RNA–Protein interactions for RNA: ENST00000398868.7

ATL3-201, Transcript of atlastin GTPase 3, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene ATL3, Length 7,135 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATL3-201ENST00000398868 SRSF9Q13242 221 aaKnown RBP eCLIP8.28□□□□□ -1.08
ATL3-201ENST00000398868 COL5A1-AS1Q5SY13 56 aa8.28□□□□□ -1.08
ATL3-201ENST00000398868 ZNF841Q6ZN19 808 aa8.28□□□□□ -1.08
ATL3-201ENST00000398868 DYNLRB2Q8TF09 96 aa8.28□□□□□ -1.08
ATL3-201ENST00000398868 ADAT3Q96EY9 351 aaPredicted RBP8.28□□□□□ -1.08
ATL3-201ENST00000398868 TBX15Q96SF7 602 aa8.28□□□□□ -1.08
ATL3-201ENST00000398868 CDCA4Q9BXL8 241 aa8.28□□□□□ -1.08
ATL3-201ENST00000398868 ZBTB25P24278 435 aa8.28□□□□□ -1.08
ATL3-201ENST00000398868 GUCA2BQ16661 112 aa8.28□□□□□ -1.08
ATL3-201ENST00000398868 C1QL3Q5VWW1 255 aa8.28□□□□□ -1.08
ATL3-201ENST00000398868 FCRL6Q6DN72 434 aa8.28□□□□□ -1.08
ATL3-201ENST00000398868 TPRX1Q8N7U7 411 aa8.28□□□□□ -1.08
ATL3-201ENST00000398868 UBTD2Q8WUN7 234 aa8.28□□□□□ -1.08
ATL3-201ENST00000398868 BCL2L2Q92843 193 aaPredicted RBP8.28□□□□□ -1.08
ATL3-201ENST00000398868 CLDN23Q96B33 292 aa8.28□□□□□ -1.08
ATL3-201ENST00000398868 MRGPRX4Q96LA9 322 aa8.28□□□□□ -1.08
ATL3-201ENST00000398868 S1PR5Q9H228 398 aa8.28□□□□□ -1.08
ATL3-201ENST00000398868 AHDC1Q5TGY3 1603 aaPredicted RBP8.28□□□□□ -1.08
ATL3-201ENST00000398868 LAMB1P07942 1786 aa8.28□□□□□ -1.08
ATL3-201ENST00000398868 A0A1W2PRX2 142 aa8.28□□□□□ -1.08
ATL3-201ENST00000398868 NGFP01138 241 aa8.28□□□□□ -1.08
ATL3-201ENST00000398868 HPXP02790 462 aa8.28□□□□□ -1.08
ATL3-201ENST00000398868 PRF1P14222 555 aa8.28□□□□□ -1.08
ATL3-201ENST00000398868 BPIFB3P59826 476 aa8.28□□□□□ -1.08
ATL3-201ENST00000398868 FOXO1Q12778 655 aa8.28□□□□□ -1.08
ATL3-201ENST00000398868 ZNF385CQ66K41 422 aaPredicted RBP8.28□□□□□ -1.08
ATL3-201ENST00000398868 C5orf46Q6UWT4 87 aa8.28□□□□□ -1.08
ATL3-201ENST00000398868 ERASQ7Z444 233 aa8.28□□□□□ -1.08
ATL3-201ENST00000398868 MAP1LC3CQ9BXW4 147 aa8.28□□□□□ -1.08
ATL3-201ENST00000398868 TMEM272A0A1B0GTI8 110 aa8.28□□□□□ -1.08
ATL3-201ENST00000398868 C9orf170A2RU37 121 aa8.28□□□□□ -1.08
ATL3-201ENST00000398868 B4DEV8 164 aa8.28□□□□□ -1.08
ATL3-201ENST00000398868 SPINT1O43278 529 aa8.28□□□□□ -1.08
ATL3-201ENST00000398868 CCL3P10147 92 aa8.28□□□□□ -1.08
ATL3-201ENST00000398868 MVDP53602 400 aa8.28□□□□□ -1.08
ATL3-201ENST00000398868 HLA-DRB5Q30154 266 aa8.28□□□□□ -1.08
ATL3-201ENST00000398868 TSPO2Q5TGU0 170 aa8.28□□□□□ -1.08
ATL3-201ENST00000398868 FAM131CQ96AQ9 280 aa8.28□□□□□ -1.08
ATL3-201ENST00000398868 GABARAPL3Q9BY60 117 aa8.28□□□□□ -1.08
ATL3-201ENST00000398868 MRPL13Q9BYD1 178 aaKnown RBP8.28□□□□□ -1.08
ATL3-201ENST00000398868 RAB33BQ9H082 229 aa8.28□□□□□ -1.08
ATL3-201ENST00000398868 SSC5DA1L4H1 1573 aa8.28□□□□□ -1.08
ATL3-201ENST00000398868 POLEQ07864 2286 aa8.28□□□□□ -1.08
ATL3-201ENST00000398868 MMP9P14780 707 aa8.28□□□□□ -1.08
ATL3-201ENST00000398868 PLP1P60201 277 aa8.28□□□□□ -1.08
ATL3-201ENST00000398868 FAM162BQ5T6X4 162 aa8.28□□□□□ -1.08
ATL3-201ENST00000398868 SLC36A1Q7Z2H8 476 aa8.28□□□□□ -1.08
ATL3-201ENST00000398868 PHYHIPQ92561 330 aa8.28□□□□□ -1.08
ATL3-201ENST00000398868 FLYWCH2Q96CP2 140 aaKnown RBP8.28□□□□□ -1.08
ATL3-201ENST00000398868 PARD6GQ9BYG4 376 aaPredicted RBP8.28□□□□□ -1.08
ATL3-201ENST00000398868 TDRD15B5MCY1 1934 aaKnown RBP8.28□□□□□ -1.08
ATL3-201ENST00000398868 HIST3H3Q16695 136 aa8.27□□□□□ -1.08
ATL3-201ENST00000398868 RSPO4Q2I0M5 234 aaPredicted RBP8.27□□□□□ -1.08
ATL3-201ENST00000398868 SH2D5Q6ZV89 423 aa8.27□□□□□ -1.08
ATL3-201ENST00000398868 TMEM116Q8NCL8 245 aa8.27□□□□□ -1.08
ATL3-201ENST00000398868 PERPQ96FX8 193 aa8.27□□□□□ -1.08
ATL3-201ENST00000398868 ERRFI1Q9UJM3 462 aaPredicted RBP8.27□□□□□ -1.08
ATL3-201ENST00000398868 PDCD11Q14690 1871 aaKnown RBP8.27□□□□□ -1.09
ATL3-201ENST00000398868 ZNF253O75346 499 aa8.27□□□□□ -1.09
ATL3-201ENST00000398868 EMP1P54849 157 aa8.27□□□□□ -1.09
ATL3-201ENST00000398868 TTC9Q92623 222 aa8.27□□□□□ -1.09
ATL3-201ENST00000398868 ATG101Q9BSB4 218 aa8.27□□□□□ -1.09
ATL3-201ENST00000398868 TINAGQ9UJW2 476 aa8.27□□□□□ -1.09
ATL3-201ENST00000398868 FER1L5A0AVI2 2057 aa8.27□□□□□ -1.09
ATL3-201ENST00000398868 SRCAPQ6ZRS2 3230 aa8.27□□□□□ -1.09
ATL3-201ENST00000398868 LRRC3CA6NJW4 275 aa8.27□□□□□ -1.09
ATL3-201ENST00000398868 FTH1P19P0C7X4 201 aa8.27□□□□□ -1.09
ATL3-201ENST00000398868 DRD3P35462 400 aa8.27□□□□□ -1.09
ATL3-201ENST00000398868 CDK5R1Q15078 307 aa8.27□□□□□ -1.09
ATL3-201ENST00000398868 ATP6V1FQ16864 119 aa8.27□□□□□ -1.09
ATL3-201ENST00000398868 CARFQ8N187 725 aa8.27□□□□□ -1.09
ATL3-201ENST00000398868 OR4D9Q8NGE8 314 aa8.27□□□□□ -1.09
ATL3-201ENST00000398868 SAP30LQ9HAJ7 183 aa8.27□□□□□ -1.09
ATL3-201ENST00000398868 FOXJ3Q9UPW0 622 aa8.27□□□□□ -1.09
ATL3-201ENST00000398868 R4GMQ9 66 aa8.27□□□□□ -1.09
ATL3-201ENST00000398868 ADRA2AP08913 450 aa8.27□□□□□ -1.09
ATL3-201ENST00000398868 LSM11P83369 360 aaKnown RBP eCLIP8.27□□□□□ -1.09
ATL3-201ENST00000398868 ADAMTS17Q8TE56 1095 aa8.27□□□□□ -1.09
ATL3-201ENST00000398868 CMC2Q9NRP2 79 aa8.27□□□□□ -1.09
ATL3-201ENST00000398868 IGKV3OR2-268A0A0C4DH90 116 aa8.27□□□□□ -1.09
ATL3-201ENST00000398868 SEMA7AO75326 666 aa8.27□□□□□ -1.09
ATL3-201ENST00000398868 ACTL6AO96019 429 aa8.27□□□□□ -1.09
ATL3-201ENST00000398868 IER3P46695 156 aa8.27□□□□□ -1.09
ATL3-201ENST00000398868 DHRS2Q13268 280 aa8.27□□□□□ -1.09
ATL3-201ENST00000398868 ELOBQ15370 118 aa8.27□□□□□ -1.09
ATL3-201ENST00000398868 RIMKLAQ8IXN7 391 aa8.27□□□□□ -1.09
ATL3-201ENST00000398868 TMEM229BQ8NBD8 167 aa8.27□□□□□ -1.09
ATL3-201ENST00000398868 OR5AU1Q8NGC0 362 aa8.27□□□□□ -1.09
ATL3-201ENST00000398868 C4orf45Q96LM5 186 aa8.27□□□□□ -1.09
ATL3-201ENST00000398868 UQCC1Q9NVA1 299 aa8.27□□□□□ -1.09
ATL3-201ENST00000398868 FBXL17Q9UF56 701 aa8.27□□□□□ -1.09
ATL3-201ENST00000398868 B9D1Q9UPM9 204 aa8.27□□□□□ -1.09
ATL3-201ENST00000398868 CABIN1Q9Y6J0 2220 aa8.27□□□□□ -1.09
ATL3-201ENST00000398868 ZFC3H1O60293 1989 aaKnown RBP8.27□□□□□ -1.09
ATL3-201ENST00000398868 LOC107984156A0A0G2JMH3 177 aa8.27□□□□□ -1.09
ATL3-201ENST00000398868 KIR2DS1A0A191URI9 304 aa8.27□□□□□ -1.09
ATL3-201ENST00000398868 RBFOX3A6NFN3 312 aa8.27□□□□□ -1.09
ATL3-201ENST00000398868 ADAP1O75689 374 aa8.27□□□□□ -1.09
ATL3-201ENST00000398868 KIR2DS4P43632 304 aa8.27□□□□□ -1.09
ATL3-201ENST00000398868 KIR2DS1Q14954 304 aa8.27□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 76 ms