RNA–Protein interactions for RNA: ENST00000397728.7

LSS-202, Transcript of lanosterol synthase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LSS, Length 4,936 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSS-202ENST00000397728 CACNA1DQ01668 2161 aa13.36□□□□□ -0.27
LSS-202ENST00000397728 DTYMKP23919 212 aa13.36□□□□□ -0.27
LSS-202ENST00000397728 BTG1P62324 171 aa13.36□□□□□ -0.27
LSS-202ENST00000397728 IGFBP7Q16270 282 aa13.36□□□□□ -0.27
LSS-202ENST00000397728 MPV17LQ2QL34 196 aa13.36□□□□□ -0.27
LSS-202ENST00000397728 NSUN5P2Q63ZY6 315 aa13.36□□□□□ -0.27
LSS-202ENST00000397728 OR8G5Q8NG78 346 aa13.36□□□□□ -0.27
LSS-202ENST00000397728 ERGIC1Q969X5 290 aa13.36□□□□□ -0.27
LSS-202ENST00000397728 DDOQ99489 341 aa13.36□□□□□ -0.27
LSS-202ENST00000397728 MS4A7Q9GZW8 240 aaPredicted RBP13.36□□□□□ -0.27
LSS-202ENST00000397728 FAM212BQ9NTI7 297 aaPredicted RBP13.36□□□□□ -0.27
LSS-202ENST00000397728 ZDHHC8Q9ULC8 765 aa13.36□□□□□ -0.27
LSS-202ENST00000397728 NAAAQ02083 359 aa13.35□□□□□ -0.27
LSS-202ENST00000397728 CMTM3Q96MX0 182 aa13.35□□□□□ -0.27
LSS-202ENST00000397728 CCL19Q99731 98 aa13.35□□□□□ -0.27
LSS-202ENST00000397728 NKX2-6A6NCS4 301 aa13.35□□□□□ -0.27
LSS-202ENST00000397728 OOEPA6NGQ2 149 aa13.35□□□□□ -0.27
LSS-202ENST00000397728 CMTM2Q8TAZ6 248 aa13.35□□□□□ -0.27
LSS-202ENST00000397728 DAZAP1Q96EP5 407 aaKnown RBP13.35□□□□□ -0.27
LSS-202ENST00000397728 CRYM-AS1A6NIL9 109 aa13.35□□□□□ -0.27
LSS-202ENST00000397728 SNAI3Q3KNW1 292 aa13.35□□□□□ -0.27
LSS-202ENST00000397728 CIB3Q96Q77 187 aaPredicted RBP13.35□□□□□ -0.27
LSS-202ENST00000397728 PLXNA4Q9HCM2 1894 aa13.35□□□□□ -0.27
LSS-202ENST00000397728 SMPD2O60906 423 aa13.35□□□□□ -0.27
LSS-202ENST00000397728 OPN1MWP04001 364 aa13.35□□□□□ -0.27
LSS-202ENST00000397728 OPN1MW2P0DN77 364 aa13.35□□□□□ -0.27
LSS-202ENST00000397728 OPN1MW3P0DN78 364 aa13.35□□□□□ -0.27
LSS-202ENST00000397728 LHX2P50458 406 aa13.35□□□□□ -0.27
LSS-202ENST00000397728 SCAND1P57086 179 aa13.35□□□□□ -0.27
LSS-202ENST00000397728 TMEM128Q5BJH2 165 aa13.35□□□□□ -0.27
LSS-202ENST00000397728 ALKAL2Q6UX46 152 aa13.35□□□□□ -0.27
LSS-202ENST00000397728 IL34Q6ZMJ4 242 aa13.35□□□□□ -0.27
LSS-202ENST00000397728 MOB3AQ96BX8 217 aa13.35□□□□□ -0.27
LSS-202ENST00000397728 ARPC5LQ9BPX5 153 aa13.35□□□□□ -0.27
LSS-202ENST00000397728 TUBG2Q9NRH3 451 aa13.35□□□□□ -0.27
LSS-202ENST00000397728 MTFP1Q9UDX5 166 aa13.35□□□□□ -0.27
LSS-202ENST00000397728 ZG16O60844 167 aa13.34□□□□□ -0.27
LSS-202ENST00000397728 CLDN18P56856 261 aa13.34□□□□□ -0.27
LSS-202ENST00000397728 TGIF2LYQ8IUE0 185 aa13.34□□□□□ -0.27
LSS-202ENST00000397728 TGIF2LXQ8IUE1 241 aa13.34□□□□□ -0.27
LSS-202ENST00000397728 OR5AP2Q8NGF4 316 aa13.34□□□□□ -0.27
LSS-202ENST00000397728 SLIRPQ9GZT3 109 aaKnown RBP13.34□□□□□ -0.27
LSS-202ENST00000397728 USF3Q68DE3 2245 aa13.34□□□□□ -0.27
LSS-202ENST00000397728 POM121CA8CG34 1229 aa13.34□□□□□ -0.27
LSS-202ENST00000397728 SMLR1H3BR10 107 aa13.34□□□□□ -0.27
LSS-202ENST00000397728 CDK2AP1O14519 115 aa13.34□□□□□ -0.27
LSS-202ENST00000397728 LPAR6P43657 344 aa13.34□□□□□ -0.27
LSS-202ENST00000397728 OR13D1Q8NGV5 346 aa13.34□□□□□ -0.27
LSS-202ENST00000397728 LINC00470Q9BZP3 86 aa13.34□□□□□ -0.27
LSS-202ENST00000397728 HES4Q9HCC6 221 aa13.34□□□□□ -0.27
LSS-202ENST00000397728 CA10Q9NS85 328 aa13.34□□□□□ -0.27
LSS-202ENST00000397728 INSIG2Q9Y5U4 225 aa13.34□□□□□ -0.27
LSS-202ENST00000397728 THY1P04216 161 aa13.34□□□□□ -0.27
LSS-202ENST00000397728 VSIG8P0DPA2 414 aa13.34□□□□□ -0.27
LSS-202ENST00000397728 PMELP40967 661 aa13.34□□□□□ -0.27
LSS-202ENST00000397728 RAB5BP61020 215 aa13.34□□□□□ -0.27
LSS-202ENST00000397728 COL10A1Q03692 680 aa13.34□□□□□ -0.27
LSS-202ENST00000397728 CD276Q5ZPR3 534 aa13.34□□□□□ -0.27
LSS-202ENST00000397728 ACY3Q96HD9 319 aa13.34□□□□□ -0.27
LSS-202ENST00000397728 TMEM56Q96MV1 263 aa13.34□□□□□ -0.27
LSS-202ENST00000397728 SLC35D1Q9NTN3 355 aa13.34□□□□□ -0.27
LSS-202ENST00000397728 CSAG2Q9Y5P2 127 aa13.34□□□□□ -0.27
LSS-202ENST00000397728 A0A1B0GVG6 124 aa13.34□□□□□ -0.27
LSS-202ENST00000397728 ARL3P36405 182 aa13.34□□□□□ -0.27
LSS-202ENST00000397728 ROM1Q03395 351 aa13.34□□□□□ -0.27
LSS-202ENST00000397728 SCGB2A2Q13296 93 aa13.34□□□□□ -0.27
LSS-202ENST00000397728 FAM122CQ6P4D5 195 aa13.34□□□□□ -0.27
LSS-202ENST00000397728 SUMF2Q8NBJ7 301 aa13.34□□□□□ -0.27
LSS-202ENST00000397728 NANPQ8TBE9 248 aa13.34□□□□□ -0.27
LSS-202ENST00000397728 TMEM45BQ96B21 275 aa13.34□□□□□ -0.27
LSS-202ENST00000397728 RTN4RQ9BZR6 473 aa13.34□□□□□ -0.27
LSS-202ENST00000397728 ARV1Q9H2C2 271 aa13.34□□□□□ -0.27
LSS-202ENST00000397728 CECR9P0C854 216 aa13.33□□□□□ -0.28
LSS-202ENST00000397728 S100A2P29034 98 aa13.33□□□□□ -0.28
LSS-202ENST00000397728 LYG2Q86SG7 212 aa13.33□□□□□ -0.28
LSS-202ENST00000397728 SEMA5BQ9P283 1151 aa13.33□□□□□ -0.28
LSS-202ENST00000397728 AK3Q9UIJ7 227 aa13.33□□□□□ -0.28
LSS-202ENST00000397728 CLEC18AA5D8T8 446 aa13.33□□□□□ -0.28
LSS-202ENST00000397728 F8W036 122 aa13.33□□□□□ -0.28
LSS-202ENST00000397728 CPN1P15169 458 aa13.33□□□□□ -0.28
LSS-202ENST00000397728 RPS27AP62979 156 aaKnown RBP13.33□□□□□ -0.28
LSS-202ENST00000397728 ARTNQ5T4W7 220 aa13.33□□□□□ -0.28
LSS-202ENST00000397728 CLEC18CQ8NCF0 446 aa13.33□□□□□ -0.28
LSS-202ENST00000397728 PIMREGQ9BSJ6 248 aa13.33□□□□□ -0.28
LSS-202ENST00000397728 PSENENQ9NZ42 101 aa13.33□□□□□ -0.28
LSS-202ENST00000397728 PLXNA3P51805 1871 aa13.33□□□□□ -0.28
LSS-202ENST00000397728 CD40P25942 277 aa13.33□□□□□ -0.28
LSS-202ENST00000397728 TCF15Q12870 199 aa13.33□□□□□ -0.28
LSS-202ENST00000397728 UHRF2Q96PU4 802 aa13.33□□□□□ -0.28
LSS-202ENST00000397728 SIRT4Q9Y6E7 314 aaPredicted RBP13.33□□□□□ -0.28
LSS-202ENST00000397728 TRDCB7Z8K6 153 aa13.32□□□□□ -0.28
LSS-202ENST00000397728 B9A039 149 aa13.32□□□□□ -0.28
LSS-202ENST00000397728 GABRB1P18505 474 aa13.32□□□□□ -0.28
LSS-202ENST00000397728 RPS4XP62701 263 aaKnown RBP13.32□□□□□ -0.28
LSS-202ENST00000397728 UBA52P62987 128 aaKnown RBP13.32□□□□□ -0.28
LSS-202ENST00000397728 OPCMLQ14982 345 aa13.32□□□□□ -0.28
LSS-202ENST00000397728 TEX30Q5JUR7 227 aa13.32□□□□□ -0.28
LSS-202ENST00000397728 C10orf128Q5T292 105 aa13.32□□□□□ -0.28
LSS-202ENST00000397728 DYRK2Q92630 601 aa13.32□□□□□ -0.28
LSS-202ENST00000397728 TCEAL7Q9BRU2 100 aa13.32□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 37.2 ms