0.71
CHRNA1-205ENST00000409542 PPIAL4EA0A075B759 164 aa10.61□□□□□ -0.71
CHRNA1-205ENST00000409542 IGHV3OR16-10A0A075B7F0 116 aa10.61□□□□□ -0.71
CHRNA1-205ENST00000409542 PPIAL4CA0A0B4J2A2 164 aa10.61□□□□□ -0.71
CHRNA1-205ENST00000409542 TMEM82A0PJX8 343 aa10.61□□□□□ -0.71
CHRNA1-205ENST00000409542 TMEM235A6NFC5 223 aa10.61□□□□□ -0.71
CHRNA1-205ENST00000409542 POM121CA8CG34 1229 aa10.61□□□□□ -0.71
CHRNA1-205ENST00000409542 DISC1C4P0D8 188 aa10.61□□□□□ -0.71
CHRNA1-205ENST00000409542 PPIAL4DF5H284 164 aa10.61□□□□□ -0.71
CHRNA1-205ENST00000409542 H3BUI4 141 aa10.61□□□□□ -0.71
CHRNA1-205ENST00000409542 NOS1APO75052 506 aaPredicted RBP10.61□□□□□ -0.71
CHRNA1-205ENST00000409542 IGHV2-70P01814 119 aa10.61□□□□□ -0.71
CHRNA1-205ENST00000409542 RNASE1P07998 156 aaKnown RBP10.61□□□□□ -0.71
CHRNA1-205ENST00000409542 UBBP0CG47 229 aa10.61□□□□□ -0.71
CHRNA1-205ENST00000409542 PPIAL4FP0DN26 164 aa10.61□□□□□ -0.71
CHRNA1-205ENST00000409542 TBPP20226 339 aa10.61□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 23.9 ms