RNA–Protein interactions for RNA: ENST00000409285.6

VSX1-203, Transcript of visual system homeobox 1, humanhuman

TSL 1 (best)

Gene VSX1, Length 1,486 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VSX1-203ENST00000409285 XRCC3O43542 346 aa17.04■□□□□ 0.32
VSX1-203ENST00000409285 PSPNO60542 156 aa17.04■□□□□ 0.32
VSX1-203ENST00000409285 TPPPO94811 219 aa17.04■□□□□ 0.32
VSX1-203ENST00000409285 IGHV2-5P01817 119 aa17.04■□□□□ 0.32
VSX1-203ENST00000409285 WNT2P09544 360 aa17.04■□□□□ 0.32
VSX1-203ENST00000409285 RPS2P15880 293 aaKnown RBP17.04■□□□□ 0.32
VSX1-203ENST00000409285 BLVRBP30043 206 aaPredicted RBP17.04■□□□□ 0.32
VSX1-203ENST00000409285 TMEM50BP56557 158 aa17.04■□□□□ 0.32
VSX1-203ENST00000409285 ARL6IP1Q15041 203 aa17.04■□□□□ 0.32
VSX1-203ENST00000409285 MOGAT2Q3SYC2 334 aa17.04■□□□□ 0.32
VSX1-203ENST00000409285 LYPD2Q6UXB3 125 aa17.04■□□□□ 0.32
VSX1-203ENST00000409285 OR8H2Q8N162 312 aa17.04■□□□□ 0.32
VSX1-203ENST00000409285 FAM216BQ8N7L0 139 aa17.04■□□□□ 0.32
VSX1-203ENST00000409285 SUMF2Q8NBJ7 301 aa17.04■□□□□ 0.32
VSX1-203ENST00000409285 PPP1R35Q8TAP8 253 aa17.04■□□□□ 0.32
VSX1-203ENST00000409285 PHF21AQ96BD5 680 aa17.04■□□□□ 0.32
VSX1-203ENST00000409285 NEIL1Q96FI4 390 aaPredicted RBP17.04■□□□□ 0.32
VSX1-203ENST00000409285 SHARPINQ9H0F6 387 aa17.04■□□□□ 0.32
VSX1-203ENST00000409285 DIABLOQ9NR28 239 aa17.04■□□□□ 0.32
VSX1-203ENST00000409285 KIAA2026Q5HYC2 2103 aa17.03■□□□□ 0.32
VSX1-203ENST00000409285 TMEM82A0PJX8 343 aa17.03■□□□□ 0.32
VSX1-203ENST00000409285 SIRPB1O00241 398 aa17.03■□□□□ 0.32
VSX1-203ENST00000409285 TFF1P04155 84 aa17.03■□□□□ 0.32
VSX1-203ENST00000409285 TK1P04183 234 aa17.03■□□□□ 0.32
VSX1-203ENST00000409285 CDK2P24941 298 aa17.03■□□□□ 0.32
VSX1-203ENST00000409285 OR3A1P47881 315 aa17.03■□□□□ 0.32
VSX1-203ENST00000409285 NPY4RP50391 375 aa17.03■□□□□ 0.32
VSX1-203ENST00000409285 C11orf91Q3C1V1 193 aa17.03■□□□□ 0.32
VSX1-203ENST00000409285 PLAC9Q5JTB6 97 aa17.03■□□□□ 0.32
VSX1-203ENST00000409285 ZNF841Q6ZN19 808 aa17.03■□□□□ 0.32
VSX1-203ENST00000409285 ZNRF1Q8ND25 227 aa17.03■□□□□ 0.32
VSX1-203ENST00000409285 CLDND2Q8NHS1 167 aa17.03■□□□□ 0.32
VSX1-203ENST00000409285 RAB3CQ96E17 227 aa17.03■□□□□ 0.32
VSX1-203ENST00000409285 NEDD4LQ96PU5 975 aa17.03■□□□□ 0.32
VSX1-203ENST00000409285 DPCDQ9BVM2 203 aaPredicted RBP17.03■□□□□ 0.32
VSX1-203ENST00000409285 A0A1B0GW55 424 aa17.02■□□□□ 0.32
VSX1-203ENST00000409285 MFNGO00587 321 aa17.02■□□□□ 0.32
VSX1-203ENST00000409285 GPR37O15354 613 aa17.02■□□□□ 0.32
VSX1-203ENST00000409285 DUX4L2P0CJ85 424 aa17.02■□□□□ 0.32
VSX1-203ENST00000409285 DUX4L3P0CJ86 424 aa17.02■□□□□ 0.32
VSX1-203ENST00000409285 DUX4L4P0CJ87 422 aa17.02■□□□□ 0.32
VSX1-203ENST00000409285 DUX4L5P0CJ88 424 aa17.02■□□□□ 0.32
VSX1-203ENST00000409285 DUX4L6P0CJ89 424 aa17.02■□□□□ 0.32
VSX1-203ENST00000409285 DUX4L7P0CJ90 424 aa17.02■□□□□ 0.32
VSX1-203ENST00000409285 HIST1H1DP16402 221 aaKnown RBP17.02■□□□□ 0.32
VSX1-203ENST00000409285 S100A5P33763 92 aa17.02■□□□□ 0.32
VSX1-203ENST00000409285 MNDAP41218 407 aa17.02■□□□□ 0.32
VSX1-203ENST00000409285 LMO4P61968 165 aa17.02■□□□□ 0.32
VSX1-203ENST00000409285 SCN1BQ07699 218 aa17.02■□□□□ 0.32
VSX1-203ENST00000409285 RBM39Q14498 530 aaKnown RBP17.02■□□□□ 0.32
VSX1-203ENST00000409285 PDCD1Q15116 288 aa17.02■□□□□ 0.32
VSX1-203ENST00000409285 PAN3Q58A45 887 aaKnown RBP17.02■□□□□ 0.32
VSX1-203ENST00000409285 ATAD3CQ5T2N8 411 aa17.02■□□□□ 0.32
VSX1-203ENST00000409285 DUX4L9Q6RFH8 374 aaPredicted RBP17.02■□□□□ 0.32
VSX1-203ENST00000409285 Q6ZTK2 550 aa17.02■□□□□ 0.32
VSX1-203ENST00000409285 ASCC1Q8N9N2 400 aaKnown RBP17.02■□□□□ 0.32
VSX1-203ENST00000409285 OR8B3Q8NGG8 313 aa17.02■□□□□ 0.32
VSX1-203ENST00000409285 OR5D13Q8NGL4 314 aa17.02■□□□□ 0.32
VSX1-203ENST00000409285 OR6Q1Q8NGQ2 317 aa17.02■□□□□ 0.32
VSX1-203ENST00000409285 RAB39BQ96DA2 213 aa17.02■□□□□ 0.32
VSX1-203ENST00000409285 ARHGAP5-AS1Q96IT6 56 aa17.02■□□□□ 0.32
VSX1-203ENST00000409285 OR8B2Q96RD0 313 aa17.02■□□□□ 0.32
VSX1-203ENST00000409285 DUX4Q9UBX2 424 aa17.02■□□□□ 0.32
VSX1-203ENST00000409285 PCDHB10Q9UN67 800 aa17.02■□□□□ 0.32
VSX1-203ENST00000409285 IGHV4-61A0A0C4DH41 118 aa17.01■□□□□ 0.31
VSX1-203ENST00000409285 SERPINE3A8MV23 424 aa17.01■□□□□ 0.31
VSX1-203ENST00000409285 MCRIP1C9JLW8 97 aa17.01■□□□□ 0.31
VSX1-203ENST00000409285 MGST3O14880 152 aa17.01■□□□□ 0.31
VSX1-203ENST00000409285 NDUFB3O43676 98 aa17.01■□□□□ 0.31
VSX1-203ENST00000409285 CA11O75493 328 aa17.01■□□□□ 0.31
VSX1-203ENST00000409285 FCN3O75636 299 aa17.01■□□□□ 0.31
VSX1-203ENST00000409285 GSTP1P09211 210 aaKnown RBP17.01■□□□□ 0.31
VSX1-203ENST00000409285 LRRC10Q5BKY1 277 aa17.01■□□□□ 0.31
VSX1-203ENST00000409285 TMEM69Q5SWH9 247 aa17.01■□□□□ 0.31
VSX1-203ENST00000409285 C6orf201Q7Z4U5 140 aa17.01■□□□□ 0.31
VSX1-203ENST00000409285 ST8SIA4Q92187 359 aa17.01■□□□□ 0.31
VSX1-203ENST00000409285 PECRQ9BY49 303 aa17.01■□□□□ 0.31
VSX1-203ENST00000409285 PLEKHJ1Q9NW61 149 aa17.01■□□□□ 0.31
VSX1-203ENST00000409285 RABL2AQ9UBK7 228 aaPredicted RBP17.01■□□□□ 0.31
VSX1-203ENST00000409285 SLC25A10Q9UBX3 287 aaPredicted RBP17.01■□□□□ 0.31
VSX1-203ENST00000409285 RABL2BQ9UNT1 228 aa17.01■□□□□ 0.31
VSX1-203ENST00000409285 A8MXK9 166 aa17■□□□□ 0.31
VSX1-203ENST00000409285 DVL1O14640 695 aa17■□□□□ 0.31
VSX1-203ENST00000409285 SELLP14151 372 aa17■□□□□ 0.31
VSX1-203ENST00000409285 USF1P22415 310 aaPredicted RBP17■□□□□ 0.31
VSX1-203ENST00000409285 TNFSF8P32971 234 aa17■□□□□ 0.31
VSX1-203ENST00000409285 TALDO1P37837 337 aa17■□□□□ 0.31
VSX1-203ENST00000409285 LOXL1Q08397 574 aaPredicted RBP17■□□□□ 0.31
VSX1-203ENST00000409285 CNIH2Q6PI25 160 aa17■□□□□ 0.31
VSX1-203ENST00000409285 METAP1DQ6UB28 335 aaPredicted RBP17■□□□□ 0.31
VSX1-203ENST00000409285 BAIAP2L2Q6UXY1 529 aa17■□□□□ 0.31
VSX1-203ENST00000409285 GAPTQ8N292 157 aa17■□□□□ 0.31
VSX1-203ENST00000409285 TMEM185AQ8NFB2 350 aa17■□□□□ 0.31
VSX1-203ENST00000409285 OR4S1Q8NGB4 309 aa17■□□□□ 0.31
VSX1-203ENST00000409285 Q96MF0 132 aa17■□□□□ 0.31
VSX1-203ENST00000409285 TSC22D3Q99576 134 aa17■□□□□ 0.31
VSX1-203ENST00000409285 SULT4A1Q9BR01 284 aa17■□□□□ 0.31
VSX1-203ENST00000409285 PPA2Q9H2U2 334 aa17■□□□□ 0.31
VSX1-203ENST00000409285 NARFLQ9H6Q4 476 aa17■□□□□ 0.31
VSX1-203ENST00000409285 EXTL2Q9UBQ6 330 aa17■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 39.5 ms