RNA–Protein interactions for RNA: ENST00000394888.8

CPSF7-202, Transcript of cleavage and polyadenylation specific factor 7, humanhuman

APPRIS P4 TSL 2 BASIC

Gene CPSF7, Length 3,650 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF7-202ENST00000394888 ZNF818PQ6ZRF7 136 aa13.14□□□□□ -0.31
CPSF7-202ENST00000394888 SGPP2Q8IWX5 399 aa13.14□□□□□ -0.31
CPSF7-202ENST00000394888 ZNF488Q96MN9 340 aa13.14□□□□□ -0.31
CPSF7-202ENST00000394888 STRADBQ9C0K7 418 aa13.14□□□□□ -0.31
CPSF7-202ENST00000394888 FAM96BQ9Y3D0 163 aa13.14□□□□□ -0.31
CPSF7-202ENST00000394888 TRAV24A0A0B4J272 114 aa13.14□□□□□ -0.31
CPSF7-202ENST00000394888 GAPDHP04406 335 aaKnown RBP13.14□□□□□ -0.31
CPSF7-202ENST00000394888 MEOX1P50221 254 aa13.14□□□□□ -0.31
CPSF7-202ENST00000394888 GUSBP1Q15486 140 aa13.14□□□□□ -0.31
CPSF7-202ENST00000394888 TSC22D1Q15714 1073 aa13.14□□□□□ -0.31
CPSF7-202ENST00000394888 HIKESHIQ53FT3 197 aa13.14□□□□□ -0.31
CPSF7-202ENST00000394888 SLC35G3Q8N808 338 aa13.14□□□□□ -0.31
CPSF7-202ENST00000394888 OR5L1Q8NGL2 311 aa13.14□□□□□ -0.31
CPSF7-202ENST00000394888 MRPL30Q8TCC3 161 aaKnown RBP13.14□□□□□ -0.31
CPSF7-202ENST00000394888 POM121Q96HA1 1249 aa13.14□□□□□ -0.31
CPSF7-202ENST00000394888 NKX6-2Q9C056 277 aaPredicted RBP13.14□□□□□ -0.31
CPSF7-202ENST00000394888 C1QTNF9BB2RNN3 333 aa13.13□□□□□ -0.31
CPSF7-202ENST00000394888 MT-CO3P00414 261 aa13.13□□□□□ -0.31
CPSF7-202ENST00000394888 GLAP06280 429 aa13.13□□□□□ -0.31
CPSF7-202ENST00000394888 S100A10P60903 97 aa13.13□□□□□ -0.31
CPSF7-202ENST00000394888 SRSF6Q13247 344 aaKnown RBP13.13□□□□□ -0.31
CPSF7-202ENST00000394888 BCL2L2Q92843 193 aaPredicted RBP13.13□□□□□ -0.31
CPSF7-202ENST00000394888 GTF3C1Q12789 2109 aa13.13□□□□□ -0.31
CPSF7-202ENST00000394888 ARGFXA6NJG6 315 aa13.13□□□□□ -0.31
CPSF7-202ENST00000394888 TOR1AO14656 332 aa13.13□□□□□ -0.31
CPSF7-202ENST00000394888 TSPAN4O14817 238 aa13.13□□□□□ -0.31
CPSF7-202ENST00000394888 CTRB1P17538 263 aa13.13□□□□□ -0.31
CPSF7-202ENST00000394888 FXYD4P59646 89 aa13.13□□□□□ -0.31
CPSF7-202ENST00000394888 CTRB2Q6GPI1 263 aa13.13□□□□□ -0.31
CPSF7-202ENST00000394888 EXTL1Q92935 676 aa13.13□□□□□ -0.31
CPSF7-202ENST00000394888 MGAQ8IWI9 3026 aa13.13□□□□□ -0.31
CPSF7-202ENST00000394888 TMEM50AO95807 157 aa13.12□□□□□ -0.31
CPSF7-202ENST00000394888 HAAOP46952 286 aa13.12□□□□□ -0.31
CPSF7-202ENST00000394888 DHRS13Q6UX07 377 aa13.12□□□□□ -0.31
CPSF7-202ENST00000394888 UBAC2Q8NBM4 344 aa13.12□□□□□ -0.31
CPSF7-202ENST00000394888 TAF9BQ9HBM6 251 aa13.12□□□□□ -0.31
CPSF7-202ENST00000394888 ARID1AO14497 2285 aa13.12□□□□□ -0.31
CPSF7-202ENST00000394888 PCNX2A6NKB5 2137 aa13.12□□□□□ -0.31
CPSF7-202ENST00000394888 SLC22A20A6NK97 555 aa13.12□□□□□ -0.31
CPSF7-202ENST00000394888 KIAA1324LA8MWY0 1029 aaPredicted RBP13.12□□□□□ -0.31
CPSF7-202ENST00000394888 HFEQ30201 348 aa13.12□□□□□ -0.31
CPSF7-202ENST00000394888 TMEM56Q96MV1 263 aa13.12□□□□□ -0.31
CPSF7-202ENST00000394888 ZDHHC11Q9H8X9 412 aa13.12□□□□□ -0.31
CPSF7-202ENST00000394888 TMEM56-RWDD3S4R434 201 aa13.12□□□□□ -0.31
CPSF7-202ENST00000394888 RHBDL1O75783 438 aa13.12□□□□□ -0.31
CPSF7-202ENST00000394888 DIRAS3O95661 229 aa13.12□□□□□ -0.31
CPSF7-202ENST00000394888 CELA3BP08861 270 aa13.12□□□□□ -0.31
CPSF7-202ENST00000394888 ZNF14P17017 642 aaPredicted RBP13.12□□□□□ -0.31
CPSF7-202ENST00000394888 NPBWR1P48145 328 aa13.12□□□□□ -0.31
CPSF7-202ENST00000394888 FOXRED2Q8IWF2 684 aa13.12□□□□□ -0.31
CPSF7-202ENST00000394888 OR1K1Q8NGR3 316 aa13.12□□□□□ -0.31
CPSF7-202ENST00000394888 SAT2Q96F10 170 aaPredicted RBP13.12□□□□□ -0.31
CPSF7-202ENST00000394888 PAPOLGQ9BWT3 736 aaKnown RBP13.12□□□□□ -0.31
CPSF7-202ENST00000394888 SH3BGRL3Q9H299 93 aa13.12□□□□□ -0.31
CPSF7-202ENST00000394888 R4GN57 208 aa13.12□□□□□ -0.31
CPSF7-202ENST00000394888 CLEC18AA5D8T8 446 aa13.11□□□□□ -0.31
CPSF7-202ENST00000394888 RBMXP38159 391 aaKnown RBP13.11□□□□□ -0.31
CPSF7-202ENST00000394888 CAV2P51636 162 aa13.11□□□□□ -0.31
CPSF7-202ENST00000394888 RAB1AP62820 205 aa13.11□□□□□ -0.31
CPSF7-202ENST00000394888 PJVKQ0ZLH3 352 aa13.11□□□□□ -0.31
CPSF7-202ENST00000394888 AIMP2Q13155 320 aaKnown RBP13.11□□□□□ -0.31
CPSF7-202ENST00000394888 RNPS1Q15287 305 aaKnown RBP13.11□□□□□ -0.31
CPSF7-202ENST00000394888 ABHD17BQ5VST6 288 aa13.11□□□□□ -0.31
CPSF7-202ENST00000394888 Q6P435 159 aa13.11□□□□□ -0.31
CPSF7-202ENST00000394888 CLEC18CQ8NCF0 446 aa13.11□□□□□ -0.31
CPSF7-202ENST00000394888 CPNE2Q96FN4 548 aaPredicted RBP13.11□□□□□ -0.31
CPSF7-202ENST00000394888 PARPBPQ9NWS1 579 aa13.11□□□□□ -0.31
CPSF7-202ENST00000394888 FARS2O95363 451 aaKnown RBP13.11□□□□□ -0.31
CPSF7-202ENST00000394888 NMSQ5H8A3 153 aa13.11□□□□□ -0.31
CPSF7-202ENST00000394888 LOXL4Q96JB6 756 aa13.11□□□□□ -0.31
CPSF7-202ENST00000394888 NRIP2Q9BQI9 281 aa13.11□□□□□ -0.31
CPSF7-202ENST00000394888 GINS3Q9BRX5 216 aa13.11□□□□□ -0.31
CPSF7-202ENST00000394888 SUCNR1Q9BXA5 334 aa13.11□□□□□ -0.31
CPSF7-202ENST00000394888 TMEM222Q9H0R3 208 aa13.11□□□□□ -0.31
CPSF7-202ENST00000394888 UQCC1Q9NVA1 299 aa13.11□□□□□ -0.31
CPSF7-202ENST00000394888 PURGQ9UJV8 347 aaKnown RBP13.11□□□□□ -0.31
CPSF7-202ENST00000394888 SLC7A11Q9UPY5 501 aa13.11□□□□□ -0.31
CPSF7-202ENST00000394888 OR8U9P0C7N5 309 aa13.11□□□□□ -0.31
CPSF7-202ENST00000394888 RND3P61587 244 aa13.11□□□□□ -0.31
CPSF7-202ENST00000394888 MALLQ13021 153 aa13.11□□□□□ -0.31
CPSF7-202ENST00000394888 OR8U1Q8NH10 309 aa13.11□□□□□ -0.31
CPSF7-202ENST00000394888 OR51I2Q9H344 312 aa13.11□□□□□ -0.31
CPSF7-202ENST00000394888 IFT22Q9H7X7 185 aa13.11□□□□□ -0.31
CPSF7-202ENST00000394888 ZNF286AQ9HBT8 521 aa13.11□□□□□ -0.31
CPSF7-202ENST00000394888 TRBV6-6A0A0A6YYG2 114 aa13.1□□□□□ -0.31
CPSF7-202ENST00000394888 ZNF732B4DXR9 585 aa13.1□□□□□ -0.31
CPSF7-202ENST00000394888 TAAR5O14804 337 aa13.1□□□□□ -0.31
CPSF7-202ENST00000394888 MPPED1O15442 326 aa13.1□□□□□ -0.31
CPSF7-202ENST00000394888 OR7C1O76099 320 aaPredicted RBP13.1□□□□□ -0.31
CPSF7-202ENST00000394888 SPP1P10451 314 aa13.1□□□□□ -0.31
CPSF7-202ENST00000394888 HES3Q5TGS1 186 aa13.1□□□□□ -0.31
CPSF7-202ENST00000394888 IL34Q6ZMJ4 242 aa13.1□□□□□ -0.31
CPSF7-202ENST00000394888 PNPLA5Q7Z6Z6 429 aaPredicted RBP13.1□□□□□ -0.31
CPSF7-202ENST00000394888 ZDHHC23Q8IYP9 409 aa13.1□□□□□ -0.31
CPSF7-202ENST00000394888 APOBEC3DQ96AK3 386 aaPredicted RBP13.1□□□□□ -0.31
CPSF7-202ENST00000394888 OR2S2Q9NQN1 319 aa13.1□□□□□ -0.31
CPSF7-202ENST00000394888 A0A0G2JRQ6 117 aa13.1□□□□□ -0.31
CPSF7-202ENST00000394888 ZNF705EA8MWA4 302 aaPredicted RBP13.1□□□□□ -0.31
CPSF7-202ENST00000394888 WT1P19544 449 aaPredicted RBP13.1□□□□□ -0.31
CPSF7-202ENST00000394888 NHLH2Q02577 135 aa13.1□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms