RNA–Protein interactions for RNA: ENST00000399638.5

CACNA1C-216, Transcript of calcium voltage-gated channel subunit alpha1 C, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CACNA1C, Length 6,595 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1C-216ENST00000399638 CYB5R1Q9UHQ9 305 aa9.74□□□□□ -0.85
CACNA1C-216ENST00000399638 CSAG2Q9Y5P2 127 aa9.74□□□□□ -0.85
CACNA1C-216ENST00000399638 ICE1Q9Y2F5 2266 aa9.74□□□□□ -0.85
CACNA1C-216ENST00000399638 FITM1A5D6W6 292 aa9.73□□□□□ -0.85
CACNA1C-216ENST00000399638 ATF1P18846 271 aa9.73□□□□□ -0.85
CACNA1C-216ENST00000399638 MMP11P24347 488 aa9.73□□□□□ -0.85
CACNA1C-216ENST00000399638 CLDN20P56880 219 aa9.73□□□□□ -0.85
CACNA1C-216ENST00000399638 IGFBP7Q16270 282 aa9.73□□□□□ -0.85
CACNA1C-216ENST00000399638 EMC4Q5J8M3 183 aa9.73□□□□□ -0.85
CACNA1C-216ENST00000399638 DNLZQ5SXM8 178 aa9.73□□□□□ -0.85
CACNA1C-216ENST00000399638 OR52M1Q8NGK5 317 aa9.73□□□□□ -0.85
CACNA1C-216ENST00000399638 ASCL3Q9NQ33 180 aa9.73□□□□□ -0.85
CACNA1C-216ENST00000399638 BOLA1Q9Y3E2 137 aa9.73□□□□□ -0.85
CACNA1C-216ENST00000399638 CLEC18AA5D8T8 446 aa9.73□□□□□ -0.85
CACNA1C-216ENST00000399638 TCL1AP56279 114 aa9.73□□□□□ -0.85
CACNA1C-216ENST00000399638 RPS25P62851 125 aaKnown RBP9.73□□□□□ -0.85
CACNA1C-216ENST00000399638 TM4SF20Q53R12 229 aa9.73□□□□□ -0.85
CACNA1C-216ENST00000399638 TRAT1Q6PIZ9 186 aa9.73□□□□□ -0.85
CACNA1C-216ENST00000399638 C3orf56Q8N813 242 aa9.73□□□□□ -0.85
CACNA1C-216ENST00000399638 CLEC18CQ8NCF0 446 aa9.73□□□□□ -0.85
CACNA1C-216ENST00000399638 LINC01560Q8TB33 94 aa9.73□□□□□ -0.85
CACNA1C-216ENST00000399638 GPR61Q9BZJ8 451 aa9.73□□□□□ -0.85
CACNA1C-216ENST00000399638 CA10Q9NS85 328 aa9.73□□□□□ -0.85
CACNA1C-216ENST00000399638 CACFD1Q9UGQ2 172 aa9.73□□□□□ -0.85
CACNA1C-216ENST00000399638 KRASP01116 189 aa9.73□□□□□ -0.85
CACNA1C-216ENST00000399638 SP1P08047 785 aa9.73□□□□□ -0.85
CACNA1C-216ENST00000399638 DGAT2L6Q6ZPD8 337 aa9.73□□□□□ -0.85
CACNA1C-216ENST00000399638 Q8WTZ3 238 aa9.73□□□□□ -0.85
CACNA1C-216ENST00000399638 SEC22CQ9BRL7 303 aa9.73□□□□□ -0.85
CACNA1C-216ENST00000399638 RAG2P55895 527 aa9.73□□□□□ -0.85
CACNA1C-216ENST00000399638 SMAGPQ0VAQ4 97 aa9.73□□□□□ -0.85
CACNA1C-216ENST00000399638 HERPUD1Q15011 391 aa9.73□□□□□ -0.85
CACNA1C-216ENST00000399638 C12orf54Q6X4T0 127 aa9.73□□□□□ -0.85
CACNA1C-216ENST00000399638 ZNF620Q6ZNG0 422 aa9.73□□□□□ -0.85
CACNA1C-216ENST00000399638 KLHDC1Q8N7A1 406 aa9.73□□□□□ -0.85
CACNA1C-216ENST00000399638 C5orf17Q8NAS9 161 aa9.73□□□□□ -0.85
CACNA1C-216ENST00000399638 PITPNC1Q9UKF7 332 aa9.73□□□□□ -0.85
CACNA1C-216ENST00000399638 AKR7A2O43488 359 aa9.73□□□□□ -0.85
CACNA1C-216ENST00000399638 RAF1P04049 648 aa9.73□□□□□ -0.85
CACNA1C-216ENST00000399638 HIST1H1CP16403 213 aaKnown RBP9.73□□□□□ -0.85
CACNA1C-216ENST00000399638 SRMP19623 302 aa9.73□□□□□ -0.85
CACNA1C-216ENST00000399638 MRGPREQ86SM8 312 aa9.73□□□□□ -0.85
CACNA1C-216ENST00000399638 TMEM37Q8WXS4 190 aa9.73□□□□□ -0.85
CACNA1C-216ENST00000399638 TMEM38AQ9H6F2 299 aa9.73□□□□□ -0.85
CACNA1C-216ENST00000399638 ZNF629Q9UEG4 869 aaPredicted RBP9.73□□□□□ -0.85
CACNA1C-216ENST00000399638 LSM2Q9Y333 95 aaKnown RBP9.73□□□□□ -0.85
CACNA1C-216ENST00000399638 TRAV8-7A0A075B6U6 113 aa9.72□□□□□ -0.85
CACNA1C-216ENST00000399638 PPIAL4EA0A075B759 164 aa9.72□□□□□ -0.85
CACNA1C-216ENST00000399638 PPIAL4DF5H284 164 aa9.72□□□□□ -0.85
CACNA1C-216ENST00000399638 H3BP45 60 aa9.72□□□□□ -0.85
CACNA1C-216ENST00000399638 PPIAL4FP0DN26 164 aa9.72□□□□□ -0.85
CACNA1C-216ENST00000399638 TEAD1P28347 426 aa9.72□□□□□ -0.85
CACNA1C-216ENST00000399638 DOLPP1Q86YN1 238 aa9.72□□□□□ -0.85
CACNA1C-216ENST00000399638 C10orf126Q8N4M7 172 aa9.72□□□□□ -0.85
CACNA1C-216ENST00000399638 OIT3Q8WWZ8 545 aa9.72□□□□□ -0.85
CACNA1C-216ENST00000399638 SLC7A10Q9NS82 523 aa9.72□□□□□ -0.85
CACNA1C-216ENST00000399638 SLC25A10Q9UBX3 287 aaPredicted RBP9.72□□□□□ -0.85
CACNA1C-216ENST00000399638 NAT8BQ9UHF3 227 aa9.72□□□□□ -0.85
CACNA1C-216ENST00000399638 PPIAL4AQ9Y536 164 aa9.72□□□□□ -0.85
CACNA1C-216ENST00000399638 TMPRSS11DO60235 418 aa9.72□□□□□ -0.85
CACNA1C-216ENST00000399638 PCOLCEQ15113 449 aa9.72□□□□□ -0.85
CACNA1C-216ENST00000399638 PAQR6Q6TCH4 344 aa9.72□□□□□ -0.85
CACNA1C-216ENST00000399638 UBQLN3Q9H347 655 aa9.72□□□□□ -0.85
CACNA1C-216ENST00000399638 SERGEFQ9UGK8 458 aa9.72□□□□□ -0.85
CACNA1C-216ENST00000399638 METRNQ9UJH8 293 aa9.72□□□□□ -0.85
CACNA1C-216ENST00000399638 TAPBPO15533 448 aa9.72□□□□□ -0.85
CACNA1C-216ENST00000399638 PATE4P0C8F1 98 aa9.72□□□□□ -0.85
CACNA1C-216ENST00000399638 HTR1FP30939 366 aa9.72□□□□□ -0.85
CACNA1C-216ENST00000399638 ZNF137PP52743 207 aa9.72□□□□□ -0.85
CACNA1C-216ENST00000399638 HMGN3Q15651 99 aa9.72□□□□□ -0.85
CACNA1C-216ENST00000399638 PMS2CLQ68D20 193 aa9.72□□□□□ -0.85
CACNA1C-216ENST00000399638 LAX1Q8IWV1 398 aa9.72□□□□□ -0.85
CACNA1C-216ENST00000399638 OR4B1Q8NGF8 309 aa9.72□□□□□ -0.85
CACNA1C-216ENST00000399638 SNRPCP09234 159 aaKnown RBP9.72□□□□□ -0.85
CACNA1C-216ENST00000399638 ZNF32P17041 273 aa9.72□□□□□ -0.85
CACNA1C-216ENST00000399638 PI3P19957 117 aa9.72□□□□□ -0.85
CACNA1C-216ENST00000399638 NKG7Q16617 165 aa9.72□□□□□ -0.85
CACNA1C-216ENST00000399638 RBM45Q8IUH3 476 aaKnown RBP9.72□□□□□ -0.85
CACNA1C-216ENST00000399638 OR52N1Q8NH53 320 aa9.72□□□□□ -0.85
CACNA1C-216ENST00000399638 OR2A5Q96R48 311 aa9.72□□□□□ -0.85
CACNA1C-216ENST00000399638 SCN4AP35499 1836 aa9.72□□□□□ -0.85
CACNA1C-216ENST00000399638 NAT1P18440 290 aa9.72□□□□□ -0.85
CACNA1C-216ENST00000399638 SKP2Q13309 424 aa9.72□□□□□ -0.85
CACNA1C-216ENST00000399638 NCR3LG1Q68D85 454 aa9.72□□□□□ -0.85
CACNA1C-216ENST00000399638 C6orf201Q7Z4U5 140 aa9.72□□□□□ -0.85
CACNA1C-216ENST00000399638 NKAIN4Q8IVV8 208 aa9.72□□□□□ -0.85
CACNA1C-216ENST00000399638 BTF3P20290 206 aaKnown RBP9.72□□□□□ -0.85
CACNA1C-216ENST00000399638 PMS2P11Q13670 270 aa9.72□□□□□ -0.85
CACNA1C-216ENST00000399638 DUSP18Q8NEJ0 188 aa9.72□□□□□ -0.85
CACNA1C-216ENST00000399638 OR8G5Q8NG78 346 aa9.72□□□□□ -0.85
CACNA1C-216ENST00000399638 SCARB1Q8WTV0 552 aa9.72□□□□□ -0.85
CACNA1C-216ENST00000399638 SMIM7Q9BQ49 75 aa9.72□□□□□ -0.85
CACNA1C-216ENST00000399638 SCNM1Q9BWG6 230 aa9.72□□□□□ -0.85
CACNA1C-216ENST00000399638 ETV7Q9Y603 341 aa9.72□□□□□ -0.85
CACNA1C-216ENST00000399638 R4GMQ9 66 aa9.72□□□□□ -0.85
CACNA1C-216ENST00000399638 OR2T8A6NH00 312 aa9.71□□□□□ -0.85
CACNA1C-216ENST00000399638 GALP22466 123 aa9.71□□□□□ -0.85
CACNA1C-216ENST00000399638 ERVS71-1P61550 626 aa9.71□□□□□ -0.85
CACNA1C-216ENST00000399638 CCL8P80075 99 aa9.71□□□□□ -0.85
CACNA1C-216ENST00000399638 HIKESHIQ53FT3 197 aa9.71□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 40 ms