RNA–Protein interactions for RNA: ENST00000397428.7

SYNE4-203, Transcript of spectrin repeat containing nuclear envelope family member 4, humanhuman

TSL 3

Gene SYNE4, Length 382 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE4-203ENST00000397428 PSMB11A5LHX3 300 aa9.44□□□□□ -0.9
SYNE4-203ENST00000397428 ZNF729A6NN14 1252 aaPredicted RBP9.44□□□□□ -0.9
SYNE4-203ENST00000397428 G3V2T6 193 aa9.44□□□□□ -0.9
SYNE4-203ENST00000397428 SIRPB1O00241 398 aa9.44□□□□□ -0.9
SYNE4-203ENST00000397428 KDM4BO94953 1096 aa9.44□□□□□ -0.9
SYNE4-203ENST00000397428 MT-ND2P03891 347 aa9.44□□□□□ -0.9
SYNE4-203ENST00000397428 NHLRC4P0CG21 123 aaPredicted RBP9.44□□□□□ -0.9
SYNE4-203ENST00000397428 UBCP0CG48 685 aaKnown RBP9.44□□□□□ -0.9
SYNE4-203ENST00000397428 MNDAP41218 407 aa9.44□□□□□ -0.9
SYNE4-203ENST00000397428 RPL23AP62750 156 aaKnown RBP9.44□□□□□ -0.9
SYNE4-203ENST00000397428 ZNF85Q03923 595 aa9.44□□□□□ -0.9
SYNE4-203ENST00000397428 TMED1Q13445 227 aa9.44□□□□□ -0.9
SYNE4-203ENST00000397428 FLOT2Q14254 428 aa9.44□□□□□ -0.9
SYNE4-203ENST00000397428 TMEM244Q5VVB8 128 aa9.44□□□□□ -0.9
SYNE4-203ENST00000397428 KDM4DQ6B0I6 523 aa9.44□□□□□ -0.9
SYNE4-203ENST00000397428 CCDC144NLQ6NUI1 221 aa9.44□□□□□ -0.9
SYNE4-203ENST00000397428 FDX2Q6P4F2 183 aa9.44□□□□□ -0.9
SYNE4-203ENST00000397428 LHFPL2Q6ZUX7 228 aa9.44□□□□□ -0.9
SYNE4-203ENST00000397428 RNF144BQ7Z419 303 aa9.44□□□□□ -0.9
SYNE4-203ENST00000397428 ZNF329Q86UD4 541 aa9.44□□□□□ -0.9
SYNE4-203ENST00000397428 SAXO1Q8IYX7 474 aa9.44□□□□□ -0.9
SYNE4-203ENST00000397428 CHST4Q8NCG5 386 aa9.44□□□□□ -0.9
SYNE4-203ENST00000397428 CCDC197Q8NCU1 140 aa9.44□□□□□ -0.9
SYNE4-203ENST00000397428 OR51D1Q8NGF3 324 aa9.44□□□□□ -0.9
SYNE4-203ENST00000397428 OR4D6Q8NGJ1 314 aa9.44□□□□□ -0.9
SYNE4-203ENST00000397428 SPSB1Q96BD6 273 aa9.44□□□□□ -0.9
SYNE4-203ENST00000397428 COQ2Q96H96 371 aa9.44□□□□□ -0.9
SYNE4-203ENST00000397428 MBOAT4Q96T53 435 aa9.44□□□□□ -0.9
SYNE4-203ENST00000397428 P2RX4Q99571 388 aa9.44□□□□□ -0.9
SYNE4-203ENST00000397428 NCOR1P1Q9H4R4 102 aa9.44□□□□□ -0.9
SYNE4-203ENST00000397428 LINC00574Q9H8X3 128 aa9.44□□□□□ -0.9
SYNE4-203ENST00000397428 EXOSC4Q9NPD3 245 aaKnown RBP9.44□□□□□ -0.9
SYNE4-203ENST00000397428 FRRS1LQ9P0K9 344 aa9.44□□□□□ -0.9
SYNE4-203ENST00000397428 GSTK1Q9Y2Q3 226 aa9.44□□□□□ -0.9
SYNE4-203ENST00000397428 RYR3Q15413 4870 aa9.43□□□□□ -0.9
SYNE4-203ENST00000397428 KBTBD11-OT1A0A1B0GTJ5 212 aa9.43□□□□□ -0.9
SYNE4-203ENST00000397428 LOC107986453A0A1B0GWG9 222 aa9.43□□□□□ -0.9
SYNE4-203ENST00000397428 FAM172BPA6NC97 362 aa9.43□□□□□ -0.9
SYNE4-203ENST00000397428 POLR2IP36954 125 aaKnown RBP9.43□□□□□ -0.9
SYNE4-203ENST00000397428 PTGFRP43088 359 aa9.43□□□□□ -0.9
SYNE4-203ENST00000397428 POU3F4P49335 361 aa9.43□□□□□ -0.9
SYNE4-203ENST00000397428 SNU13P55769 128 aaKnown RBP9.43□□□□□ -0.9
SYNE4-203ENST00000397428 KHDC1LQ5JSQ8 128 aa9.43□□□□□ -0.9
SYNE4-203ENST00000397428 C9orf152Q5JTZ5 239 aa9.43□□□□□ -0.9
SYNE4-203ENST00000397428 OR2W3Q7Z3T1 314 aa9.43□□□□□ -0.9
SYNE4-203ENST00000397428 KCTD20Q7Z5Y7 419 aa9.43□□□□□ -0.9
SYNE4-203ENST00000397428 OR2G2Q8NGZ5 317 aa9.43□□□□□ -0.9
SYNE4-203ENST00000397428 OR9G1Q8NH87 305 aa9.43□□□□□ -0.9
SYNE4-203ENST00000397428 CHPT1Q8WUD6 406 aa9.43□□□□□ -0.9
SYNE4-203ENST00000397428 DPF1Q92782 380 aa9.43□□□□□ -0.9
SYNE4-203ENST00000397428 PCDHB16Q9NRJ7 776 aa9.43□□□□□ -0.9
SYNE4-203ENST00000397428 ZMAT5Q9UDW3 170 aaKnown RBP9.43□□□□□ -0.9
SYNE4-203ENST00000397428 MOB4Q9Y3A3 225 aa9.43□□□□□ -0.9
SYNE4-203ENST00000397428 HSPE1-MOB4S4R3N1 261 aa9.43□□□□□ -0.9
SYNE4-203ENST00000397428 J3QR06 171 aa9.42□□□□□ -0.9
SYNE4-203ENST00000397428 SLC33A1O00400 549 aaPredicted RBP9.42□□□□□ -0.9
SYNE4-203ENST00000397428 DEGS1O15121 323 aa9.42□□□□□ -0.9
SYNE4-203ENST00000397428 GYG2O15488 501 aa9.42□□□□□ -0.9
SYNE4-203ENST00000397428 APOL3O95236 402 aa9.42□□□□□ -0.9
SYNE4-203ENST00000397428 OR3A4PP47883 348 aa9.42□□□□□ -0.9
SYNE4-203ENST00000397428 CCR9P51686 369 aa9.42□□□□□ -0.9
SYNE4-203ENST00000397428 SCN1BQ07699 218 aa9.42□□□□□ -0.9
SYNE4-203ENST00000397428 DCTN2Q13561 401 aaKnown RBP9.42□□□□□ -0.9
SYNE4-203ENST00000397428 CDK5R1Q15078 307 aa9.42□□□□□ -0.9
SYNE4-203ENST00000397428 ATP6AP1Q15904 470 aa9.42□□□□□ -0.9
SYNE4-203ENST00000397428 TP53I3Q53FA7 332 aa9.42□□□□□ -0.9
SYNE4-203ENST00000397428 KRBOX4Q5JUW0 171 aa9.42□□□□□ -0.9
SYNE4-203ENST00000397428 UNQ9370/PRO34162Q6UXP9 181 aa9.42□□□□□ -0.9
SYNE4-203ENST00000397428 SLC16A12Q6ZSM3 486 aa9.42□□□□□ -0.9
SYNE4-203ENST00000397428 C18orf65Q6ZTR6 163 aa9.42□□□□□ -0.9
SYNE4-203ENST00000397428 COMMD1Q8N668 190 aa9.42□□□□□ -0.9
SYNE4-203ENST00000397428 C5orf56Q8N8D9 126 aa9.42□□□□□ -0.9
SYNE4-203ENST00000397428 ZNF565Q8N9K5 539 aa9.42□□□□□ -0.9
SYNE4-203ENST00000397428 OR10H4Q8NGA5 316 aa9.42□□□□□ -0.9
SYNE4-203ENST00000397428 EME1Q96AY2 570 aa9.42□□□□□ -0.9
SYNE4-203ENST00000397428 SLC7A6OSQ96CW6 309 aaPredicted RBP9.42□□□□□ -0.9
SYNE4-203ENST00000397428 KIRREL1Q96J84 757 aa9.42□□□□□ -0.9
SYNE4-203ENST00000397428 HRASLS5Q96KN8 279 aa9.42□□□□□ -0.9
SYNE4-203ENST00000397428 NOL4LQ96MY1 436 aaPredicted RBP9.42□□□□□ -0.9
SYNE4-203ENST00000397428 OPALINQ96PE5 141 aa9.42□□□□□ -0.9
SYNE4-203ENST00000397428 ZNF649Q9BS31 505 aa9.42□□□□□ -0.9
SYNE4-203ENST00000397428 OR6C3Q9NZP0 311 aa9.42□□□□□ -0.9
SYNE4-203ENST00000397428 GNG8Q9UK08 70 aa9.42□□□□□ -0.9
SYNE4-203ENST00000397428 LSM4Q9Y4Z0 139 aaKnown RBP9.42□□□□□ -0.9
SYNE4-203ENST00000397428 KIAA2026Q5HYC2 2103 aa9.41□□□□□ -0.9
SYNE4-203ENST00000397428 DNAH9Q9NYC9 4486 aa9.41□□□□□ -0.9
SYNE4-203ENST00000397428 NPIPB11E5RHQ5 1161 aa9.41□□□□□ -0.9
SYNE4-203ENST00000397428 H0YHG0 523 aa9.41□□□□□ -0.9
SYNE4-203ENST00000397428 J3QRE1 110 aa9.41□□□□□ -0.9
SYNE4-203ENST00000397428 FGF16O43320 207 aa9.41□□□□□ -0.9
SYNE4-203ENST00000397428 IGHG2P01859 326 aa9.41□□□□□ -0.9
SYNE4-203ENST00000397428 SNRNP70P08621 437 aaKnown RBP9.41□□□□□ -0.9
SYNE4-203ENST00000397428 CCDC159P0C7I6 412 aa9.41□□□□□ -0.9
SYNE4-203ENST00000397428 NFYBP25208 207 aa9.41□□□□□ -0.9
SYNE4-203ENST00000397428 ATP6V1E1P36543 226 aa9.41□□□□□ -0.9
SYNE4-203ENST00000397428 NANOS3P60323 173 aaKnown RBP9.41□□□□□ -0.9
SYNE4-203ENST00000397428 DGCR2P98153 550 aa9.41□□□□□ -0.9
SYNE4-203ENST00000397428 EBI3Q14213 229 aa9.41□□□□□ -0.9
SYNE4-203ENST00000397428 DNAL1Q4LDG9 190 aa9.41□□□□□ -0.9
SYNE4-203ENST00000397428 C8orf86Q6ZUL3 223 aa9.41□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 37.7 ms