RNA–Protein interactions for RNA: ENST00000397099.1

SEC13-204, Transcript of SEC13 homolog, nuclear pore and COPII coat complex component, humanhuman

TSL 4

Gene SEC13, Length 555 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC13-204ENST00000397099 A0A0G2JK05 382 aa11.33□□□□□ -0.6
SEC13-204ENST00000397099 ODF3BA8MYP8 253 aa11.33□□□□□ -0.6
SEC13-204ENST00000397099 H3BUX3 64 aa11.33□□□□□ -0.6
SEC13-204ENST00000397099 SIRPB1O00241 398 aa11.33□□□□□ -0.6
SEC13-204ENST00000397099 ARG1P05089 322 aa11.33□□□□□ -0.6
SEC13-204ENST00000397099 COX7A1P24310 79 aa11.33□□□□□ -0.6
SEC13-204ENST00000397099 MAPK3P27361 379 aaPredicted RBP11.33□□□□□ -0.6
SEC13-204ENST00000397099 DUSP1P28562 367 aa11.33□□□□□ -0.6
SEC13-204ENST00000397099 BDKRB2P30411 391 aa11.33□□□□□ -0.6
SEC13-204ENST00000397099 PTGFRP43088 359 aa11.33□□□□□ -0.6
SEC13-204ENST00000397099 SOX2P48431 317 aa11.33□□□□□ -0.6
SEC13-204ENST00000397099 ARHGDIBP52566 201 aa11.33□□□□□ -0.6
SEC13-204ENST00000397099 DLX1P56177 255 aa11.33□□□□□ -0.6
SEC13-204ENST00000397099 RELBQ01201 579 aa11.33□□□□□ -0.6
SEC13-204ENST00000397099 BDH1Q02338 343 aa11.33□□□□□ -0.6
SEC13-204ENST00000397099 PAX5Q02548 391 aa11.33□□□□□ -0.6
SEC13-204ENST00000397099 RIPK1Q13546 671 aa11.33□□□□□ -0.6
SEC13-204ENST00000397099 GPR176Q14439 515 aa11.33□□□□□ -0.6
SEC13-204ENST00000397099 NHLRC3Q5JS37 347 aa11.33□□□□□ -0.6
SEC13-204ENST00000397099 RNLSQ5VYX0 342 aa11.33□□□□□ -0.6
SEC13-204ENST00000397099 DMKNQ6E0U4 476 aaPredicted RBP11.33□□□□□ -0.6
SEC13-204ENST00000397099 ASCL4Q6XD76 172 aa11.33□□□□□ -0.6
SEC13-204ENST00000397099 SATL1Q86VE3 508 aa11.33□□□□□ -0.6
SEC13-204ENST00000397099 ZNF565Q8N9K5 539 aa11.33□□□□□ -0.6
SEC13-204ENST00000397099 OR4S1Q8NGB4 309 aa11.33□□□□□ -0.6
SEC13-204ENST00000397099 ZNF596Q8TC21 504 aa11.33□□□□□ -0.6
SEC13-204ENST00000397099 TNFAIP8L1Q8WVP5 186 aa11.33□□□□□ -0.6
SEC13-204ENST00000397099 WFDC12Q8WWY7 111 aa11.33□□□□□ -0.6
SEC13-204ENST00000397099 RGP1Q92546 391 aaPredicted RBP11.33□□□□□ -0.6
SEC13-204ENST00000397099 BARHL1Q9BZE3 327 aa11.33□□□□□ -0.6
SEC13-204ENST00000397099 METTL9Q9H1A3 318 aa11.33□□□□□ -0.6
SEC13-204ENST00000397099 TMEM133Q9H2Q1 129 aa11.33□□□□□ -0.6
SEC13-204ENST00000397099 IFT22Q9H7X7 185 aa11.33□□□□□ -0.6
SEC13-204ENST00000397099 IL36RNQ9UBH0 155 aa11.33□□□□□ -0.6
SEC13-204ENST00000397099 ERGIC3Q9Y282 383 aa11.33□□□□□ -0.6
SEC13-204ENST00000397099 TRBV5-5A0A0J9YX44 114 aa11.32□□□□□ -0.6
SEC13-204ENST00000397099 SLC33A1O00400 549 aaPredicted RBP11.32□□□□□ -0.6
SEC13-204ENST00000397099 TIMM23O14925 209 aa11.32□□□□□ -0.6
SEC13-204ENST00000397099 CSTBP04080 98 aaKnown RBP11.32□□□□□ -0.6
SEC13-204ENST00000397099 GNAO1P09471 354 aa11.32□□□□□ -0.6
SEC13-204ENST00000397099 FSTP19883 344 aa11.32□□□□□ -0.6
SEC13-204ENST00000397099 ZNF93P35789 620 aaPredicted RBP11.32□□□□□ -0.6
SEC13-204ENST00000397099 DYNLT3P51808 116 aa11.32□□□□□ -0.6
SEC13-204ENST00000397099 WNT4P56705 351 aa11.32□□□□□ -0.6
SEC13-204ENST00000397099 PRB3Q04118 309 aaPredicted RBP11.32□□□□□ -0.6
SEC13-204ENST00000397099 KRBOX4Q5JUW0 171 aa11.32□□□□□ -0.6
SEC13-204ENST00000397099 Q6P435 159 aa11.32□□□□□ -0.6
SEC13-204ENST00000397099 CRIP3Q6Q6R5 217 aa11.32□□□□□ -0.6
SEC13-204ENST00000397099 HEPN1Q6WQI6 88 aa11.32□□□□□ -0.6
