RNA–Protein interactions for RNA: ENST00000400018.7

SKA3-203, Transcript of spindle and kinetochore associated complex subunit 3, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene SKA3, Length 2,745 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKA3-203ENST00000400018 FLI1Q01543 452 aaPredicted RBP9.88□□□□□ -0.83
SKA3-203ENST00000400018 LHFPL2Q6ZUX7 228 aa9.88□□□□□ -0.83
SKA3-203ENST00000400018 AQP3Q92482 292 aa9.88□□□□□ -0.83
SKA3-203ENST00000400018 ST6GALNAC5Q9BVH7 336 aa9.88□□□□□ -0.83
SKA3-203ENST00000400018 COA4Q9NYJ1 87 aa9.88□□□□□ -0.83
SKA3-203ENST00000400018 MPC2O95563 127 aa9.87□□□□□ -0.83
SKA3-203ENST00000400018 HPXP02790 462 aa9.87□□□□□ -0.83
SKA3-203ENST00000400018 LOXP28300 417 aaPredicted RBP9.87□□□□□ -0.83
SKA3-203ENST00000400018 CD80P33681 288 aa9.87□□□□□ -0.83
SKA3-203ENST00000400018 SERPINF1P36955 418 aa9.87□□□□□ -0.83
SKA3-203ENST00000400018 GDNFP39905 211 aa9.87□□□□□ -0.83
SKA3-203ENST00000400018 RAB14P61106 215 aa9.87□□□□□ -0.83
SKA3-203ENST00000400018 GNG3P63215 75 aa9.87□□□□□ -0.83
SKA3-203ENST00000400018 PRB3Q04118 309 aaPredicted RBP9.87□□□□□ -0.83
SKA3-203ENST00000400018 MST1LQ2TV78 715 aa9.87□□□□□ -0.83
SKA3-203ENST00000400018 OR11H4Q8NGC9 324 aa9.87□□□□□ -0.83
SKA3-203ENST00000400018 CCL17Q92583 94 aa9.87□□□□□ -0.83
SKA3-203ENST00000400018 EMG1Q92979 244 aaKnown RBP9.87□□□□□ -0.83
SKA3-203ENST00000400018 SPSB1Q96BD6 273 aa9.87□□□□□ -0.83
SKA3-203ENST00000400018 METTL9Q9H1A3 318 aa9.87□□□□□ -0.83
SKA3-203ENST00000400018 ABCG5Q9H222 651 aa9.87□□□□□ -0.83
SKA3-203ENST00000400018 UBTD1Q9HAC8 227 aa9.87□□□□□ -0.83
SKA3-203ENST00000400018 UBQLN2Q9UHD9 624 aa9.87□□□□□ -0.83
SKA3-203ENST00000400018 BPNT1O95861 308 aa9.87□□□□□ -0.83
SKA3-203ENST00000400018 ALDOBP05062 364 aa9.87□□□□□ -0.83
SKA3-203ENST00000400018 IKZF1Q13422 519 aa9.87□□□□□ -0.83
SKA3-203ENST00000400018 MBNL2Q5VZF2 373 aaKnown RBP9.87□□□□□ -0.83
SKA3-203ENST00000400018 ATRAIDQ6UW56 229 aa9.87□□□□□ -0.83
SKA3-203ENST00000400018 STPG2Q8N412 459 aa9.87□□□□□ -0.83
SKA3-203ENST00000400018 OR5A2Q8NGI9 324 aa9.87□□□□□ -0.83
SKA3-203ENST00000400018 CCDC107Q8WV48 283 aa9.87□□□□□ -0.83
SKA3-203ENST00000400018 UPRTQ96BW1 309 aa9.87□□□□□ -0.83
SKA3-203ENST00000400018 TMPRSS13Q9BYE2 586 aa9.87□□□□□ -0.83
SKA3-203ENST00000400018 NKIRAS2Q9NYR9 191 aa9.87□□□□□ -0.83
SKA3-203ENST00000400018 RNF115Q9Y4L5 304 aa9.87□□□□□ -0.83
SKA3-203ENST00000400018 TEX46H3BTG2 121 aa9.86□□□□□ -0.83
SKA3-203ENST00000400018 SDCBPO00560 298 aaPredicted RBP9.86□□□□□ -0.83
SKA3-203ENST00000400018 XRCC3O43542 346 aa9.86□□□□□ -0.83
SKA3-203ENST00000400018 CLDN1O95832 211 aa9.86□□□□□ -0.83
SKA3-203ENST00000400018 IGHV3-13P01766 116 aa9.86□□□□□ -0.83
SKA3-203ENST00000400018 MEOX2P50222 304 aa9.86□□□□□ -0.83
SKA3-203ENST00000400018 ERVFRD-1P60508 538 aa9.86□□□□□ -0.83
SKA3-203ENST00000400018 RPS27AP62979 156 aaKnown RBP9.86□□□□□ -0.83
SKA3-203ENST00000400018 WDR82Q6UXN9 313 aa9.86□□□□□ -0.83
SKA3-203ENST00000400018 MEX3BQ6ZN04 569 aaKnown RBP9.86□□□□□ -0.83
SKA3-203ENST00000400018 OSR2Q8N2R0 312 aa9.86□□□□□ -0.83
SKA3-203ENST00000400018 PRR18Q8N4B5 295 aa9.86□□□□□ -0.83
SKA3-203ENST00000400018 FTMTQ8N4E7 242 aa9.86□□□□□ -0.83
