RNA–Protein interactions for RNA: ENST00000403997.2

SDF4-203, Transcript of stromal cell derived factor 4, humanhuman

TSL 3

Gene SDF4, Length 728 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDF4-203ENST00000403997 NDNFQ8TB73 568 aa10.76□□□□□ -0.69
SDF4-203ENST00000403997 RPS4Y2Q8TD47 263 aa10.76□□□□□ -0.69
SDF4-203ENST00000403997 TNFAIP8L1Q8WVP5 186 aa10.76□□□□□ -0.69
SDF4-203ENST00000403997 RGP1Q92546 391 aaPredicted RBP10.76□□□□□ -0.69
SDF4-203ENST00000403997 CORO2AQ92828 525 aa10.76□□□□□ -0.69
SDF4-203ENST00000403997 CPNE2Q96FN4 548 aaPredicted RBP10.76□□□□□ -0.69
SDF4-203ENST00000403997 TMEM80Q96HE8 168 aa10.76□□□□□ -0.69
SDF4-203ENST00000403997 NKX3-1Q99801 234 aaPredicted RBP10.76□□□□□ -0.69
SDF4-203ENST00000403997 CLEC7AQ9BXN2 247 aa10.76□□□□□ -0.69
SDF4-203ENST00000403997 NPFFR1Q9GZQ6 430 aa10.76□□□□□ -0.69
SDF4-203ENST00000403997 GAL3ST2Q9H3Q3 398 aa10.76□□□□□ -0.69
SDF4-203ENST00000403997 CLEC2DQ9UHP7 191 aa10.76□□□□□ -0.69
SDF4-203ENST00000403997 DIMT1Q9UNQ2 313 aaKnown RBP10.76□□□□□ -0.69
SDF4-203ENST00000403997 SIRT4Q9Y6E7 314 aaPredicted RBP10.76□□□□□ -0.69
SDF4-203ENST00000403997 MINOS1-NBL1R4GNA1 71 aa10.76□□□□□ -0.69
SDF4-203ENST00000403997 H0YJX3 145 aa10.75□□□□□ -0.69
SDF4-203ENST00000403997 SLC33A1O00400 549 aaPredicted RBP10.75□□□□□ -0.69
SDF4-203ENST00000403997 HSPB6O14558 160 aa10.75□□□□□ -0.69
SDF4-203ENST00000403997 OGG1O15527 345 aa10.75□□□□□ -0.69
SDF4-203ENST00000403997 CHST1O43916 411 aa10.75□□□□□ -0.69
SDF4-203ENST00000403997 CDK2P24941 298 aa10.75□□□□□ -0.69
SDF4-203ENST00000403997 PPP3R1P63098 170 aa10.75□□□□□ -0.69
SDF4-203ENST00000403997 ADARB1P78563 741 aaKnown RBP10.75□□□□□ -0.69
SDF4-203ENST00000403997 RSU1Q15404 277 aa10.75□□□□□ -0.69
SDF4-203ENST00000403997 PRAMEF5Q5TYX0 476 aa10.75□□□□□ -0.69
SDF4-203ENST00000403997 OR52W1Q6IF63 320 aa10.75□□□□□ -0.69
SDF4-203ENST00000403997 ZNF529Q6P280 563 aa10.75□□□□□ -0.69
SDF4-203ENST00000403997 ABHD12Q8N2K0 398 aa10.75□□□□□ -0.69
SDF4-203ENST00000403997 DTX3Q8N9I9 347 aa10.75□□□□□ -0.69
SDF4-203ENST00000403997 OR2T6Q8NHC8 308 aa10.75□□□□□ -0.69
SDF4-203ENST00000403997 TMEM106AQ96A25 262 aa10.75□□□□□ -0.69
SDF4-203ENST00000403997 CDCA4Q9BXL8 241 aa10.75□□□□□ -0.69
SDF4-203ENST00000403997 FAM192AQ9GZU8 254 aa10.75□□□□□ -0.69
SDF4-203ENST00000403997 RANBP3Q9H6Z4 567 aaPredicted RBP10.75□□□□□ -0.69
SDF4-203ENST00000403997 TAS2R3Q9NYW6 316 aa10.75□□□□□ -0.69
SDF4-203ENST00000403997 ING4Q9UNL4 249 aa10.75□□□□□ -0.69
SDF4-203ENST00000403997 TCF19Q9Y242 345 aa10.75□□□□□ -0.69
SDF4-203ENST00000403997 ZNF281Q9Y2X9 895 aa10.75□□□□□ -0.69
SDF4-203ENST00000403997 PKD1L1Q8TDX9 2849 aa10.75□□□□□ -0.69
SDF4-203ENST00000403997 ODAMA1E959 279 aa10.74□□□□□ -0.69
SDF4-203ENST00000403997 A6NDX4 124 aa10.74□□□□□ -0.69
SDF4-203ENST00000403997 GABRPO00591 440 aa10.74□□□□□ -0.69
SDF4-203ENST00000403997 HTR3BO95264 441 aa10.74□□□□□ -0.69
SDF4-203ENST00000403997 ALDOBP05062 364 aa10.74□□□□□ -0.69
SDF4-203ENST00000403997 CSN2P05814 226 aa10.74□□□□□ -0.69
SDF4-203ENST00000403997 HTR1DP28221 377 aa10.74□□□□□ -0.69
SDF4-203ENST00000403997 CAPGP40121 348 aa10.74□□□□□ -0.69
SDF4-203ENST00000403997 PTGFRP43088 359 aa10.74□□□□□ -0.69
SDF4-203ENST00000403997 EFNB2P52799 333 aa10.74□□□□□ -0.69
SDF4-203ENST00000403997 SLC34A1Q06495 639 aa10.74□□□□□ -0.69
SDF4-203ENST00000403997 ST3GAL4Q11206 333 aa10.74□□□□□ -0.69
SDF4-203ENST00000403997 ATXN7L3Q14CW9 347 aaPredicted RBP10.74□□□□□ -0.69
SDF4-203ENST00000403997 ELP2Q6IA86 826 aa10.74□□□□□ -0.69
SDF4-203ENST00000403997 C11orf88Q6PI97 169 aa10.74□□□□□ -0.69
SDF4-203ENST00000403997 CCBE1Q6UXH8 406 aaPredicted RBP10.74□□□□□ -0.69
SDF4-203ENST00000403997 BAIAP2L2Q6UXY1 529 aa10.74□□□□□ -0.69
SDF4-203ENST00000403997 HEPN1Q6WQI6 88 aa10.74□□□□□ -0.69
SDF4-203ENST00000403997 Q6ZTK2 550 aa10.74□□□□□ -0.69
SDF4-203ENST00000403997 TMEM219Q86XT9 240 aa10.74□□□□□ -0.69
SDF4-203ENST00000403997 C8orf59Q8N0T1 100 aaPredicted RBP10.74□□□□□ -0.69
SDF4-203ENST00000403997 OR10K1Q8NGX5 313 aa10.74□□□□□ -0.69
SDF4-203ENST00000403997 OR52N1Q8NH53 320 aa10.74□□□□□ -0.69
SDF4-203ENST00000403997 GGHQ92820 318 aa10.74□□□□□ -0.69
SDF4-203ENST00000403997 GHSRQ92847 366 aa10.74□□□□□ -0.69
SDF4-203ENST00000403997 SMIM19Q96E16 107 aa10.74□□□□□ -0.69
SDF4-203ENST00000403997 COQ2Q96H96 371 aa10.74□□□□□ -0.69
SDF4-203ENST00000403997 TMEM138Q9NPI0 162 aa10.74□□□□□ -0.69
SDF4-203ENST00000403997 PITPNC1Q9UKF7 332 aa10.74□□□□□ -0.69
SDF4-203ENST00000403997 HSPE1-MOB4S4R3N1 261 aa10.74□□□□□ -0.69
SDF4-203ENST00000403997 FAM172BPA6NC97 362 aa10.73□□□□□ -0.69
SDF4-203ENST00000403997 EFCAB10A6NFE3 127 aa10.73□□□□□ -0.69
SDF4-203ENST00000403997 ANKRD65E5RJM6 399 aa10.73□□□□□ -0.69
SDF4-203ENST00000403997 F2RL2O00254 374 aa10.73□□□□□ -0.69
SDF4-203ENST00000403997 CDRT1O95170 752 aa10.73□□□□□ -0.69
SDF4-203ENST00000403997 LALBAP00709 142 aa10.73□□□□□ -0.69
SDF4-203ENST00000403997 JUNBP17275 347 aaPredicted RBP10.73□□□□□ -0.69
SDF4-203ENST00000403997 OR3A4PP47883 348 aa10.73□□□□□ -0.69
SDF4-203ENST00000403997 HERPUD1Q15011 391 aa10.73□□□□□ -0.69
SDF4-203ENST00000403997 PAN3Q58A45 887 aaKnown RBP10.73□□□□□ -0.69
SDF4-203ENST00000403997 DDI2Q5TDH0 399 aa10.73□□□□□ -0.69
SDF4-203ENST00000403997 RTN4RL2Q86UN3 420 aa10.73□□□□□ -0.69
SDF4-203ENST00000403997 ZFP41Q8N8Y5 198 aa10.73□□□□□ -0.69
SDF4-203ENST00000403997 OR4D6Q8NGJ1 314 aa10.73□□□□□ -0.69
SDF4-203ENST00000403997 OR13C5Q8NGS8 318 aa10.73□□□□□ -0.69
SDF4-203ENST00000403997 ZNF596Q8TC21 504 aa10.73□□□□□ -0.69
SDF4-203ENST00000403997 ORAI1Q96D31 301 aa10.73□□□□□ -0.69
SDF4-203ENST00000403997 METTL9Q9H1A3 318 aa10.73□□□□□ -0.69
SDF4-203ENST00000403997 PPIL3Q9H2H8 161 aaKnown RBP10.73□□□□□ -0.69
SDF4-203ENST00000403997 MMP27Q9H306 513 aa10.73□□□□□ -0.69
SDF4-203ENST00000403997 OR6C3Q9NZP0 311 aa10.73□□□□□ -0.69
SDF4-203ENST00000403997 DPM3Q9P2X0 92 aa10.73□□□□□ -0.69
SDF4-203ENST00000403997 FOXJ3Q9UPW0 622 aa10.73□□□□□ -0.69
SDF4-203ENST00000403997 TRAV24A0A0B4J272 114 aa10.72□□□□□ -0.69
SDF4-203ENST00000403997 H3BUI4 141 aa10.72□□□□□ -0.69
SDF4-203ENST00000403997 TOR1AO14656 332 aa10.72□□□□□ -0.69
SDF4-203ENST00000403997 KCNAB3O43448 404 aa10.72□□□□□ -0.69
SDF4-203ENST00000403997 XPNPEP2O43895 674 aa10.72□□□□□ -0.69
SDF4-203ENST00000403997 CSTBP04080 98 aaKnown RBP10.72□□□□□ -0.69
SDF4-203ENST00000403997 GNAO1P09471 354 aa10.72□□□□□ -0.69
SDF4-203ENST00000403997 VSIG10L2P0DP72 767 aa10.72□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 38.8 ms