RNA–Protein interactions for RNA: ENST00000409225.2

CHMP3-203, Transcript of charged multivesicular body protein 3, humanhuman

TSL 2 BASIC

Gene CHMP3, Length 1,099 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP3-203ENST00000409225 EXOSC4Q9NPD3 245 aaKnown RBP13.03□□□□□ -0.32
CHMP3-203ENST00000409225 GSTK1Q9Y2Q3 226 aa13.03□□□□□ -0.32
CHMP3-203ENST00000409225 PLECQ15149 4684 aaKnown RBP13.03□□□□□ -0.32
CHMP3-203ENST00000409225 ODAMA1E959 279 aa13.02□□□□□ -0.33
CHMP3-203ENST00000409225 CCDC182A6NF36 153 aa13.02□□□□□ -0.33
CHMP3-203ENST00000409225 SH2D1BO14796 132 aa13.02□□□□□ -0.33
CHMP3-203ENST00000409225 GATBO75879 557 aaKnown RBP13.02□□□□□ -0.33
CHMP3-203ENST00000409225 OR2H2O95918 312 aa13.02□□□□□ -0.33
CHMP3-203ENST00000409225 ELANEP08246 267 aa13.02□□□□□ -0.33
CHMP3-203ENST00000409225 CDC42P60953 191 aa13.02□□□□□ -0.33
CHMP3-203ENST00000409225 C17orf58Q2M2W7 97 aa13.02□□□□□ -0.33
CHMP3-203ENST00000409225 SPIN3Q5JUX0 258 aa13.02□□□□□ -0.33
CHMP3-203ENST00000409225 ZNF322Q6U7Q0 402 aaPredicted RBP13.02□□□□□ -0.33
CHMP3-203ENST00000409225 PGAM4Q8N0Y7 254 aa13.02□□□□□ -0.33
CHMP3-203ENST00000409225 GIPC3Q8TF64 312 aa13.02□□□□□ -0.33
CHMP3-203ENST00000409225 LEAP2Q969E1 77 aa13.02□□□□□ -0.33
CHMP3-203ENST00000409225 GON7Q9BXV9 100 aa13.02□□□□□ -0.33
CHMP3-203ENST00000409225 SNX5Q9Y5X3 404 aa13.02□□□□□ -0.33
CHMP3-203ENST00000409225 NCBP2LA6PVI3 153 aaKnown RBP13.01□□□□□ -0.33
CHMP3-203ENST00000409225 J3QR06 171 aa13.01□□□□□ -0.33
CHMP3-203ENST00000409225 CYB5AP00167 134 aa13.01□□□□□ -0.33
CHMP3-203ENST00000409225 CCL1P22362 96 aa13.01□□□□□ -0.33
CHMP3-203ENST00000409225 CXCR4P61073 352 aa13.01□□□□□ -0.33
CHMP3-203ENST00000409225 SCN1BQ07699 218 aa13.01□□□□□ -0.33
CHMP3-203ENST00000409225 KRBOX4Q5JUW0 171 aa13.01□□□□□ -0.33
CHMP3-203ENST00000409225 RNF152Q8N8N0 203 aa13.01□□□□□ -0.33
CHMP3-203ENST00000409225 KIRREL1Q96J84 757 aa13.01□□□□□ -0.33
CHMP3-203ENST00000409225 EDA2RQ9HAV5 297 aa13.01□□□□□ -0.33
CHMP3-203ENST00000409225 ISYNA1Q9NPH2 558 aa13.01□□□□□ -0.33
CHMP3-203ENST00000409225 ALMS1Q8TCU4 4167 aa13□□□□□ -0.33
CHMP3-203ENST00000409225 TCRBV5S2A0A599 114 aa13□□□□□ -0.33
CHMP3-203ENST00000409225 ZNF729A6NN14 1252 aaPredicted RBP13□□□□□ -0.33
CHMP3-203ENST00000409225 SYT7O43581 403 aa13□□□□□ -0.33
CHMP3-203ENST00000409225 RPP14O95059 124 aaKnown RBP13□□□□□ -0.33
CHMP3-203ENST00000409225 SPNP16150 400 aa13□□□□□ -0.33
CHMP3-203ENST00000409225 RAB7AP51149 207 aa13□□□□□ -0.33
CHMP3-203ENST00000409225 ATP1B3P54709 279 aa13□□□□□ -0.33
CHMP3-203ENST00000409225 ACTR3P61158 418 aa13□□□□□ -0.33
CHMP3-203ENST00000409225 CDK5Q00535 292 aa13□□□□□ -0.33
CHMP3-203ENST00000409225 MADCAM1Q13477 382 aa13□□□□□ -0.33
CHMP3-203ENST00000409225 ATXN7L3Q14CW9 347 aaPredicted RBP13□□□□□ -0.33
CHMP3-203ENST00000409225 TMEM236Q5W0B7 351 aa13□□□□□ -0.33
CHMP3-203ENST00000409225 OR8H3Q8N146 312 aa13□□□□□ -0.33
CHMP3-203ENST00000409225 COQ2Q96H96 371 aa13□□□□□ -0.33
CHMP3-203ENST00000409225 CNN2Q99439 309 aaKnown RBP13□□□□□ -0.33
CHMP3-203ENST00000409225 CHST5Q9GZS9 411 aa13□□□□□ -0.33
CHMP3-203ENST00000409225 ABCG5Q9H222 651 aa13□□□□□ -0.33
CHMP3-203ENST00000409225 MAGIXQ9H6Y5 334 aa13□□□□□ -0.33
CHMP3-203ENST00000409225 HMG20AQ9NP66 347 aa13□□□□□ -0.33
CHMP3-203ENST00000409225 TRIM64CA6NLI5 447 aa12.99□□□□□ -0.33
CHMP3-203ENST00000409225 JTBO76095 146 aa12.99□□□□□ -0.33
CHMP3-203ENST00000409225 ZNF44P15621 663 aa12.99□□□□□ -0.33
CHMP3-203ENST00000409225 GNG10P50151 68 aa12.99□□□□□ -0.33
CHMP3-203ENST00000409225 BNIP1Q12981 228 aa12.99□□□□□ -0.33
CHMP3-203ENST00000409225 ZNF429Q86V71 674 aa12.99□□□□□ -0.33
CHMP3-203ENST00000409225 TGIF2LXQ8IUE1 241 aa12.99□□□□□ -0.33
CHMP3-203ENST00000409225 TM2D3Q9BRN9 247 aa12.99□□□□□ -0.33
CHMP3-203ENST00000409225 PPIL3Q9H2H8 161 aaKnown RBP12.99□□□□□ -0.33
CHMP3-203ENST00000409225 LIN7CQ9NUP9 197 aaKnown RBP12.99□□□□□ -0.33
CHMP3-203ENST00000409225 ACTR3BQ9P1U1 418 aa12.99□□□□□ -0.33
CHMP3-203ENST00000409225 MRM2Q9UI43 246 aaKnown RBP12.99□□□□□ -0.33
CHMP3-203ENST00000409225 PSG11Q9UQ72 335 aa12.99□□□□□ -0.33
CHMP3-203ENST00000409225 IGHV3-72A0A0B4J1Y9 119 aa12.98□□□□□ -0.33
CHMP3-203ENST00000409225 KBTBD11-OT1A0A1B0GTJ5 212 aa12.98□□□□□ -0.33
CHMP3-203ENST00000409225 RRP9O43818 475 aaKnown RBP12.98□□□□□ -0.33
CHMP3-203ENST00000409225 SAP30O75446 220 aa12.98□□□□□ -0.33
CHMP3-203ENST00000409225 SERPINA3P01011 423 aa12.98□□□□□ -0.33
CHMP3-203ENST00000409225 OR8U8P0C7N1 319 aa12.98□□□□□ -0.33
CHMP3-203ENST00000409225 OSMP13725 252 aa12.98□□□□□ -0.33
CHMP3-203ENST00000409225 GP9P14770 177 aa12.98□□□□□ -0.33
CHMP3-203ENST00000409225 GLP1RP43220 463 aa12.98□□□□□ -0.33
CHMP3-203ENST00000409225 RBP2P50120 134 aa12.98□□□□□ -0.33
CHMP3-203ENST00000409225 CFHR3Q02985 330 aa12.98□□□□□ -0.33
CHMP3-203ENST00000409225 LTC4SQ16873 150 aa12.98□□□□□ -0.33
CHMP3-203ENST00000409225 ASPHD1Q5U4P2 390 aa12.98□□□□□ -0.33
CHMP3-203ENST00000409225 MOB3BQ86TA1 216 aa12.98□□□□□ -0.33
CHMP3-203ENST00000409225 SLC35F2Q8IXU6 374 aa12.98□□□□□ -0.33
CHMP3-203ENST00000409225 DEFB107AQ8IZN7 70 aa12.98□□□□□ -0.33
CHMP3-203ENST00000409225 Q8N9W7 124 aa12.98□□□□□ -0.33
CHMP3-203ENST00000409225 OR1N2Q8NGR9 330 aa12.98□□□□□ -0.33
CHMP3-203ENST00000409225 EAF1Q96JC9 268 aaPredicted RBP12.98□□□□□ -0.33
CHMP3-203ENST00000409225 CCDC134Q9H6E4 229 aa12.98□□□□□ -0.33
CHMP3-203ENST00000409225 TVP23BQ9NYZ1 205 aa12.98□□□□□ -0.33
CHMP3-203ENST00000409225 LDLRAD4O15165 306 aa12.97□□□□□ -0.33
CHMP3-203ENST00000409225 SASH3O75995 380 aa12.97□□□□□ -0.33
CHMP3-203ENST00000409225 IGHG4P01861 327 aa12.97□□□□□ -0.33
CHMP3-203ENST00000409225 VDAC1P21796 283 aa12.97□□□□□ -0.33
CHMP3-203ENST00000409225 REG1BP48304 166 aa12.97□□□□□ -0.33
CHMP3-203ENST00000409225 MTCP1P56278 107 aa12.97□□□□□ -0.33
CHMP3-203ENST00000409225 ZNF616Q08AN1 781 aa12.97□□□□□ -0.33
CHMP3-203ENST00000409225 SRSF7Q16629 238 aaKnown RBP eCLIP12.97□□□□□ -0.33
CHMP3-203ENST00000409225 TMEM179BQ7Z7N9 219 aa12.97□□□□□ -0.33
CHMP3-203ENST00000409225 OR10X1Q8NGY0 326 aa12.97□□□□□ -0.33
CHMP3-203ENST00000409225 HAVCR2Q8TDQ0 301 aa12.97□□□□□ -0.33
CHMP3-203ENST00000409225 RFT1Q96AA3 541 aa12.97□□□□□ -0.33
CHMP3-203ENST00000409225 OR5B12Q96R08 314 aa12.97□□□□□ -0.33
CHMP3-203ENST00000409225 ADI1Q9BV57 179 aa12.97□□□□□ -0.33
CHMP3-203ENST00000409225 TEX12Q9BXU0 123 aa12.97□□□□□ -0.33
CHMP3-203ENST00000409225 GNB4Q9HAV0 340 aa12.97□□□□□ -0.33
CHMP3-203ENST00000409225 CALYQ9NYX4 217 aa12.97□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms