RNA–Protein interactions for RNA: ENST00000396096.6

NUP50-202, Transcript of nucleoporin 50, humanhuman

TSL 1 (best) BASIC

Gene NUP50, Length 1,895 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP50-202ENST00000396096 SP6Q3SY56 376 aa14.35□□□□□ -0.11
NUP50-202ENST00000396096 IGSF11Q5DX21 431 aa14.35□□□□□ -0.11
NUP50-202ENST00000396096 HAGHLQ6PII5 290 aaPredicted RBP14.35□□□□□ -0.11
NUP50-202ENST00000396096 IGF2-ASQ6U949 168 aa14.35□□□□□ -0.11
NUP50-202ENST00000396096 VASH2Q86V25 355 aa14.35□□□□□ -0.11
NUP50-202ENST00000396096 LDLRAD3Q86YD5 345 aa14.35□□□□□ -0.11
NUP50-202ENST00000396096 MARC2Q969Z3 335 aa14.35□□□□□ -0.11
NUP50-202ENST00000396096 OR51I2Q9H344 312 aa14.35□□□□□ -0.11
NUP50-202ENST00000396096 IFT22Q9H7X7 185 aa14.35□□□□□ -0.11
NUP50-202ENST00000396096 ZFP57Q9NU63 452 aa14.35□□□□□ -0.11
NUP50-202ENST00000396096 IL36RNQ9UBH0 155 aa14.35□□□□□ -0.11
NUP50-202ENST00000396096 PCDHB10Q9UN67 800 aa14.35□□□□□ -0.11
NUP50-202ENST00000396096 KIR2DS1A0A191URI9 304 aa14.35□□□□□ -0.11
NUP50-202ENST00000396096 NUDT19A8MXV4 375 aa14.35□□□□□ -0.11
NUP50-202ENST00000396096 CTXN2P0C2S0 81 aa14.35□□□□□ -0.11
NUP50-202ENST00000396096 FAM157CP0CG43 387 aa14.35□□□□□ -0.11
NUP50-202ENST00000396096 RPL12P30050 165 aaKnown RBP14.35□□□□□ -0.11
NUP50-202ENST00000396096 KIR2DS4P43632 304 aa14.35□□□□□ -0.11
NUP50-202ENST00000396096 PMP22Q01453 160 aa14.35□□□□□ -0.11
NUP50-202ENST00000396096 KIR2DS1Q14954 304 aa14.35□□□□□ -0.11
NUP50-202ENST00000396096 GUSBP1Q15486 140 aa14.35□□□□□ -0.11
NUP50-202ENST00000396096 P4HA3Q7Z4N8 544 aa14.35□□□□□ -0.11
NUP50-202ENST00000396096 OR1S2Q8NGQ3 325 aa14.35□□□□□ -0.11
NUP50-202ENST00000396096 OR11L1Q8NGX0 322 aa14.35□□□□□ -0.11
NUP50-202ENST00000396096 PLEKHA2Q9HB19 425 aa14.35□□□□□ -0.11
NUP50-202ENST00000396096 FREM2Q5SZK8 3169 aa14.35□□□□□ -0.11
NUP50-202ENST00000396096 SPAARA0A1B0GVQ0 90 aa14.34□□□□□ -0.11
NUP50-202ENST00000396096 TRDCB7Z8K6 153 aa14.34□□□□□ -0.11
NUP50-202ENST00000396096 K7EPK0 472 aa14.34□□□□□ -0.11
NUP50-202ENST00000396096 LRP3O75074 770 aa14.34□□□□□ -0.11
NUP50-202ENST00000396096 TUSC2O75896 110 aa14.34□□□□□ -0.11
NUP50-202ENST00000396096 DIRAS3O95661 229 aa14.34□□□□□ -0.11
NUP50-202ENST00000396096 GAPDHP04406 335 aaKnown RBP14.34□□□□□ -0.11
NUP50-202ENST00000396096 PRKACAP17612 351 aa14.34□□□□□ -0.11
NUP50-202ENST00000396096 SRPXP78539 464 aa14.34□□□□□ -0.11
NUP50-202ENST00000396096 TGFBR3Q03167 851 aa14.34□□□□□ -0.11
NUP50-202ENST00000396096 LYZL2Q7Z4W2 148 aa14.34□□□□□ -0.11
NUP50-202ENST00000396096 FAM219AQ8IW50 185 aa14.34□□□□□ -0.11
NUP50-202ENST00000396096 FAM71E2Q8N5Q1 922 aa14.34□□□□□ -0.11
NUP50-202ENST00000396096 FDCSPQ8NFU4 85 aa14.34□□□□□ -0.11
NUP50-202ENST00000396096 TMED6Q8WW62 240 aa14.34□□□□□ -0.11
NUP50-202ENST00000396096 FBXO9Q9UK97 447 aaPredicted RBP14.34□□□□□ -0.11
NUP50-202ENST00000396096 ATP23Q9Y6H3 246 aa14.34□□□□□ -0.11
NUP50-202ENST00000396096 J3QT63 122 aa14.33□□□□□ -0.11
NUP50-202ENST00000396096 MPPED1O15442 326 aa14.33□□□□□ -0.11
NUP50-202ENST00000396096 TK1P04183 234 aa14.33□□□□□ -0.11
NUP50-202ENST00000396096 IGHV1-2P23083 117 aa14.33□□□□□ -0.11
NUP50-202ENST00000396096 GNRHRP30968 328 aa14.33□□□□□ -0.11
NUP50-202ENST00000396096 CCL11P51671 97 aa14.33□□□□□ -0.11
NUP50-202ENST00000396096 NUBP1P53384 320 aa14.33□□□□□ -0.11
