RNA–Protein interactions for RNA: ENST00000398729.1

VCX3A-202, Transcript of variable charge X-linked 3A, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene VCX3A, Length 808 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCX3A-202ENST00000398729 EFNB2P52799 333 aa10.83□□□□□ -0.68
VCX3A-202ENST00000398729 AESQ08117 197 aa10.83□□□□□ -0.68
VCX3A-202ENST00000398729 IL18R1Q13478 541 aa10.83□□□□□ -0.68
VCX3A-202ENST00000398729 MED21Q13503 144 aa10.83□□□□□ -0.68
VCX3A-202ENST00000398729 CDK5R1Q15078 307 aa10.83□□□□□ -0.68
VCX3A-202ENST00000398729 LDLRAD2Q5SZI1 272 aa10.83□□□□□ -0.68
VCX3A-202ENST00000398729 OR52W1Q6IF63 320 aa10.83□□□□□ -0.68
VCX3A-202ENST00000398729 Q6P435 159 aa10.83□□□□□ -0.68
VCX3A-202ENST00000398729 SATL1Q86VE3 508 aa10.83□□□□□ -0.68
VCX3A-202ENST00000398729 PACRGLQ8N7B6 248 aa10.83□□□□□ -0.68
VCX3A-202ENST00000398729 SETD9Q8NE22 299 aa10.83□□□□□ -0.68
VCX3A-202ENST00000398729 PXT1Q8NFP0 134 aa10.83□□□□□ -0.68
VCX3A-202ENST00000398729 NDNFQ8TB73 568 aa10.83□□□□□ -0.68
VCX3A-202ENST00000398729 CORO2AQ92828 525 aa10.83□□□□□ -0.68
VCX3A-202ENST00000398729 GPER1Q99527 375 aa10.83□□□□□ -0.68
VCX3A-202ENST00000398729 NKX3-1Q99801 234 aaPredicted RBP10.83□□□□□ -0.68
VCX3A-202ENST00000398729 TAS2R3Q9NYW6 316 aa10.83□□□□□ -0.68
VCX3A-202ENST00000398729 PITPNC1Q9UKF7 332 aa10.83□□□□□ -0.68
VCX3A-202ENST00000398729 SIGLEC9Q9Y336 463 aa10.83□□□□□ -0.68
VCX3A-202ENST00000398729 NOTCH3Q9UM47 2321 aa10.83□□□□□ -0.68
VCX3A-202ENST00000398729 DNAH3Q8TD57 4116 aa10.82□□□□□ -0.68
VCX3A-202ENST00000398729 SLC33A1O00400 549 aaPredicted RBP10.82□□□□□ -0.68
VCX3A-202ENST00000398729 MMP23AO75900 390 aa10.82□□□□□ -0.68
VCX3A-202ENST00000398729 HTR1DP28221 377 aa10.82□□□□□ -0.68
VCX3A-202ENST00000398729 GLIPR1P48060 266 aa10.82□□□□□ -0.68
VCX3A-202ENST00000398729 DYNLT3P51808 116 aa10.82□□□□□ -0.68
VCX3A-202ENST00000398729 C2orf68Q2NKX9 166 aa10.82□□□□□ -0.68
VCX3A-202ENST00000398729 KRBOX4Q5JUW0 171 aa10.82□□□□□ -0.68
VCX3A-202ENST00000398729 OR2G6Q5TZ20 316 aa10.82□□□□□ -0.68
VCX3A-202ENST00000398729 XAF1Q6GPH4 301 aa10.82□□□□□ -0.68
VCX3A-202ENST00000398729 ELP2Q6IA86 826 aa10.82□□□□□ -0.68
VCX3A-202ENST00000398729 ZNF529Q6P280 563 aa10.82□□□□□ -0.68
VCX3A-202ENST00000398729 HEPN1Q6WQI6 88 aa10.82□□□□□ -0.68
VCX3A-202ENST00000398729 Q6ZTK2 550 aa10.82□□□□□ -0.68
VCX3A-202ENST00000398729 DHRSXQ8N5I4 330 aa10.82□□□□□ -0.68
VCX3A-202ENST00000398729 ZNF596Q8TC21 504 aa10.82□□□□□ -0.68
VCX3A-202ENST00000398729 TNFAIP8L1Q8WVP5 186 aa10.82□□□□□ -0.68
VCX3A-202ENST00000398729 RGP1Q92546 391 aaPredicted RBP10.82□□□□□ -0.68
VCX3A-202ENST00000398729 CHCHD3Q9NX63 227 aaKnown RBP10.82□□□□□ -0.68
VCX3A-202ENST00000398729 TAS2R4Q9NYW5 299 aa10.82□□□□□ -0.68
VCX3A-202ENST00000398729 DIMT1Q9UNQ2 313 aaKnown RBP10.82□□□□□ -0.68
VCX3A-202ENST00000398729 EXOSC1Q9Y3B2 195 aaKnown RBP10.82□□□□□ -0.68
VCX3A-202ENST00000398729 HILPDAQ9Y5L2 63 aa10.82□□□□□ -0.68
VCX3A-202ENST00000398729 ODAMA1E959 279 aa10.81□□□□□ -0.68
VCX3A-202ENST00000398729 A6NDX4 124 aa10.81□□□□□ -0.68
VCX3A-202ENST00000398729 GABRPO00591 440 aa10.81□□□□□ -0.68
VCX3A-202ENST00000398729 CDK2P24941 298 aa10.81□□□□□ -0.68
VCX3A-202ENST00000398729 PTGFRP43088 359 aa10.81□□□□□ -0.68
VCX3A-202ENST00000398729 PPP3R1P63098 170 aa10.81□□□□□ -0.68
VCX3A-202ENST00000398729 SLC34A1Q06495 639 aa10.81□□□□□ -0.68
VCX3A-202ENST00000398729 HERPUD1Q15011 391 aa10.81□□□□□ -0.68
VCX3A-202ENST00000398729 FBLN7Q53RD9 439 aa10.81□□□□□ -0.68
VCX3A-202ENST00000398729 PRAMEF5Q5TYX0 476 aa10.81□□□□□ -0.68
VCX3A-202ENST00000398729 CCBE1Q6UXH8 406 aaPredicted RBP10.81□□□□□ -0.68
VCX3A-202ENST00000398729 RTN4RL2Q86UN3 420 aa10.81□□□□□ -0.68
VCX3A-202ENST00000398729 C1QL4Q86Z23 238 aa10.81□□□□□ -0.68
VCX3A-202ENST00000398729 ABHD12Q8N2K0 398 aa10.81□□□□□ -0.68
VCX3A-202ENST00000398729 OR4D6Q8NGJ1 314 aa10.81□□□□□ -0.68
VCX3A-202ENST00000398729 OR51A2Q8NGJ7 313 aa10.81□□□□□ -0.68
VCX3A-202ENST00000398729 TMEM106AQ96A25 262 aa10.81□□□□□ -0.68
VCX3A-202ENST00000398729 SMIM19Q96E16 107 aa10.81□□□□□ -0.68
VCX3A-202ENST00000398729 COQ2Q96H96 371 aa10.81□□□□□ -0.68
VCX3A-202ENST00000398729 TMEM80Q96HE8 168 aa10.81□□□□□ -0.68
VCX3A-202ENST00000398729 NR1H4Q96RI1 486 aaPredicted RBP10.81□□□□□ -0.68
VCX3A-202ENST00000398729 FAM192AQ9GZU8 254 aa10.81□□□□□ -0.68
VCX3A-202ENST00000398729 TMEM138Q9NPI0 162 aa10.81□□□□□ -0.68
VCX3A-202ENST00000398729 BABAM2Q9NXR7 383 aa10.81□□□□□ -0.68
VCX3A-202ENST00000398729 ING3Q9NXR8 418 aa10.81□□□□□ -0.68
VCX3A-202ENST00000398729 OR6C3Q9NZP0 311 aa10.81□□□□□ -0.68
VCX3A-202ENST00000398729 TET2Q6N021 2002 aaPredicted RBP10.8□□□□□ -0.68
VCX3A-202ENST00000398729 H0YJX3 145 aa10.8□□□□□ -0.68
VCX3A-202ENST00000398729 H3BUI4 141 aa10.8□□□□□ -0.68
VCX3A-202ENST00000398729 F2RL2O00254 374 aa10.8□□□□□ -0.68
VCX3A-202ENST00000398729 OGG1O15527 345 aa10.8□□□□□ -0.68
VCX3A-202ENST00000398729 ALDOBP05062 364 aa10.8□□□□□ -0.68
VCX3A-202ENST00000398729 ADARB1P78563 741 aaKnown RBP10.8□□□□□ -0.68
VCX3A-202ENST00000398729 IL13RA2Q14627 380 aa10.8□□□□□ -0.68
VCX3A-202ENST00000398729 ATXN7L3Q14CW9 347 aaPredicted RBP10.8□□□□□ -0.68
VCX3A-202ENST00000398729 RCN1Q15293 331 aa10.8□□□□□ -0.68
VCX3A-202ENST00000398729 RSU1Q15404 277 aa10.8□□□□□ -0.68
VCX3A-202ENST00000398729 PAN3Q58A45 887 aaKnown RBP10.8□□□□□ -0.68
VCX3A-202ENST00000398729 TMEM219Q86XT9 240 aa10.8□□□□□ -0.68
VCX3A-202ENST00000398729 KLHDC1Q8N7A1 406 aa10.8□□□□□ -0.68
VCX3A-202ENST00000398729 OR4P4Q8NGL7 312 aa10.8□□□□□ -0.68
VCX3A-202ENST00000398729 OR52N1Q8NH53 320 aa10.8□□□□□ -0.68
VCX3A-202ENST00000398729 ZKSCAN7Q9P0L1 754 aaPredicted RBP10.8□□□□□ -0.68
VCX3A-202ENST00000398729 DPM3Q9P2X0 92 aa10.8□□□□□ -0.68
VCX3A-202ENST00000398729 CLEC2DQ9UHP7 191 aa10.8□□□□□ -0.68
VCX3A-202ENST00000398729 FOXJ3Q9UPW0 622 aa10.8□□□□□ -0.68
VCX3A-202ENST00000398729 HSPE1-MOB4S4R3N1 261 aa10.8□□□□□ -0.68
VCX3A-202ENST00000398729 KIAA2026Q5HYC2 2103 aa10.79□□□□□ -0.68
VCX3A-202ENST00000398729 MEGF11A6BM72 1044 aa10.79□□□□□ -0.68
VCX3A-202ENST00000398729 ZNF729A6NN14 1252 aaPredicted RBP10.79□□□□□ -0.68
VCX3A-202ENST00000398729 HSPB6O14558 160 aa10.79□□□□□ -0.68
VCX3A-202ENST00000398729 TOR1AO14656 332 aa10.79□□□□□ -0.68
VCX3A-202ENST00000398729 HTR3BO95264 441 aa10.79□□□□□ -0.68
VCX3A-202ENST00000398729 TSPAN15O95858 294 aa10.79□□□□□ -0.68
VCX3A-202ENST00000398729 CSF1P09603 554 aa10.79□□□□□ -0.68
VCX3A-202ENST00000398729 VSIG10L2P0DP72 767 aa10.79□□□□□ -0.68
VCX3A-202ENST00000398729 CD34P28906 385 aa10.79□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 25.5 ms