RNA–Protein interactions for RNA: ENST00000409020.5

NIF3L1-202, Transcript of NGG1 interacting factor 3 like 1, humanhuman

APPRIS P1 TSL 5 BASIC

Gene NIF3L1, Length 1,680 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIF3L1-202ENST00000409020 ATP6V1FQ16864 119 aa8.22□□□□□ -1.09
NIF3L1-202ENST00000409020 TBC1D28Q2M2D7 210 aa8.22□□□□□ -1.09
NIF3L1-202ENST00000409020 NRN1LQ496H8 165 aa8.22□□□□□ -1.09
NIF3L1-202ENST00000409020 FAM120AOSQ5T036 256 aa8.22□□□□□ -1.09
NIF3L1-202ENST00000409020 OR52W1Q6IF63 320 aa8.22□□□□□ -1.09
NIF3L1-202ENST00000409020 ZNF774Q6NX45 483 aa8.22□□□□□ -1.09
NIF3L1-202ENST00000409020 ZNF529Q6P280 563 aa8.22□□□□□ -1.09
NIF3L1-202ENST00000409020 ZNF573Q86YE8 665 aa8.22□□□□□ -1.09
NIF3L1-202ENST00000409020 BEST4Q8NFU0 473 aa8.22□□□□□ -1.09
NIF3L1-202ENST00000409020 OR2T35Q8NGX2 323 aa8.22□□□□□ -1.09
NIF3L1-202ENST00000409020 OR52J3Q8NH60 311 aa8.22□□□□□ -1.09
NIF3L1-202ENST00000409020 CNIH3Q8TBE1 160 aa8.22□□□□□ -1.09
NIF3L1-202ENST00000409020 SMIM12Q96EX1 92 aa8.22□□□□□ -1.09
NIF3L1-202ENST00000409020 DIRAS2Q96HU8 199 aa8.22□□□□□ -1.09
NIF3L1-202ENST00000409020 POM121L2Q96KW2 1035 aa8.22□□□□□ -1.09
NIF3L1-202ENST00000409020 S100A13Q99584 98 aa8.22□□□□□ -1.09
NIF3L1-202ENST00000409020 ALG12Q9BV10 488 aa8.22□□□□□ -1.09
NIF3L1-202ENST00000409020 MFFQ9GZY8 342 aa8.22□□□□□ -1.09
NIF3L1-202ENST00000409020 SMURF2Q9HAU4 748 aa8.22□□□□□ -1.09
NIF3L1-202ENST00000409020 CDH20Q9HBT6 801 aa8.22□□□□□ -1.09
NIF3L1-202ENST00000409020 ABCB9Q9NP78 766 aa8.22□□□□□ -1.09
NIF3L1-202ENST00000409020 DCAF13Q9NV06 445 aaKnown RBP8.22□□□□□ -1.09
NIF3L1-202ENST00000409020 CLEC5AQ9NY25 188 aa8.22□□□□□ -1.09
NIF3L1-202ENST00000409020 FBXL3Q9UKT7 428 aa8.22□□□□□ -1.09
NIF3L1-202ENST00000409020 TRRAPQ9Y4A5 3859 aa8.22□□□□□ -1.09
NIF3L1-202ENST00000409020 CMYA5Q8N3K9 4069 aa8.21□□□□□ -1.09
NIF3L1-202ENST00000409020 IGLV3-9A0A075B6K5 115 aa8.21□□□□□ -1.09
NIF3L1-202ENST00000409020 CBY3A6NI87 242 aa8.21□□□□□ -1.09
NIF3L1-202ENST00000409020 G3V3Q6 166 aa8.21□□□□□ -1.09
NIF3L1-202ENST00000409020 LMX1BO60663 402 aa8.21□□□□□ -1.09
NIF3L1-202ENST00000409020 GPANK1O95872 356 aa8.21□□□□□ -1.09
NIF3L1-202ENST00000409020 TGFAP01135 160 aa8.21□□□□□ -1.09
NIF3L1-202ENST00000409020 NGFP01138 241 aa8.21□□□□□ -1.09
NIF3L1-202ENST00000409020 SEMG1P04279 462 aa8.21□□□□□ -1.09
NIF3L1-202ENST00000409020 GIPP09681 153 aaPredicted RBP8.21□□□□□ -1.09
NIF3L1-202ENST00000409020 CTLA4P16410 223 aa8.21□□□□□ -1.09
NIF3L1-202ENST00000409020 CXCL2P19875 107 aa8.21□□□□□ -1.09
NIF3L1-202ENST00000409020 SDC2P34741 201 aa8.21□□□□□ -1.09
NIF3L1-202ENST00000409020 MAS1LP35410 378 aa8.21□□□□□ -1.09
NIF3L1-202ENST00000409020 MECP2P51608 486 aaKnown RBP8.21□□□□□ -1.09
NIF3L1-202ENST00000409020 RPS23P62266 143 aaKnown RBP8.21□□□□□ -1.09
NIF3L1-202ENST00000409020 SCGB2A2Q13296 93 aa8.21□□□□□ -1.09
NIF3L1-202ENST00000409020 NKPD1Q17RQ9 610 aa8.21□□□□□ -1.09
NIF3L1-202ENST00000409020 TMEM244Q5VVB8 128 aa8.21□□□□□ -1.09
NIF3L1-202ENST00000409020 LIPKQ5VXJ0 399 aa8.21□□□□□ -1.09
NIF3L1-202ENST00000409020 ALKAL2Q6UX46 152 aa8.21□□□□□ -1.09
NIF3L1-202ENST00000409020 GSG1LQ6UXU4 331 aa8.21□□□□□ -1.09
NIF3L1-202ENST00000409020 FOXL2NBQ6ZUU3 175 aa8.21□□□□□ -1.09
NIF3L1-202ENST00000409020 SSX7Q7RTT5 188 aa8.21□□□□□ -1.09
NIF3L1-202ENST00000409020 BAP18Q8IXM2 172 aa8.21□□□□□ -1.09
NIF3L1-202ENST00000409020 ACBD7Q8N6N7 88 aa8.21□□□□□ -1.09
NIF3L1-202ENST00000409020 OR10K1Q8NGX5 313 aa8.21□□□□□ -1.09
NIF3L1-202ENST00000409020 ELMOD3Q96FG2 381 aa8.21□□□□□ -1.09
NIF3L1-202ENST00000409020 SMIM8Q96KF7 97 aa8.21□□□□□ -1.09
NIF3L1-202ENST00000409020 RNF2Q99496 336 aa8.21□□□□□ -1.09
NIF3L1-202ENST00000409020 FUZQ9BT04 418 aa8.21□□□□□ -1.09
NIF3L1-202ENST00000409020 OR2H1Q9GZK4 316 aa8.21□□□□□ -1.09
NIF3L1-202ENST00000409020 GABARAPL1Q9H0R8 117 aa8.21□□□□□ -1.09
NIF3L1-202ENST00000409020 PRO1933Q9H354 126 aa8.21□□□□□ -1.09
NIF3L1-202ENST00000409020 POFUT1Q9H488 388 aa8.21□□□□□ -1.09
NIF3L1-202ENST00000409020 NAGKQ9UJ70 344 aa8.21□□□□□ -1.09
NIF3L1-202ENST00000409020 CDC42EP3Q9UKI2 254 aa8.21□□□□□ -1.09
NIF3L1-202ENST00000409020 V9GYS6 101 aa8.21□□□□□ -1.09
NIF3L1-202ENST00000409020 TCF21O43680 179 aa8.21□□□□□ -1.1
NIF3L1-202ENST00000409020 PRAF2O60831 178 aa8.21□□□□□ -1.1
NIF3L1-202ENST00000409020 RGS9O75916 674 aaPredicted RBP8.21□□□□□ -1.1
NIF3L1-202ENST00000409020 RGS11O94810 467 aa8.21□□□□□ -1.1
NIF3L1-202ENST00000409020 MPZL1O95297 269 aa8.21□□□□□ -1.1
NIF3L1-202ENST00000409020 SIX6O95475 246 aa8.21□□□□□ -1.1
NIF3L1-202ENST00000409020 CYB5R3P00387 301 aaPredicted RBP8.21□□□□□ -1.1
NIF3L1-202ENST00000409020 IFNA21P01568 189 aa8.21□□□□□ -1.1
NIF3L1-202ENST00000409020 H1F0P07305 194 aaKnown RBP8.21□□□□□ -1.1
NIF3L1-202ENST00000409020 ERCC1P07992 297 aaPredicted RBP8.21□□□□□ -1.1
NIF3L1-202ENST00000409020 CD14P08571 375 aa8.21□□□□□ -1.1
NIF3L1-202ENST00000409020 SNRPCP09234 159 aaKnown RBP8.21□□□□□ -1.1
NIF3L1-202ENST00000409020 FAM157CP0CG43 387 aa8.21□□□□□ -1.1
NIF3L1-202ENST00000409020 APLNRP35414 380 aa8.21□□□□□ -1.1
NIF3L1-202ENST00000409020 GGT2P36268 569 aa8.21□□□□□ -1.1
NIF3L1-202ENST00000409020 RPL4P36578 427 aaKnown RBP8.21□□□□□ -1.1
NIF3L1-202ENST00000409020 IFNGR2P38484 337 aa8.21□□□□□ -1.1
NIF3L1-202ENST00000409020 GLP1RP43220 463 aa8.21□□□□□ -1.1
NIF3L1-202ENST00000409020 RPS20P60866 119 aaKnown RBP8.21□□□□□ -1.1
NIF3L1-202ENST00000409020 CCL8P80075 99 aa8.21□□□□□ -1.1
NIF3L1-202ENST00000409020 DLK1P80370 383 aa8.21□□□□□ -1.1
NIF3L1-202ENST00000409020 PLP2Q04941 152 aa8.21□□□□□ -1.1
NIF3L1-202ENST00000409020 GPR176Q14439 515 aa8.21□□□□□ -1.1
NIF3L1-202ENST00000409020 SPRNQ5BIV9 151 aa8.21□□□□□ -1.1
NIF3L1-202ENST00000409020 NKAPLQ5M9Q1 402 aa8.21□□□□□ -1.1
NIF3L1-202ENST00000409020 FAM27BQ5VT28 67 aa8.21□□□□□ -1.1
NIF3L1-202ENST00000409020 FAM166AQ6J272 317 aa8.21□□□□□ -1.1
NIF3L1-202ENST00000409020 TMUB2Q71RG4 321 aa8.21□□□□□ -1.1
NIF3L1-202ENST00000409020 THNSL2Q86YJ6 484 aa8.21□□□□□ -1.1
NIF3L1-202ENST00000409020 Q8N402 240 aa8.21□□□□□ -1.1
NIF3L1-202ENST00000409020 SPICQ8N5J4 248 aa8.21□□□□□ -1.1
NIF3L1-202ENST00000409020 OR1J1Q8NGS3 322 aa8.21□□□□□ -1.1
NIF3L1-202ENST00000409020 SYNPRQ8TBG9 265 aa8.21□□□□□ -1.1
NIF3L1-202ENST00000409020 NPRL2Q8WTW4 380 aa8.21□□□□□ -1.1
NIF3L1-202ENST00000409020 CMBLQ96DG6 245 aa8.21□□□□□ -1.1
NIF3L1-202ENST00000409020 PHYHIPLQ96FC7 376 aa8.21□□□□□ -1.1
NIF3L1-202ENST00000409020 ZNF479Q96JC4 524 aa8.21□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 25.5 ms