RNA–Protein interactions for RNA: ENST00000394820.8

NFKB1-202, Transcript of nuclear factor kappa B subunit 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene NFKB1, Length 3,693 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NFKB1-202ENST00000394820 CHST1O43916 411 aa11.53□□□□□ -0.56
NFKB1-202ENST00000394820 CCL4P13236 92 aa11.53□□□□□ -0.56
NFKB1-202ENST00000394820 CALCRP30988 508 aa11.53□□□□□ -0.56
NFKB1-202ENST00000394820 GPM6AP51674 278 aa11.53□□□□□ -0.56
NFKB1-202ENST00000394820 LINC00469Q8N7U9 141 aa11.53□□□□□ -0.56
NFKB1-202ENST00000394820 COLCA2A8K830 154 aa11.53□□□□□ -0.56
NFKB1-202ENST00000394820 SERPINA7P05543 415 aa11.53□□□□□ -0.56
NFKB1-202ENST00000394820 TBPP20226 339 aa11.53□□□□□ -0.56
NFKB1-202ENST00000394820 SHBQ15464 509 aa11.53□□□□□ -0.56
NFKB1-202ENST00000394820 SURF2Q15527 256 aaPredicted RBP11.53□□□□□ -0.56
NFKB1-202ENST00000394820 IGFBP7Q16270 282 aa11.53□□□□□ -0.56
NFKB1-202ENST00000394820 PSMF1Q92530 271 aa11.53□□□□□ -0.56
NFKB1-202ENST00000394820 SPIN2AQ99865 258 aa11.53□□□□□ -0.56
NFKB1-202ENST00000394820 SPIN2BQ9BPZ2 258 aa11.53□□□□□ -0.56
NFKB1-202ENST00000394820 SLC25A31Q9H0C2 315 aa11.53□□□□□ -0.56
NFKB1-202ENST00000394820 CYTL1Q9NRR1 136 aa11.53□□□□□ -0.56
NFKB1-202ENST00000394820 COA4Q9NYJ1 87 aa11.53□□□□□ -0.56
NFKB1-202ENST00000394820 A0A087X0M5 115 aa11.53□□□□□ -0.56
NFKB1-202ENST00000394820 A0A1B0GX30 115 aa11.53□□□□□ -0.56
NFKB1-202ENST00000394820 FIGNL2A6NMB9 653 aa11.53□□□□□ -0.56
NFKB1-202ENST00000394820 SMIM6P0DI80 62 aa11.53□□□□□ -0.56
NFKB1-202ENST00000394820 GDF1P27539 372 aa11.53□□□□□ -0.56
NFKB1-202ENST00000394820 SUPT4H1P63272 117 aaKnown RBP11.53□□□□□ -0.56
NFKB1-202ENST00000394820 CEACAM16Q2WEN9 425 aa11.53□□□□□ -0.56
NFKB1-202ENST00000394820 SNAI3Q3KNW1 292 aa11.53□□□□□ -0.56
NFKB1-202ENST00000394820 EIF4E3Q8N5X7 224 aaKnown RBP11.53□□□□□ -0.56
NFKB1-202ENST00000394820 LHX4Q969G2 390 aa11.53□□□□□ -0.56
NFKB1-202ENST00000394820 SMIM7Q9BQ49 75 aa11.53□□□□□ -0.56
NFKB1-202ENST00000394820 GGACTQ9BVM4 153 aa11.53□□□□□ -0.56
NFKB1-202ENST00000394820 C12orf49Q9H741 205 aa11.53□□□□□ -0.56
NFKB1-202ENST00000394820 NAA60Q9H7X0 242 aa11.53□□□□□ -0.56
NFKB1-202ENST00000394820 ATG2AQ2TAZ0 1938 aa11.52□□□□□ -0.56
NFKB1-202ENST00000394820 ZNF32P17041 273 aa11.52□□□□□ -0.56
NFKB1-202ENST00000394820 CNN3Q15417 329 aaKnown RBP11.52□□□□□ -0.56
NFKB1-202ENST00000394820 HMGN3Q15651 99 aa11.52□□□□□ -0.56
NFKB1-202ENST00000394820 ZNF787Q6DD87 383 aa11.52□□□□□ -0.56
NFKB1-202ENST00000394820 RHBDD2Q6NTF9 364 aa11.52□□□□□ -0.56
NFKB1-202ENST00000394820 MKXQ8IYA7 352 aa11.52□□□□□ -0.56
NFKB1-202ENST00000394820 EDEM2Q9BV94 578 aa11.52□□□□□ -0.56
NFKB1-202ENST00000394820 BCO1Q9HAY6 547 aa11.52□□□□□ -0.56
NFKB1-202ENST00000394820 BARX1Q9HBU1 254 aaPredicted RBP11.52□□□□□ -0.56
NFKB1-202ENST00000394820 PLA2G3Q9NZ20 509 aa11.52□□□□□ -0.56
NFKB1-202ENST00000394820 WIPF3A6NGB9 483 aa11.52□□□□□ -0.57
NFKB1-202ENST00000394820 DVL1O14640 695 aa11.52□□□□□ -0.57
NFKB1-202ENST00000394820 CHRNA7P36544 502 aa11.52□□□□□ -0.57
NFKB1-202ENST00000394820 GRB2P62993 217 aaKnown RBP11.52□□□□□ -0.57
NFKB1-202ENST00000394820 EWSR1Q01844 656 aaKnown RBP eCLIP11.52□□□□□ -0.57
NFKB1-202ENST00000394820 GAMTQ14353 236 aa11.52□□□□□ -0.57
NFKB1-202ENST00000394820 ZNF66Q6ZN08 573 aa11.52□□□□□ -0.57
NFKB1-202ENST00000394820 IL22RA1Q8N6P7 574 aa11.52□□□□□ -0.57
NFKB1-202ENST00000394820 RNF166Q96A37 237 aaPredicted RBP11.52□□□□□ -0.57
NFKB1-202ENST00000394820 FAM210BQ96KR6 192 aa11.52□□□□□ -0.57
NFKB1-202ENST00000394820 KCNK17Q96T54 332 aa11.52□□□□□ -0.57
NFKB1-202ENST00000394820 TMEM204Q9BSN7 226 aa11.52□□□□□ -0.57
NFKB1-202ENST00000394820 CCL28Q9NRJ3 127 aa11.52□□□□□ -0.57
NFKB1-202ENST00000394820 C19orf25Q9UFG5 118 aaPredicted RBP11.52□□□□□ -0.57
NFKB1-202ENST00000394820 NCOA6Q14686 2063 aaPredicted RBP11.52□□□□□ -0.57
NFKB1-202ENST00000394820 BTBD17A6NE02 478 aa11.51□□□□□ -0.57
NFKB1-202ENST00000394820 SERPINE3A8MV23 424 aa11.51□□□□□ -0.57
NFKB1-202ENST00000394820 TRAPPC2LH3BP13 241 aa11.51□□□□□ -0.57
NFKB1-202ENST00000394820 P04436 131 aa11.51□□□□□ -0.57
NFKB1-202ENST00000394820 NR2C1P13056 603 aa11.51□□□□□ -0.57
NFKB1-202ENST00000394820 GALNSP34059 522 aa11.51□□□□□ -0.57
NFKB1-202ENST00000394820 PLGLB1Q02325 96 aa11.51□□□□□ -0.57
NFKB1-202ENST00000394820 TLE4Q04727 773 aa11.51□□□□□ -0.57
NFKB1-202ENST00000394820 ARL6IP1Q15041 203 aa11.51□□□□□ -0.57
NFKB1-202ENST00000394820 MAML2Q8IZL2 1156 aaPredicted RBP11.51□□□□□ -0.57
NFKB1-202ENST00000394820 OSR2Q8N2R0 312 aa11.51□□□□□ -0.57
NFKB1-202ENST00000394820 ST8SIA1Q92185 356 aa11.51□□□□□ -0.57
NFKB1-202ENST00000394820 MYOTQ9UBF9 498 aa11.51□□□□□ -0.57
NFKB1-202ENST00000394820 IGHV5-10-1A0A0J9YXX1 117 aa11.51□□□□□ -0.57
NFKB1-202ENST00000394820 C5orf49A4QMS7 147 aa11.51□□□□□ -0.57
NFKB1-202ENST00000394820 KRASP01116 189 aa11.51□□□□□ -0.57
NFKB1-202ENST00000394820 HEXAP06865 529 aa11.51□□□□□ -0.57
NFKB1-202ENST00000394820 PGA4P0DJD7 388 aa11.51□□□□□ -0.57
NFKB1-202ENST00000394820 PGA5P0DJD9 388 aa11.51□□□□□ -0.57
NFKB1-202ENST00000394820 CARD18P57730 90 aa11.51□□□□□ -0.57
NFKB1-202ENST00000394820 CXorf67Q86X51 503 aaPredicted RBP11.51□□□□□ -0.57
NFKB1-202ENST00000394820 OR10S1Q8NGN2 331 aa11.51□□□□□ -0.57
NFKB1-202ENST00000394820 OR4F5Q8NH21 305 aa11.51□□□□□ -0.57
NFKB1-202ENST00000394820 OXGR1Q96P68 337 aa11.51□□□□□ -0.57
NFKB1-202ENST00000394820 OR4F4Q96R69 305 aa11.51□□□□□ -0.57
NFKB1-202ENST00000394820 CCNL2Q96S94 520 aaPredicted RBP11.51□□□□□ -0.57
NFKB1-202ENST00000394820 ZNF665Q9H7R5 613 aa11.51□□□□□ -0.57
NFKB1-202ENST00000394820 UCK1Q9HA47 277 aa11.51□□□□□ -0.57
NFKB1-202ENST00000394820 TRAPPC2LQ9UL33 140 aa11.51□□□□□ -0.57
NFKB1-202ENST00000394820 IGKV1-9A0A0C4DH69 117 aa11.51□□□□□ -0.57
NFKB1-202ENST00000394820 ANKUB1A6NFN9 424 aa11.51□□□□□ -0.57
NFKB1-202ENST00000394820 SIRPB1O00241 398 aa11.51□□□□□ -0.57
NFKB1-202ENST00000394820 DHRS3O75911 302 aa11.51□□□□□ -0.57
NFKB1-202ENST00000394820 TCN2P20062 427 aa11.51□□□□□ -0.57
NFKB1-202ENST00000394820 ANOS1P23352 680 aa11.51□□□□□ -0.57
NFKB1-202ENST00000394820 POC1AQ8NBT0 407 aa11.51□□□□□ -0.57
NFKB1-202ENST00000394820 EXTL1Q92935 676 aa11.51□□□□□ -0.57
NFKB1-202ENST00000394820 UTP23Q9BRU9 249 aaKnown RBP11.51□□□□□ -0.57
NFKB1-202ENST00000394820 ATG101Q9BSB4 218 aa11.51□□□□□ -0.57
NFKB1-202ENST00000394820 SLC25A22Q9H936 323 aa11.51□□□□□ -0.57
NFKB1-202ENST00000394820 SLC7A10Q9NS82 523 aa11.51□□□□□ -0.57
NFKB1-202ENST00000394820 DNAJB11Q9UBS4 358 aa11.51□□□□□ -0.57
NFKB1-202ENST00000394820 ERRFI1Q9UJM3 462 aaPredicted RBP11.51□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms