RNA–Protein interactions for RNA: ENST00000394801.8

UBE2D3-207, Transcript of ubiquitin conjugating enzyme E2 D3, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene UBE2D3, Length 2,368 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D3-207ENST00000394801 LIAT1Q6ZQX7 453 aa13.14□□□□□ -0.31
UBE2D3-207ENST00000394801 GLYATL2Q8WU03 294 aa13.14□□□□□ -0.31
UBE2D3-207ENST00000394801 MSI2Q96DH6 328 aaKnown RBP13.14□□□□□ -0.31
UBE2D3-207ENST00000394801 HS3ST6Q96QI5 342 aa13.14□□□□□ -0.31
UBE2D3-207ENST00000394801 HIST1H2AAQ96QV6 131 aa13.14□□□□□ -0.31
UBE2D3-207ENST00000394801 C12orf49Q9H741 205 aa13.14□□□□□ -0.31
UBE2D3-207ENST00000394801 FAM86C1Q9NVL1 165 aa13.14□□□□□ -0.31
UBE2D3-207ENST00000394801 NDRG3Q9UGV2 375 aa13.14□□□□□ -0.31
UBE2D3-207ENST00000394801 PCDHB10Q9UN67 800 aa13.14□□□□□ -0.31
UBE2D3-207ENST00000394801 PCP4L1A6NKN8 68 aa13.14□□□□□ -0.31
UBE2D3-207ENST00000394801 TRAPPC2LH3BP13 241 aa13.14□□□□□ -0.31
UBE2D3-207ENST00000394801 FAM157CP0CG43 387 aa13.14□□□□□ -0.31
UBE2D3-207ENST00000394801 TNFSF10P50591 281 aa13.14□□□□□ -0.31
UBE2D3-207ENST00000394801 B2MP61769 119 aa13.14□□□□□ -0.31
UBE2D3-207ENST00000394801 SUMF1Q8NBK3 374 aa13.14□□□□□ -0.31
UBE2D3-207ENST00000394801 OR5L1Q8NGL2 311 aa13.14□□□□□ -0.31
UBE2D3-207ENST00000394801 NANOS1Q8WY41 292 aaKnown RBP13.14□□□□□ -0.31
UBE2D3-207ENST00000394801 GTF3AQ92664 365 aaKnown RBP13.14□□□□□ -0.31
UBE2D3-207ENST00000394801 C18orf12Q96KH6 178 aa13.14□□□□□ -0.31
UBE2D3-207ENST00000394801 PLK3Q9H4B4 646 aa13.14□□□□□ -0.31
UBE2D3-207ENST00000394801 Q9N2K0 584 aa13.14□□□□□ -0.31
UBE2D3-207ENST00000394801 OR5B21A6NL26 309 aa13.13□□□□□ -0.31
UBE2D3-207ENST00000394801 H7C1Q1 480 aa13.13□□□□□ -0.31
UBE2D3-207ENST00000394801 H7C2Y5 167 aa13.13□□□□□ -0.31
UBE2D3-207ENST00000394801 PPYP01298 95 aa13.13□□□□□ -0.31
UBE2D3-207ENST00000394801 AADACP22760 399 aa13.13□□□□□ -0.31
UBE2D3-207ENST00000394801 HOXA1P49639 335 aaPredicted RBP13.13□□□□□ -0.31
UBE2D3-207ENST00000394801 EIF5AP63241 154 aaKnown RBP13.13□□□□□ -0.31
UBE2D3-207ENST00000394801 SP6Q3SY56 376 aa13.13□□□□□ -0.31
UBE2D3-207ENST00000394801 LINC00596Q86U02 117 aa13.13□□□□□ -0.31
UBE2D3-207ENST00000394801 BATF2Q8N1L9 274 aa13.13□□□□□ -0.31
