RNA–Protein interactions for RNA: ENST00000397760.8

PDLIM2-204, Transcript of PDZ and LIM domain 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PDLIM2, Length 1,847 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM2-204ENST00000397760 SHPKQ9UHJ6 478 aa16.48■□□□□ 0.23
PDLIM2-204ENST00000397760 DBX1A6NMT0 343 aa16.47■□□□□ 0.23
PDLIM2-204ENST00000397760 CDC14BO60729 498 aa16.47■□□□□ 0.23
PDLIM2-204ENST00000397760 GNB3P16520 340 aa16.47■□□□□ 0.23
PDLIM2-204ENST00000397760 KITLGP21583 273 aa16.47■□□□□ 0.23
PDLIM2-204ENST00000397760 CA6P23280 308 aa16.47■□□□□ 0.23
PDLIM2-204ENST00000397760 ARL6IP1Q15041 203 aa16.47■□□□□ 0.23
PDLIM2-204ENST00000397760 CEACAM21Q3KPI0 293 aa16.47■□□□□ 0.23
PDLIM2-204ENST00000397760 VHLLQ6RSH7 139 aa16.47■□□□□ 0.23
PDLIM2-204ENST00000397760 GVQW1Q8N7I0 195 aa16.47■□□□□ 0.23
PDLIM2-204ENST00000397760 TMEM185AQ8NFB2 350 aa16.47■□□□□ 0.23
PDLIM2-204ENST00000397760 PXT1Q8NFP0 134 aa16.47■□□□□ 0.23
PDLIM2-204ENST00000397760 OR5D18Q8NGL1 313 aa16.47■□□□□ 0.23
PDLIM2-204ENST00000397760 OR4K15Q8NH41 348 aa16.47■□□□□ 0.23
PDLIM2-204ENST00000397760 TERB2Q8NHR7 220 aa16.47■□□□□ 0.23
PDLIM2-204ENST00000397760 PPP1R1CQ8WVI7 109 aa16.47■□□□□ 0.23
PDLIM2-204ENST00000397760 RAB3CQ96E17 227 aa16.47■□□□□ 0.23
PDLIM2-204ENST00000397760 CPNE2Q96FN4 548 aaPredicted RBP16.47■□□□□ 0.23
PDLIM2-204ENST00000397760 LINC00052Q96N35 136 aa16.47■□□□□ 0.23
PDLIM2-204ENST00000397760 IGKV1-27A0A075B6S5 117 aa16.47■□□□□ 0.23
PDLIM2-204ENST00000397760 TIMM8AO60220 97 aaPredicted RBP16.47■□□□□ 0.23
PDLIM2-204ENST00000397760 SPDEFO95238 335 aa16.47■□□□□ 0.23
PDLIM2-204ENST00000397760 CSN2P05814 226 aa16.47■□□□□ 0.23
PDLIM2-204ENST00000397760 PTGFRP43088 359 aa16.47■□□□□ 0.23
PDLIM2-204ENST00000397760 ATP1B3P54709 279 aa16.47■□□□□ 0.23
PDLIM2-204ENST00000397760 RPS23P62266 143 aaKnown RBP16.47■□□□□ 0.23
PDLIM2-204ENST00000397760 SLC22A25Q6T423 547 aa16.47■□□□□ 0.23
PDLIM2-204ENST00000397760 SLC38A6Q8IZM9 456 aa16.47■□□□□ 0.23
PDLIM2-204ENST00000397760 THAP6Q8TBB0 222 aa16.47■□□□□ 0.23
PDLIM2-204ENST00000397760 HPSE2Q8WWQ2 592 aa16.47■□□□□ 0.23
PDLIM2-204ENST00000397760 TMEM59Q9BXS4 323 aa16.47■□□□□ 0.23
PDLIM2-204ENST00000397760 ESRP2Q9H6T0 727 aaKnown RBP16.47■□□□□ 0.23
PDLIM2-204ENST00000397760 ZNF230Q9UIE0 474 aaPredicted RBP16.47■□□□□ 0.23
PDLIM2-204ENST00000397760 OR2AT4A6NND4 320 aa16.46■□□□□ 0.23
PDLIM2-204ENST00000397760 SCO1O75880 301 aa16.46■□□□□ 0.23
PDLIM2-204ENST00000397760 RLN2P04090 185 aa16.46■□□□□ 0.23
PDLIM2-204ENST00000397760 MSMPQ1L6U9 139 aa16.46■□□□□ 0.23
PDLIM2-204ENST00000397760 TMEM128Q5BJH2 165 aa16.46■□□□□ 0.23
PDLIM2-204ENST00000397760 OR52W1Q6IF63 320 aa16.46■□□□□ 0.23
PDLIM2-204ENST00000397760 C17orf107Q6ZR85 190 aa16.46■□□□□ 0.23
PDLIM2-204ENST00000397760 FAM89BQ8N5H3 189 aa16.46■□□□□ 0.23
PDLIM2-204ENST00000397760 NUP37Q8NFH4 326 aa16.46■□□□□ 0.23
PDLIM2-204ENST00000397760 OR8G5Q8NG78 346 aa16.46■□□□□ 0.23
PDLIM2-204ENST00000397760 OR5A2Q8NGI9 324 aa16.46■□□□□ 0.23
PDLIM2-204ENST00000397760 TMEM171Q8WVE6 324 aa16.46■□□□□ 0.23
PDLIM2-204ENST00000397760 OR5P3Q8WZ94 311 aa16.46■□□□□ 0.23
PDLIM2-204ENST00000397760 NMES1Q9C002 83 aa16.46■□□□□ 0.23
PDLIM2-204ENST00000397760 PQLC2LA1A4F0 135 aa16.45■□□□□ 0.22
PDLIM2-204ENST00000397760 RNF222A6NCQ9 220 aa16.45■□□□□ 0.22
PDLIM2-204ENST00000397760 CA11O75493 328 aa16.45■□□□□ 0.22
PDLIM2-204ENST00000397760 GPM6AP51674 278 aa16.45■□□□□ 0.22
PDLIM2-204ENST00000397760 TUSC1Q2TAM9 212 aa16.45■□□□□ 0.22
PDLIM2-204ENST00000397760 NCMAPQ5T1S8 102 aa16.45■□□□□ 0.22
PDLIM2-204ENST00000397760 PLPPR2Q96GM1 343 aa16.45■□□□□ 0.22
PDLIM2-204ENST00000397760 VRK1Q99986 396 aaPredicted RBP16.45■□□□□ 0.22
PDLIM2-204ENST00000397760 FGF23Q9GZV9 251 aaPredicted RBP16.45■□□□□ 0.22
PDLIM2-204ENST00000397760 DUSP13Q9UII6 198 aa16.45■□□□□ 0.22
PDLIM2-204ENST00000397760 CFAP46Q8IYW2 2715 aa16.45■□□□□ 0.22
PDLIM2-204ENST00000397760 DIDO1Q9BTC0 2240 aaKnown RBP16.45■□□□□ 0.22
PDLIM2-204ENST00000397760 TRBV6-7A0A0A0MS04 114 aa16.45■□□□□ 0.22
PDLIM2-204ENST00000397760 ZNF732B4DXR9 585 aa16.45■□□□□ 0.22
PDLIM2-204ENST00000397760 NAT2P11245 290 aa16.45■□□□□ 0.22
PDLIM2-204ENST00000397760 C1QL2Q7Z5L3 287 aa16.45■□□□□ 0.22
PDLIM2-204ENST00000397760 LRP11Q86VZ4 500 aa16.45■□□□□ 0.22
PDLIM2-204ENST00000397760 ST8SIA4Q92187 359 aa16.45■□□□□ 0.22
PDLIM2-204ENST00000397760 TMEM100Q9NV29 134 aa16.45■□□□□ 0.22
PDLIM2-204ENST00000397760 ATP23Q9Y6H3 246 aa16.45■□□□□ 0.22
PDLIM2-204ENST00000397760 ZFYVE26Q68DK2 2539 aa16.44■□□□□ 0.22
PDLIM2-204ENST00000397760 A0A0A6YYD4 124 aa16.44■□□□□ 0.22
PDLIM2-204ENST00000397760 MFNGO00587 321 aa16.44■□□□□ 0.22
PDLIM2-204ENST00000397760 MPIG6BO95866 241 aa16.44■□□□□ 0.22
PDLIM2-204ENST00000397760 TMEM225BP0DP42 221 aa16.44■□□□□ 0.22
PDLIM2-204ENST00000397760 ADAM5Q6NVV9 412 aa16.44■□□□□ 0.22
PDLIM2-204ENST00000397760 TMEM17Q86X19 198 aa16.44■□□□□ 0.22
PDLIM2-204ENST00000397760 STPG2Q8N412 459 aa16.44■□□□□ 0.22
PDLIM2-204ENST00000397760 INO80EQ8NBZ0 244 aaPredicted RBP16.44■□□□□ 0.22
PDLIM2-204ENST00000397760 S100A13Q99584 98 aa16.44■□□□□ 0.22
PDLIM2-204ENST00000397760 GPR132Q9UNW8 380 aa16.44■□□□□ 0.22
PDLIM2-204ENST00000397760 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP16.43■□□□□ 0.22
PDLIM2-204ENST00000397760 POM121CA8CG34 1229 aa16.43■□□□□ 0.22
PDLIM2-204ENST00000397760 PLATP00750 562 aa16.43■□□□□ 0.22
PDLIM2-204ENST00000397760 KLF3P57682 345 aaPredicted RBP16.43■□□□□ 0.22
PDLIM2-204ENST00000397760 PLAC9Q5JTB6 97 aa16.43■□□□□ 0.22
PDLIM2-204ENST00000397760 TMEM104Q8NE00 496 aa16.43■□□□□ 0.22
PDLIM2-204ENST00000397760 SYT3Q9BQG1 590 aa16.43■□□□□ 0.22
PDLIM2-204ENST00000397760 NICN1Q9BSH3 213 aa16.43■□□□□ 0.22
PDLIM2-204ENST00000397760 ADAT1Q9BUB4 502 aaKnown RBP16.43■□□□□ 0.22
PDLIM2-204ENST00000397760 HIVEP3Q5T1R4 2406 aa16.43■□□□□ 0.22
PDLIM2-204ENST00000397760 OR5B21A6NL26 309 aa16.42■□□□□ 0.22
PDLIM2-204ENST00000397760 SPRY1O43609 319 aaPredicted RBP16.42■□□□□ 0.22
PDLIM2-204ENST00000397760 IGHV3-13P01766 116 aa16.42■□□□□ 0.22
PDLIM2-204ENST00000397760 PMP2P02689 132 aa16.42■□□□□ 0.22
PDLIM2-204ENST00000397760 FPR2P25090 351 aa16.42■□□□□ 0.22
PDLIM2-204ENST00000397760 PSMB6P28072 239 aa16.42■□□□□ 0.22
PDLIM2-204ENST00000397760 TMEM50BP56557 158 aa16.42■□□□□ 0.22
PDLIM2-204ENST00000397760 TAS2R46P59540 309 aa16.42■□□□□ 0.22
PDLIM2-204ENST00000397760 OR8G1Q15617 311 aa16.42■□□□□ 0.22
PDLIM2-204ENST00000397760 MICBQ29980 383 aa16.42■□□□□ 0.22
PDLIM2-204ENST00000397760 SLC22A6Q4U2R8 563 aa16.42■□□□□ 0.22
PDLIM2-204ENST00000397760 PEG10Q86TG7 708 aaKnown RBP16.42■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 52.1 ms