SKA3-203ENST00000400018 OR10R2Q8NGX6 335 aa9.86□□□□□ -0.83
SKA3-203ENST00000400018 LRRC29Q8WV35 223 aa9.86□□□□□ -0.83
SKA3-203ENST00000400018 RAB3CQ96E17 227 aa9.86□□□□□ -0.83
SKA3-203ENST00000400018 DCTN5Q9BTE1 182 aa9.86□□□□□ -0.83
SKA3-203ENST00000400018 ZNF701Q9NV72 531 aaPredicted RBP9.86□□□□□ -0.83
SKA3-203ENST00000400018 FLVCR2Q9UPI3 526 aa9.86□□□□□ -0.83
SKA3-203ENST00000400018 TRAPPC2LH3BP13 241 aa9.86□□□□□ -0.83
SKA3-203ENST00000400018 NXPH2O95156 264 aa9.86□□□□□ -0.83
SKA3-203ENST00000400018 IFNA7P01567 189 aa9.86□□□□□ -0.83
SKA3-203ENST00000400018 CD37P11049 281 aa9.86□□□□□ -0.83
SKA3-203ENST00000400018 GTF2F2P13984 249 aa9.86□□□□□ -0.83
SKA3-203ENST00000400018 KITLGP21583 273 aa9.86□□□□□ -0.83
SKA3-203ENST00000400018 TNFAIP6P98066 277 aaPredicted RBP9.86□□□□□ -0.83
SKA3-203ENST00000400018 ATXN7L3Q14CW9 347 aaPredicted RBP9.86□□□□□ -0.83
SKA3-203ENST00000400018 METTL11BQ5VVY1 283 aa9.86□□□□□ -0.83
SKA3-203ENST00000400018 TRIQKQ629K1 86 aa9.86□□□□□ -0.83
SKA3-203ENST00000400018 C20orf204Q6ZNR8 217 aa9.86□□□□□ -0.83
SKA3-203ENST00000400018 CLRN3Q8NCR9 226 aa9.86□□□□□ -0.83
SKA3-203ENST00000400018 OR13G1Q8NGZ3 307 aa9.86□□□□□ -0.83
SKA3-203ENST00000400018 FOXRED1Q96CU9 486 aaPredicted RBP9.86□□□□□ -0.83
SKA3-203ENST00000400018 RTL8AQ9BWD3 113 aa9.86□□□□□ -0.83
SKA3-203ENST00000400018 CLEC4MQ9H2X3 399 aaPredicted RBP9.86□□□□□ -0.83
SKA3-203ENST00000400018 PLEKHJ1Q9NW61 149 aa9.86□□□□□ -0.83
SKA3-203ENST00000400018 SDHAF2Q9NX18 166 aa9.86□□□□□ -0.83
SKA3-203ENST00000400018 COPZ2Q9P299 210 aa9.86□□□□□ -0.83
SKA3-203ENST00000400018 ZNF391Q9UJN7 358 aa9.86□□□□□ -0.83
SKA3-203ENST00000400018 RAB22AQ9UL26 194 aa9.86□□□□□ -0.83
SKA3-203ENST00000400018 ANKRD17O75179 2603 aaKnown RBP9.85□□□□□ -0.83
SKA3-203ENST00000400018 DHRS7CA6NNS2 312 aa9.85□□□□□ -0.83
SKA3-203ENST00000400018 IGHV3-7P01780 117 aa9.85□□□□□ -0.83
SKA3-203ENST00000400018 CD3DP04234 171 aa9.85□□□□□ -0.83
SKA3-203ENST00000400018 ZNF44P15621 663 aa9.85□□□□□ -0.83
SKA3-203ENST00000400018 ARFRP1Q13795 201 aa9.85□□□□□ -0.83
SKA3-203ENST00000400018 PCGF3Q3KNV8 242 aa9.85□□□□□ -0.83
SKA3-203ENST00000400018 ZNF260Q3ZCT1 412 aa9.85□□□□□ -0.83
SKA3-203ENST00000400018 FBXL19-AS1Q494R0 122 aa9.85□□□□□ -0.83
SKA3-203ENST00000400018 TRAPPC6BQ86SZ2 158 aa9.85□□□□□ -0.83
SKA3-203ENST00000400018 MUC15Q8N387 334 aa9.85□□□□□ -0.83
SKA3-203ENST00000400018 OR4K15Q8NH41 348 aa9.85□□□□□ -0.83
SKA3-203ENST00000400018 OR56B4Q8NH76 319 aa9.85□□□□□ -0.83
SKA3-203ENST00000400018 KCNG3Q8TAE7 436 aa9.85□□□□□ -0.83
SKA3-203ENST00000400018 NEK7Q8TDX7 302 aa9.85□□□□□ -0.83
SKA3-203ENST00000400018 Q96M66 194 aa9.85□□□□□ -0.83
SKA3-203ENST00000400018 DNAJB11Q9UBS4 358 aa9.85□□□□□ -0.83
SKA3-203ENST00000400018 EDARQ9UNE0 448 aa9.85□□□□□ -0.83
SKA3-203ENST00000400018 MPC1Q9Y5U8 109 aa9.85□□□□□ -0.83
SKA3-203ENST00000400018 YLPM1P49750 1951 aaKnown RBP9.85□□□□□ -0.83
SKA3-203ENST00000400018 IGLV3-9A0A075B6K5 115 aa9.85□□□□□ -0.83
SKA3-203ENST00000400018 RFPL4AA6NLU0 287 aa9.85□□□□□ -0.83
SKA3-203ENST00000400018 RFPL4AL1F8VTS6 287 aa9.85□□□□□ -0.83
SKA3-203ENST00000400018 MNDAP41218 407 aa9.85□□□□□ -0.83
SKA3-203ENST00000400018 ZNRF1Q8ND25 227 aa9.85□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 50.5 ms