UBE2D3-207ENST00000394801 OR1S2Q8NGQ3 325 aa13.13□□□□□ -0.31
UBE2D3-207ENST00000394801 SAV1Q9H4B6 383 aaPredicted RBP13.13□□□□□ -0.31
UBE2D3-207ENST00000394801 ANKRD30BLA7E2S9 258 aa13.13□□□□□ -0.31
UBE2D3-207ENST00000394801 J3QW42 95 aa13.13□□□□□ -0.31
UBE2D3-207ENST00000394801 HERV-K104P61576 105 aa13.13□□□□□ -0.31
UBE2D3-207ENST00000394801 PHLDA2Q53GA4 152 aa13.13□□□□□ -0.31
UBE2D3-207ENST00000394801 IGSF11Q5DX21 431 aa13.13□□□□□ -0.31
UBE2D3-207ENST00000394801 ZNF573Q86YE8 665 aa13.13□□□□□ -0.31
UBE2D3-207ENST00000394801 FAM219AQ8IW50 185 aa13.13□□□□□ -0.31
UBE2D3-207ENST00000394801 CCDC71LQ8N9Z2 235 aa13.13□□□□□ -0.31
UBE2D3-207ENST00000394801 TMED6Q8WW62 240 aa13.13□□□□□ -0.31
UBE2D3-207ENST00000394801 GMPPAQ96IJ6 420 aaPredicted RBP13.13□□□□□ -0.31
UBE2D3-207ENST00000394801 PRRX2Q99811 253 aa13.13□□□□□ -0.31
UBE2D3-207ENST00000394801 SYNGR1O43759 233 aa13.12□□□□□ -0.31
UBE2D3-207ENST00000394801 ATG12O94817 140 aa13.12□□□□□ -0.31
UBE2D3-207ENST00000394801 RPL12P30050 165 aaKnown RBP13.12□□□□□ -0.31
UBE2D3-207ENST00000394801 KCNJ3P48549 501 aa13.12□□□□□ -0.31
UBE2D3-207ENST00000394801 SMCO1Q147U7 214 aa13.12□□□□□ -0.31
UBE2D3-207ENST00000394801 MDP1Q86V88 176 aa13.12□□□□□ -0.31
UBE2D3-207ENST00000394801 FAM185AQ8N0U4 392 aa13.12□□□□□ -0.31
UBE2D3-207ENST00000394801 LGI3Q8N145 548 aa13.12□□□□□ -0.31
UBE2D3-207ENST00000394801 LHX6Q9UPM6 363 aa13.12□□□□□ -0.31
UBE2D3-207ENST00000394801 DOCK7Q96N67 2140 aa13.12□□□□□ -0.31
UBE2D3-207ENST00000394801 CACNA1HO95180 2353 aa13.12□□□□□ -0.31
UBE2D3-207ENST00000394801 ZNF98A6NK75 572 aa13.12□□□□□ -0.31
UBE2D3-207ENST00000394801 NUDT19A8MXV4 375 aa13.12□□□□□ -0.31
UBE2D3-207ENST00000394801 GALR2O43603 387 aaPredicted RBP13.12□□□□□ -0.31
UBE2D3-207ENST00000394801 LILRA1O75019 489 aa13.12□□□□□ -0.31
UBE2D3-207ENST00000394801 GNG3P63215 75 aa13.12□□□□□ -0.31
UBE2D3-207ENST00000394801 LYZL2Q7Z4W2 148 aa13.12□□□□□ -0.31
UBE2D3-207ENST00000394801 LDLRAD3Q86YD5 345 aa13.12□□□□□ -0.31
UBE2D3-207ENST00000394801 PLEKHA2Q9HB19 425 aa13.12□□□□□ -0.31
UBE2D3-207ENST00000394801 SPACA1Q9HBV2 294 aa13.12□□□□□ -0.31
UBE2D3-207ENST00000394801 GLRX2Q9NS18 164 aa13.12□□□□□ -0.31
UBE2D3-207ENST00000394801 K7EPK0 472 aa13.11□□□□□ -0.31
UBE2D3-207ENST00000394801 SIGLEC5O15389 551 aa13.11□□□□□ -0.31
UBE2D3-207ENST00000394801 LRP3O75074 770 aa13.11□□□□□ -0.31
UBE2D3-207ENST00000394801 IGHG3P01860 377 aa13.11□□□□□ -0.31
UBE2D3-207ENST00000394801 HOXB1P14653 301 aaPredicted RBP13.11□□□□□ -0.31
UBE2D3-207ENST00000394801 GNRHRP30968 328 aa13.11□□□□□ -0.31
UBE2D3-207ENST00000394801 IL24Q13007 206 aa13.11□□□□□ -0.31
UBE2D3-207ENST00000394801 OR2A2Q6IF42 318 aa13.11□□□□□ -0.31
UBE2D3-207ENST00000394801 TMPRSS7Q7RTY8 843 aa13.11□□□□□ -0.31
UBE2D3-207ENST00000394801 FOXRED2Q8IWF2 684 aa13.11□□□□□ -0.31
UBE2D3-207ENST00000394801 FAM71E2Q8N5Q1 922 aa13.11□□□□□ -0.31
UBE2D3-207ENST00000394801 OR11L1Q8NGX0 322 aa13.11□□□□□ -0.31
UBE2D3-207ENST00000394801 PKIBQ9C010 78 aa13.11□□□□□ -0.31
UBE2D3-207ENST00000394801 RIMS4Q9H426 269 aaPredicted RBP13.11□□□□□ -0.31
UBE2D3-207ENST00000394801 ZFP57Q9NU63 452 aa13.11□□□□□ -0.31
UBE2D3-207ENST00000394801 IL36RNQ9UBH0 155 aa13.11□□□□□ -0.31
UBE2D3-207ENST00000394801 AMDHD2Q9Y303 409 aa13.11□□□□□ -0.31
UBE2D3-207ENST00000394801 MBPP02686 304 aaPredicted RBP13.1□□□□□ -0.31
UBE2D3-207ENST00000394801 GAPDHP04406 335 aaKnown RBP13.1□□□□□ -0.31
UBE2D3-207ENST00000394801 GLAP06280 429 aa13.1□□□□□ -0.31
UBE2D3-207ENST00000394801 HAGHLQ6PII5 290 aaPredicted RBP13.1□□□□□ -0.31
UBE2D3-207ENST00000394801 TMED3Q9Y3Q3 217 aa13.1□□□□□ -0.31
UBE2D3-207ENST00000394801 ATP23Q9Y6H3 246 aa13.1□□□□□ -0.31
UBE2D3-207ENST00000394801 TRBV6-6A0A0A6YYG2 114 aa13.1□□□□□ -0.31
UBE2D3-207ENST00000394801 KIR2DS1A0A191URI9 304 aa13.1□□□□□ -0.31
UBE2D3-207ENST00000394801 E5RGE8 158 aa13.1□□□□□ -0.31
UBE2D3-207ENST00000394801 MPPED1O15442 326 aa13.1□□□□□ -0.31
UBE2D3-207ENST00000394801 TUSC2O75896 110 aa13.1□□□□□ -0.31
UBE2D3-207ENST00000394801 TK1P04183 234 aa13.1□□□□□ -0.31
UBE2D3-207ENST00000394801 CTXN2P0C2S0 81 aa13.1□□□□□ -0.31
UBE2D3-207ENST00000394801 ZNF14P17017 642 aaPredicted RBP13.1□□□□□ -0.31
UBE2D3-207ENST00000394801 KIR2DS4P43632 304 aa13.1□□□□□ -0.31
UBE2D3-207ENST00000394801 RND3P61587 244 aa13.1□□□□□ -0.31
UBE2D3-207ENST00000394801 IL13RA2Q14627 380 aa13.1□□□□□ -0.31
UBE2D3-207ENST00000394801 KIR2DS1Q14954 304 aa13.1□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 40 ms