SEC13-204ENST00000397099 ZNF782Q6ZMW2 699 aaPredicted RBP11.32□□□□□ -0.6
SEC13-204ENST00000397099 ZNF485Q8NCK3 441 aa11.32□□□□□ -0.6
SEC13-204ENST00000397099 LINC01006Q8NI28 216 aa11.32□□□□□ -0.6
SEC13-204ENST00000397099 MYDGFQ969H8 173 aa11.32□□□□□ -0.6
SEC13-204ENST00000397099 MRPS24Q96EL2 167 aaKnown RBP11.32□□□□□ -0.6
SEC13-204ENST00000397099 CLEC7AQ9BXN2 247 aa11.32□□□□□ -0.6
SEC13-204ENST00000397099 ABCB10Q9NRK6 738 aa11.32□□□□□ -0.6
SEC13-204ENST00000397099 SCN3BQ9NY72 215 aa11.32□□□□□ -0.6
SEC13-204ENST00000397099 TAS2R4Q9NYW5 299 aa11.32□□□□□ -0.6
SEC13-204ENST00000397099 CLEC2DQ9UHP7 191 aa11.32□□□□□ -0.6
SEC13-204ENST00000397099 VWFP04275 2813 aa11.32□□□□□ -0.6
SEC13-204ENST00000397099 IGHV2-26A0A0B4J1V2 119 aa11.31□□□□□ -0.6
SEC13-204ENST00000397099 ODAMA1E959 279 aa11.31□□□□□ -0.6
SEC13-204ENST00000397099 GABRPO00591 440 aa11.31□□□□□ -0.6
SEC13-204ENST00000397099 C21orf33P30042 268 aaPredicted RBP11.31□□□□□ -0.6
SEC13-204ENST00000397099 SNU13P55769 128 aaKnown RBP11.31□□□□□ -0.6
SEC13-204ENST00000397099 SCN1BQ07699 218 aa11.31□□□□□ -0.6
SEC13-204ENST00000397099 DYNC1I2Q13409 638 aaKnown RBP11.31□□□□□ -0.6
SEC13-204ENST00000397099 DDI2Q5TDH0 399 aa11.31□□□□□ -0.6
SEC13-204ENST00000397099 XAF1Q6GPH4 301 aa11.31□□□□□ -0.6
SEC13-204ENST00000397099 ASPHD2Q6ICH7 369 aa11.31□□□□□ -0.6
SEC13-204ENST00000397099 BRICD5Q6PL45 260 aa11.31□□□□□ -0.6
SEC13-204ENST00000397099 TREML4Q6UXN2 200 aa11.31□□□□□ -0.6
SEC13-204ENST00000397099 TCF23Q7RTU1 214 aa11.31□□□□□ -0.6
SEC13-204ENST00000397099 BPIFB6Q8NFQ5 453 aa11.31□□□□□ -0.6
SEC13-204ENST00000397099 OR4D6Q8NGJ1 314 aa11.31□□□□□ -0.6
SEC13-204ENST00000397099 OR51A2Q8NGJ7 313 aa11.31□□□□□ -0.6
SEC13-204ENST00000397099 OR4C13Q8NGP0 309 aa11.31□□□□□ -0.6
SEC13-204ENST00000397099 AJUBAQ96IF1 538 aa11.31□□□□□ -0.6
SEC13-204ENST00000397099 CITED1Q99966 193 aa11.31□□□□□ -0.6
SEC13-204ENST00000397099 MND1Q9BWT6 205 aa11.31□□□□□ -0.6
SEC13-204ENST00000397099 NPFFR1Q9GZQ6 430 aa11.31□□□□□ -0.6
SEC13-204ENST00000397099 FAM192AQ9GZU8 254 aa11.31□□□□□ -0.6
SEC13-204ENST00000397099 FKBP14Q9NWM8 211 aa11.31□□□□□ -0.6
SEC13-204ENST00000397099 FBLN5Q9UBX5 448 aa11.31□□□□□ -0.6
SEC13-204ENST00000397099 FOXJ3Q9UPW0 622 aa11.31□□□□□ -0.6
SEC13-204ENST00000397099 KIAA2026Q5HYC2 2103 aa11.3□□□□□ -0.6
SEC13-204ENST00000397099 MEGF11A6BM72 1044 aa11.3□□□□□ -0.6
SEC13-204ENST00000397099 ZNF729A6NN14 1252 aaPredicted RBP11.3□□□□□ -0.6
SEC13-204ENST00000397099 WIPF1O43516 503 aa11.3□□□□□ -0.6
SEC13-204ENST00000397099 IGFBP3P17936 291 aaPredicted RBP11.3□□□□□ -0.6
SEC13-204ENST00000397099 HTR1DP28221 377 aa11.3□□□□□ -0.6
SEC13-204ENST00000397099 CEACAM3P40198 252 aa11.3□□□□□ -0.6
SEC13-204ENST00000397099 KIR2DS4P43632 304 aa11.3□□□□□ -0.6
SEC13-204ENST00000397099 PROK1P58294 105 aa11.3□□□□□ -0.6
SEC13-204ENST00000397099 AESQ08117 197 aa11.3□□□□□ -0.6
SEC13-204ENST00000397099 DOC2BQ14184 412 aa11.3□□□□□ -0.6
SEC13-204ENST00000397099 MPV17LQ2QL34 196 aa11.3□□□□□ -0.6
SEC13-204ENST00000397099 PAN3Q58A45 887 aaKnown RBP11.3□□□□□ -0.6
SEC13-204ENST00000397099 SLC16A12Q6ZSM3 486 aa11.3□□□□□ -0.6
SEC13-204ENST00000397099 Q6ZSV7 163 aa11.3□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 26.3 ms