NUP50-202ENST00000396096 OR2T2Q6IF00 324 aa14.33□□□□□ -0.11
NUP50-202ENST00000396096 FAM58AQ8N1B3 248 aa14.33□□□□□ -0.11
NUP50-202ENST00000396096 OR5T2Q8NGG2 359 aa14.33□□□□□ -0.11
NUP50-202ENST00000396096 AMDHD2Q9Y303 409 aa14.33□□□□□ -0.11
NUP50-202ENST00000396096 TMED3Q9Y3Q3 217 aa14.33□□□□□ -0.11
NUP50-202ENST00000396096 E5RGE8 158 aa14.33□□□□□ -0.12
NUP50-202ENST00000396096 CNOT4O95628 575 aaKnown RBP14.33□□□□□ -0.12
NUP50-202ENST00000396096 MBPP02686 304 aaPredicted RBP14.33□□□□□ -0.12
NUP50-202ENST00000396096 DUSP1P28562 367 aa14.33□□□□□ -0.12
NUP50-202ENST00000396096 SRSF6Q13247 344 aaKnown RBP14.33□□□□□ -0.12
NUP50-202ENST00000396096 MRPL49Q13405 166 aaKnown RBP14.33□□□□□ -0.12
NUP50-202ENST00000396096 HERPUD1Q15011 391 aa14.33□□□□□ -0.12
NUP50-202ENST00000396096 OR2A2Q6IF42 318 aa14.33□□□□□ -0.12
NUP50-202ENST00000396096 EIF5AL1Q6IS14 154 aaKnown RBP14.33□□□□□ -0.12
NUP50-202ENST00000396096 ZNF880Q6PDB4 577 aa14.33□□□□□ -0.12
NUP50-202ENST00000396096 FOXRED2Q8IWF2 684 aa14.33□□□□□ -0.12
NUP50-202ENST00000396096 SUMF2Q8NBJ7 301 aa14.33□□□□□ -0.12
NUP50-202ENST00000396096 MRPL30Q8TCC3 161 aaKnown RBP14.33□□□□□ -0.12
NUP50-202ENST00000396096 BOD1Q96IK1 185 aa14.33□□□□□ -0.12
NUP50-202ENST00000396096 ASF1BQ9NVP2 202 aa14.33□□□□□ -0.12
NUP50-202ENST00000396096 NSG2Q9Y328 171 aa14.33□□□□□ -0.12
NUP50-202ENST00000396096 LSM5Q9Y4Y9 91 aaKnown RBP14.33□□□□□ -0.12
NUP50-202ENST00000396096 C3orf85A0A1B0GTC6 90 aa14.32□□□□□ -0.12
NUP50-202ENST00000396096 AQP7O14520 342 aa14.32□□□□□ -0.12
NUP50-202ENST00000396096 PHF1O43189 567 aaPredicted RBP14.32□□□□□ -0.12
NUP50-202ENST00000396096 SMPD2O60906 423 aa14.32□□□□□ -0.12
NUP50-202ENST00000396096 SCTP09683 121 aa14.32□□□□□ -0.12
NUP50-202ENST00000396096 HOXB1P14653 301 aaPredicted RBP14.32□□□□□ -0.12
NUP50-202ENST00000396096 CA6P23280 308 aa14.32□□□□□ -0.12
NUP50-202ENST00000396096 TSC22D1Q15714 1073 aa14.32□□□□□ -0.12
NUP50-202ENST00000396096 FAM76BQ5HYJ3 339 aa14.32□□□□□ -0.12
NUP50-202ENST00000396096 TMEM268Q5VZI3 342 aa14.32□□□□□ -0.12
NUP50-202ENST00000396096 RPL7L1Q6DKI1 246 aaKnown RBP14.32□□□□□ -0.12
NUP50-202ENST00000396096 FAM214BQ7L5A3 538 aa14.32□□□□□ -0.12
NUP50-202ENST00000396096 BPIFCQ8NFQ6 507 aa14.32□□□□□ -0.12
NUP50-202ENST00000396096 LHFPL5Q8TAF8 219 aa14.32□□□□□ -0.12
NUP50-202ENST00000396096 SAT2Q96F10 170 aaPredicted RBP14.32□□□□□ -0.12
NUP50-202ENST00000396096 DOCK7Q96N67 2140 aa14.32□□□□□ -0.12
NUP50-202ENST00000396096 TP53RKQ96S44 253 aa14.32□□□□□ -0.12
NUP50-202ENST00000396096 RTL8AQ9BWD3 113 aa14.32□□□□□ -0.12
NUP50-202ENST00000396096 TMEM222Q9H0R3 208 aa14.32□□□□□ -0.12
NUP50-202ENST00000396096 SPEF1Q9Y4P9 236 aa14.32□□□□□ -0.12
NUP50-202ENST00000396096 TRAV24A0A0B4J272 114 aa14.31□□□□□ -0.12
NUP50-202ENST00000396096 TRAV17A0A0B4J275 112 aa14.31□□□□□ -0.12
NUP50-202ENST00000396096 UBE2NP61088 152 aaKnown RBP14.31□□□□□ -0.12
NUP50-202ENST00000396096 INO80CQ6PI98 192 aaPredicted RBP14.31□□□□□ -0.12
NUP50-202ENST00000396096 Q6ZT83 130 aa14.31□□□□□ -0.12
NUP50-202ENST00000396096 MYPOPQ86VE0 399 aaPredicted RBP14.31□□□□□ -0.12
NUP50-202ENST00000396096 ARL11Q969Q4 196 aa14.31□□□□□ -0.12
NUP50-202ENST00000396096 ZNF488Q96MN9 340 aa14.31□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms