RNA–Protein interactions for RNA: ENST00000404484.8

TPM1-208, Transcript of tropomyosin 1, humanhuman

TSL 1 (best) BASIC

Gene TPM1, Length 1,568 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-208ENST00000404484 DEGS1O15121 323 aa17.73■□□□□ 0.43
TPM1-208ENST00000404484 IGHV1-46P01743 117 aa17.73■□□□□ 0.43
TPM1-208ENST00000404484 IFNA6P05013 189 aa17.73■□□□□ 0.43
TPM1-208ENST00000404484 GLRA1P23415 457 aa17.73■□□□□ 0.43
TPM1-208ENST00000404484 APOBEC3AP31941 199 aaPredicted RBP17.73■□□□□ 0.43
TPM1-208ENST00000404484 TNFAIP6P98066 277 aaPredicted RBP17.73■□□□□ 0.43
TPM1-208ENST00000404484 PDCD1Q15116 288 aa17.73■□□□□ 0.43
TPM1-208ENST00000404484 VAX1Q5SQQ9 334 aa17.73■□□□□ 0.43
TPM1-208ENST00000404484 OR52W1Q6IF63 320 aa17.73■□□□□ 0.43
TPM1-208ENST00000404484 CADM3Q8N126 398 aa17.73■□□□□ 0.43
TPM1-208ENST00000404484 BPIFB2Q8N4F0 458 aa17.73■□□□□ 0.43
TPM1-208ENST00000404484 OR4D10Q8NGI6 311 aa17.73■□□□□ 0.43
TPM1-208ENST00000404484 OR51S1Q8NGJ8 323 aa17.73■□□□□ 0.43
TPM1-208ENST00000404484 OR5H2Q8NGV7 314 aa17.73■□□□□ 0.43
TPM1-208ENST00000404484 TINAGL1Q9GZM7 467 aaPredicted RBP17.73■□□□□ 0.43
TPM1-208ENST00000404484 RIMS4Q9H426 269 aaPredicted RBP17.73■□□□□ 0.43
TPM1-208ENST00000404484 SLC2A8Q9NY64 477 aa17.73■□□□□ 0.43
TPM1-208ENST00000404484 TRAV6A0A075B6T7 132 aa17.72■□□□□ 0.43
TPM1-208ENST00000404484 UBE2QL1A1L167 161 aa17.72■□□□□ 0.43
TPM1-208ENST00000404484 FAM221AA4D161 298 aa17.72■□□□□ 0.43
TPM1-208ENST00000404484 E7EQL1 145 aa17.72■□□□□ 0.43
TPM1-208ENST00000404484 ZNF44P15621 663 aa17.72■□□□□ 0.43
TPM1-208ENST00000404484 HRH1P35367 487 aa17.72■□□□□ 0.43
TPM1-208ENST00000404484 EFNB3Q15768 340 aa17.72■□□□□ 0.43
TPM1-208ENST00000404484 TATDN3Q17R31 274 aa17.72■□□□□ 0.43
TPM1-208ENST00000404484 ZNF826PQ6ZT77 177 aa17.72■□□□□ 0.43
TPM1-208ENST00000404484 NEK7Q8TDX7 302 aa17.72■□□□□ 0.43
TPM1-208ENST00000404484 LURAP1Q96LR2 239 aa17.72■□□□□ 0.43
TPM1-208ENST00000404484 SLC25A21Q9BQT8 299 aaPredicted RBP17.72■□□□□ 0.43
TPM1-208ENST00000404484 PDZD2O15018 2839 aa17.72■□□□□ 0.43
TPM1-208ENST00000404484 KNG1P01042 644 aa17.71■□□□□ 0.43
TPM1-208ENST00000404484 CD55P08174 381 aa17.71■□□□□ 0.43
TPM1-208ENST00000404484 FCGR3AP08637 254 aa17.71■□□□□ 0.43
TPM1-208ENST00000404484 DUSP1P28562 367 aa17.71■□□□□ 0.43
TPM1-208ENST00000404484 OR3A3P47888 321 aa17.71■□□□□ 0.43
TPM1-208ENST00000404484 CHRFAM7AQ494W8 412 aa17.71■□□□□ 0.43
TPM1-208ENST00000404484 AGAP6Q5VW22 663 aa17.71■□□□□ 0.43
TPM1-208ENST00000404484 FAM90A1Q86YD7 464 aa17.71■□□□□ 0.43
TPM1-208ENST00000404484 ARRDC1Q8N5I2 433 aa17.71■□□□□ 0.43
TPM1-208ENST00000404484 SUMF2Q8NBJ7 301 aa17.71■□□□□ 0.43
TPM1-208ENST00000404484 LRRC29Q8WV35 223 aa17.71■□□□□ 0.43
TPM1-208ENST00000404484 ITLN1Q8WWA0 313 aa17.71■□□□□ 0.43
TPM1-208ENST00000404484 CCDC168Q8NDH2 2452 aa17.71■□□□□ 0.43
TPM1-208ENST00000404484 A6NNC1 897 aa17.7■□□□□ 0.42
TPM1-208ENST00000404484 C17orf100A8MU93 164 aa17.7■□□□□ 0.42
TPM1-208ENST00000404484 PEX14O75381 377 aa17.7■□□□□ 0.42
TPM1-208ENST00000404484 TNFRSF1AP19438 455 aa17.7■□□□□ 0.42
TPM1-208ENST00000404484 MDH2P40926 338 aaKnown RBP17.7■□□□□ 0.42
TPM1-208ENST00000404484 TESK1Q15569 626 aa17.7■□□□□ 0.42
TPM1-208ENST00000404484 SRSF7Q16629 238 aaKnown RBP eCLIP17.7■□□□□ 0.42
TPM1-208ENST00000404484 FAM209AQ5JX71 171 aa17.7■□□□□ 0.42
TPM1-208ENST00000404484 Q6P435 159 aa17.7■□□□□ 0.42
TPM1-208ENST00000404484 ACP7Q6ZNF0 438 aa17.7■□□□□ 0.42
TPM1-208ENST00000404484 TMEM17Q86X19 198 aa17.7■□□□□ 0.42
TPM1-208ENST00000404484 PPP1R14BQ96C90 147 aa17.7■□□□□ 0.42
TPM1-208ENST00000404484 GINS4Q9BRT9 223 aa17.7■□□□□ 0.42
TPM1-208ENST00000404484 HDHD3Q9BSH5 251 aaPredicted RBP17.7■□□□□ 0.42
TPM1-208ENST00000404484 DPCDQ9BVM2 203 aaPredicted RBP17.7■□□□□ 0.42
TPM1-208ENST00000404484 ZNF286AQ9HBT8 521 aa17.7■□□□□ 0.42
TPM1-208ENST00000404484 CHMP1AQ9HD42 196 aaPredicted RBP17.7■□□□□ 0.42
TPM1-208ENST00000404484 POM121CA8CG34 1229 aa17.7■□□□□ 0.42
TPM1-208ENST00000404484 SRRM5B3KS81 715 aa17.7■□□□□ 0.42
TPM1-208ENST00000404484 B9A039 149 aa17.7■□□□□ 0.42
TPM1-208ENST00000404484 H7C1Q1 480 aa17.7■□□□□ 0.42
TPM1-208ENST00000404484 PRAF2O60831 178 aa17.7■□□□□ 0.42
TPM1-208ENST00000404484 ZNF735P0CB33 412 aa17.7■□□□□ 0.42
TPM1-208ENST00000404484 ARPC4P59998 168 aa17.7■□□□□ 0.42
TPM1-208ENST00000404484 MICBQ29980 383 aa17.7■□□□□ 0.42
TPM1-208ENST00000404484 SHEQ5VZ18 495 aa17.7■□□□□ 0.42
TPM1-208ENST00000404484 BRICD5Q6PL45 260 aa17.7■□□□□ 0.42
TPM1-208ENST00000404484 IDO2Q6ZQW0 420 aa17.7■□□□□ 0.42
TPM1-208ENST00000404484 MOGAT3Q86VF5 341 aa17.7■□□□□ 0.42
TPM1-208ENST00000404484 OR5AP2Q8NGF4 316 aa17.7■□□□□ 0.42
TPM1-208ENST00000404484 OR11L1Q8NGX0 322 aa17.7■□□□□ 0.42
TPM1-208ENST00000404484 DHRS9Q9BPW9 319 aa17.7■□□□□ 0.42
TPM1-208ENST00000404484 TMEM204Q9BSN7 226 aa17.7■□□□□ 0.42
TPM1-208ENST00000404484 EGLN1Q9GZT9 426 aa17.7■□□□□ 0.42
TPM1-208ENST00000404484 TREM2Q9NZC2 230 aa17.7■□□□□ 0.42
TPM1-208ENST00000404484 ZNF230Q9UIE0 474 aaPredicted RBP17.7■□□□□ 0.42
TPM1-208ENST00000404484 NPTNQ9Y639 398 aa17.7■□□□□ 0.42
TPM1-208ENST00000404484 TRAV24A0A0B4J272 114 aa17.69■□□□□ 0.42
TPM1-208ENST00000404484 DEFB108AA8MXU0 73 aa17.69■□□□□ 0.42
TPM1-208ENST00000404484 OR2H2O95918 312 aa17.69■□□□□ 0.42
TPM1-208ENST00000404484 HAND1O96004 215 aa17.69■□□□□ 0.42
TPM1-208ENST00000404484 PMP2P02689 132 aa17.69■□□□□ 0.42
TPM1-208ENST00000404484 GMFBP60983 142 aa17.69■□□□□ 0.42
TPM1-208ENST00000404484 PAN3Q58A45 887 aaKnown RBP17.69■□□□□ 0.42
TPM1-208ENST00000404484 CHAC2Q8WUX2 184 aa17.69■□□□□ 0.42
TPM1-208ENST00000404484 PIK3IP1Q96FE7 263 aa17.69■□□□□ 0.42
TPM1-208ENST00000404484 SLC6A7Q99884 636 aa17.69■□□□□ 0.42
TPM1-208ENST00000404484 MS4A5Q9H3V2 200 aa17.69■□□□□ 0.42
TPM1-208ENST00000404484 SEBOXQ9HB31 216 aaPredicted RBP17.69■□□□□ 0.42
TPM1-208ENST00000404484 DYNLRB1Q9NP97 96 aa17.69■□□□□ 0.42
TPM1-208ENST00000404484 ETAA1Q9NY74 926 aa17.69■□□□□ 0.42
TPM1-208ENST00000404484 CISD1Q9NZ45 108 aaKnown RBP17.69■□□□□ 0.42
TPM1-208ENST00000404484 ROS1P08922 2347 aa17.68■□□□□ 0.42
TPM1-208ENST00000404484 IFNL4K9M1U5 179 aa17.68■□□□□ 0.42
TPM1-208ENST00000404484 HS3ST1O14792 307 aa17.68■□□□□ 0.42
TPM1-208ENST00000404484 CSN2P05814 226 aa17.68■□□□□ 0.42
TPM1-208ENST00000404484 RAB25P57735 213 aa17.68■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms