RNA–Protein interactions for RNA: ENST00000403408.2

SPTLC1P3-201, Transcript of serine palmitoyltransferase long chain base subunit 1 pseudogene 3, humanhuman

BASIC

Gene SPTLC1P3, Length 259 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTLC1P3-201ENST00000403408 Q6P435 159 aa9.24□□□□□ -0.93
SPTLC1P3-201ENST00000403408 SSX6Q7RTT6 188 aa9.24□□□□□ -0.93
SPTLC1P3-201ENST00000403408 BCDIN3DQ7Z5W3 292 aaKnown RBP9.24□□□□□ -0.93
SPTLC1P3-201ENST00000403408 HS3ST5Q8IZT8 346 aa9.24□□□□□ -0.93
SPTLC1P3-201ENST00000403408 FAM58AQ8N1B3 248 aa9.24□□□□□ -0.93
SPTLC1P3-201ENST00000403408 Q8N9W7 124 aa9.24□□□□□ -0.93
SPTLC1P3-201ENST00000403408 OR11H1Q8NG94 326 aa9.24□□□□□ -0.93
SPTLC1P3-201ENST00000403408 OR2T29Q8NH02 315 aa9.24□□□□□ -0.93
SPTLC1P3-201ENST00000403408 MYOZ3Q8TDC0 251 aa9.24□□□□□ -0.93
SPTLC1P3-201ENST00000403408 TOMM40LQ969M1 308 aa9.24□□□□□ -0.93
SPTLC1P3-201ENST00000403408 HSPB9Q9BQS6 159 aa9.24□□□□□ -0.93
SPTLC1P3-201ENST00000403408 KLK15Q9H2R5 256 aa9.24□□□□□ -0.93
SPTLC1P3-201ENST00000403408 GAL3ST2Q9H3Q3 398 aa9.24□□□□□ -0.93
SPTLC1P3-201ENST00000403408 ING3Q9NXR8 418 aa9.24□□□□□ -0.93
SPTLC1P3-201ENST00000403408 IKZF2Q9UKS7 526 aa9.24□□□□□ -0.93
SPTLC1P3-201ENST00000403408 VPS13DQ5THJ4 4388 aa9.23□□□□□ -0.93
SPTLC1P3-201ENST00000403408 IGHV3-72A0A0B4J1Y9 119 aa9.23□□□□□ -0.93
SPTLC1P3-201ENST00000403408 DHRS7CA6NNS2 312 aa9.23□□□□□ -0.93
SPTLC1P3-201ENST00000403408 J3QR06 171 aa9.23□□□□□ -0.93
SPTLC1P3-201ENST00000403408 PRKACAP17612 351 aa9.23□□□□□ -0.93
SPTLC1P3-201ENST00000403408 NFYBP25208 207 aa9.23□□□□□ -0.93
SPTLC1P3-201ENST00000403408 ARHGDIBP52566 201 aa9.23□□□□□ -0.93
SPTLC1P3-201ENST00000403408 PRRX1P54821 245 aa9.23□□□□□ -0.93
SPTLC1P3-201ENST00000403408 GNB1P62873 340 aa9.23□□□□□ -0.93
SPTLC1P3-201ENST00000403408 HES1Q14469 280 aa9.23□□□□□ -0.93
SPTLC1P3-201ENST00000403408 KPNB1Q14974 876 aaKnown RBP9.23□□□□□ -0.93
SPTLC1P3-201ENST00000403408 BCL2L15Q5TBC7 163 aa9.23□□□□□ -0.93
SPTLC1P3-201ENST00000403408 CCDC144NLQ6NUI1 221 aa9.23□□□□□ -0.93
SPTLC1P3-201ENST00000403408 C4orf3Q8WVX3 66 aa9.23□□□□□ -0.93
SPTLC1P3-201ENST00000403408 RPEQ96AT9 228 aa9.23□□□□□ -0.93
SPTLC1P3-201ENST00000403408 CMTM5Q96DZ9 223 aa9.23□□□□□ -0.93
SPTLC1P3-201ENST00000403408 ABCG5Q9H222 651 aa9.23□□□□□ -0.93
SPTLC1P3-201ENST00000403408 CCDC134Q9H6E4 229 aa9.23□□□□□ -0.93
SPTLC1P3-201ENST00000403408 HMG20AQ9NP66 347 aa9.23□□□□□ -0.93
SPTLC1P3-201ENST00000403408 PSG11Q9UQ72 335 aa9.23□□□□□ -0.93
SPTLC1P3-201ENST00000403408 A0A1W2PPE3 182 aa9.22□□□□□ -0.93
SPTLC1P3-201ENST00000403408 I3L521 148 aa9.22□□□□□ -0.93
SPTLC1P3-201ENST00000403408 M0R129 80 aa9.22□□□□□ -0.93
SPTLC1P3-201ENST00000403408 AP4M1O00189 453 aa9.22□□□□□ -0.93
SPTLC1P3-201ENST00000403408 IGHG4P01861 327 aa9.22□□□□□ -0.93
SPTLC1P3-201ENST00000403408 ELANEP08246 267 aa9.22□□□□□ -0.93
SPTLC1P3-201ENST00000403408 PSMB8P28062 276 aa9.22□□□□□ -0.93
SPTLC1P3-201ENST00000403408 PRDX6P30041 224 aa9.22□□□□□ -0.93
SPTLC1P3-201ENST00000403408 PTGFRP43088 359 aa9.22□□□□□ -0.93
SPTLC1P3-201ENST00000403408 FUT6P51993 359 aa9.22□□□□□ -0.93
SPTLC1P3-201ENST00000403408 CXCR4P61073 352 aa9.22□□□□□ -0.93
SPTLC1P3-201ENST00000403408 CBX1P83916 185 aa9.22□□□□□ -0.93
SPTLC1P3-201ENST00000403408 CXorf66Q5JRM2 361 aaPredicted RBP9.22□□□□□ -0.93
SPTLC1P3-201ENST00000403408 ZNF322Q6U7Q0 402 aaPredicted RBP9.22□□□□□ -0.93
SPTLC1P3-201ENST00000403408 FOXRED2Q8IWF2 684 aa9.22□□□□□ -0.93
SPTLC1P3-201ENST00000403408 PGAM4Q8N0Y7 254 aa9.22□□□□□ -0.93
SPTLC1P3-201ENST00000403408 Q8N1Y9 231 aa9.22□□□□□ -0.93
SPTLC1P3-201ENST00000403408 OR13A1Q8NGR1 328 aa9.22□□□□□ -0.93
SPTLC1P3-201ENST00000403408 OR9G1Q8NH87 305 aa9.22□□□□□ -0.93
SPTLC1P3-201ENST00000403408 DCUN1D4Q92564 292 aa9.22□□□□□ -0.93
SPTLC1P3-201ENST00000403408 CREB3L1Q96BA8 519 aa9.22□□□□□ -0.93
SPTLC1P3-201ENST00000403408 RNFT2Q96EX2 444 aa9.22□□□□□ -0.93
SPTLC1P3-201ENST00000403408 EAF1Q96JC9 268 aaPredicted RBP9.22□□□□□ -0.93
SPTLC1P3-201ENST00000403408 CHST5Q9GZS9 411 aa9.22□□□□□ -0.93
SPTLC1P3-201ENST00000403408 ZMAT4Q9H898 229 aa9.22□□□□□ -0.93
SPTLC1P3-201ENST00000403408 REEP1Q9H902 201 aa9.22□□□□□ -0.93
SPTLC1P3-201ENST00000403408 GSTK1Q9Y2Q3 226 aa9.22□□□□□ -0.93
SPTLC1P3-201ENST00000403408 KBTBD11-OT1A0A1B0GTJ5 212 aa9.21□□□□□ -0.94
SPTLC1P3-201ENST00000403408 ZNF736B4DX44 427 aaPredicted RBP9.21□□□□□ -0.94
SPTLC1P3-201ENST00000403408 SLC33A1O00400 549 aaPredicted RBP9.21□□□□□ -0.94
SPTLC1P3-201ENST00000403408 E2F6O75461 281 aa9.21□□□□□ -0.94
SPTLC1P3-201ENST00000403408 GP9P14770 177 aa9.21□□□□□ -0.94
SPTLC1P3-201ENST00000403408 REG1BP48304 166 aa9.21□□□□□ -0.94
SPTLC1P3-201ENST00000403408 POU3F4P49335 361 aa9.21□□□□□ -0.94
SPTLC1P3-201ENST00000403408 VEGFCP49767 419 aa9.21□□□□□ -0.94
SPTLC1P3-201ENST00000403408 MS4A2Q01362 244 aa9.21□□□□□ -0.94
SPTLC1P3-201ENST00000403408 ATXN7L3Q14CW9 347 aaPredicted RBP9.21□□□□□ -0.94
SPTLC1P3-201ENST00000403408 HDXQ7Z353 690 aa9.21□□□□□ -0.94
SPTLC1P3-201ENST00000403408 CATSPERDQ86XM0 798 aa9.21□□□□□ -0.94
SPTLC1P3-201ENST00000403408 TGIF2LXQ8IUE1 241 aa9.21□□□□□ -0.94
SPTLC1P3-201ENST00000403408 ENTHD1Q8IYW4 607 aa9.21□□□□□ -0.94
SPTLC1P3-201ENST00000403408 RDH10Q8IZV5 341 aa9.21□□□□□ -0.94
SPTLC1P3-201ENST00000403408 OR4D6Q8NGJ1 314 aa9.21□□□□□ -0.94
SPTLC1P3-201ENST00000403408 GIPC3Q8TF64 312 aa9.21□□□□□ -0.94
SPTLC1P3-201ENST00000403408 ASB17Q8WXJ9 295 aa9.21□□□□□ -0.94
SPTLC1P3-201ENST00000403408 RFT1Q96AA3 541 aa9.21□□□□□ -0.94
SPTLC1P3-201ENST00000403408 ADAT3Q96EY9 351 aaPredicted RBP9.21□□□□□ -0.94
SPTLC1P3-201ENST00000403408 OR5B12Q96R08 314 aa9.21□□□□□ -0.94
SPTLC1P3-201ENST00000403408 COMMD4Q9H0A8 199 aa9.21□□□□□ -0.94
SPTLC1P3-201ENST00000403408 MOB1AQ9H8S9 216 aa9.21□□□□□ -0.94
SPTLC1P3-201ENST00000403408 ADGRL4Q9HBW9 690 aa9.21□□□□□ -0.94
SPTLC1P3-201ENST00000403408 ISYNA1Q9NPH2 558 aa9.21□□□□□ -0.94
SPTLC1P3-201ENST00000403408 ACTR3BQ9P1U1 418 aa9.21□□□□□ -0.94
SPTLC1P3-201ENST00000403408 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP9.21□□□□□ -0.94
SPTLC1P3-201ENST00000403408 SNX5Q9Y5X3 404 aa9.21□□□□□ -0.94
SPTLC1P3-201ENST00000403408 TRAV39A0A0B4J263 110 aa9.2□□□□□ -0.94
SPTLC1P3-201ENST00000403408 ZNF729A6NN14 1252 aaPredicted RBP9.2□□□□□ -0.94
SPTLC1P3-201ENST00000403408 RPP14O95059 124 aaKnown RBP9.2□□□□□ -0.94
SPTLC1P3-201ENST00000403408 HMGN1P05114 100 aa9.2□□□□□ -0.94
SPTLC1P3-201ENST00000403408 OSMP13725 252 aa9.2□□□□□ -0.94
SPTLC1P3-201ENST00000403408 PRKACGP22612 351 aa9.2□□□□□ -0.94
SPTLC1P3-201ENST00000403408 GNG10P50151 68 aa9.2□□□□□ -0.94
SPTLC1P3-201ENST00000403408 INSL3P51460 131 aa9.2□□□□□ -0.94
SPTLC1P3-201ENST00000403408 CDC42P60953 191 aa9.2□□□□□ -0.94
SPTLC1P3-201ENST00000403408 PDZK1IP1Q13113 114 aa9.2□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 50.1 ms