RNA–Protein interactions for RNA: ENST00000394331.3

HOXC6-202, Transcript of homeobox C6, humanhuman

TSL 1 (best) BASIC

Gene HOXC6, Length 2,943 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC6-202ENST00000394331 DUX1O43812 170 aa16.4■□□□□ 0.22
HOXC6-202ENST00000394331 TTRP02766 147 aa16.4■□□□□ 0.22
HOXC6-202ENST00000394331 TNFSF10P50591 281 aa16.4■□□□□ 0.22
HOXC6-202ENST00000394331 ZNF705AQ6ZN79 300 aaPredicted RBP16.4■□□□□ 0.22
HOXC6-202ENST00000394331 ZNF248Q8NDW4 579 aa16.4■□□□□ 0.22
HOXC6-202ENST00000394331 OR4D5Q8NGN0 318 aa16.4■□□□□ 0.22
HOXC6-202ENST00000394331 FOXN4Q96NZ1 517 aa16.4■□□□□ 0.22
HOXC6-202ENST00000394331 VN1R1Q9GZP7 353 aa16.4■□□□□ 0.22
HOXC6-202ENST00000394331 GAB2Q9UQC2 676 aa16.4■□□□□ 0.22
HOXC6-202ENST00000394331 CPAMD8Q8IZJ3 1885 aa16.4■□□□□ 0.22
HOXC6-202ENST00000394331 A0A1B0GX78 115 aa16.4■□□□□ 0.22
HOXC6-202ENST00000394331 ELLP55199 621 aaPredicted RBP16.4■□□□□ 0.22
HOXC6-202ENST00000394331 ADPRHL1Q8NDY3 354 aa16.4■□□□□ 0.22
HOXC6-202ENST00000394331 TMEM234Q8WY98 164 aa16.4■□□□□ 0.22
HOXC6-202ENST00000394331 OR10A2Q9H208 303 aa16.4■□□□□ 0.22
HOXC6-202ENST00000394331 SCGB1D1O95968 90 aa16.39■□□□□ 0.21
HOXC6-202ENST00000394331 RAB11AP62491 216 aa16.39■□□□□ 0.21
HOXC6-202ENST00000394331 COL5A1-AS1Q5SY13 56 aa16.39■□□□□ 0.21
HOXC6-202ENST00000394331 RIPPLY2Q5TAB7 128 aa16.39■□□□□ 0.21
HOXC6-202ENST00000394331 H1FOOQ8IZA3 346 aaPredicted RBP16.39■□□□□ 0.21
HOXC6-202ENST00000394331 AGMATQ9BSE5 352 aa16.39■□□□□ 0.21
HOXC6-202ENST00000394331 ZNF2Q9BSG1 426 aaPredicted RBP16.39■□□□□ 0.21
HOXC6-202ENST00000394331 CALHM2Q9HA72 323 aa16.39■□□□□ 0.21
HOXC6-202ENST00000394331 DNAH14Q0VDD8 3507 aa16.39■□□□□ 0.21
HOXC6-202ENST00000394331 TYMSP04818 313 aa16.39■□□□□ 0.21
HOXC6-202ENST00000394331 UMODP07911 640 aa16.39■□□□□ 0.21
HOXC6-202ENST00000394331 BCKDHBP21953 392 aa16.39■□□□□ 0.21
HOXC6-202ENST00000394331 TRA2AQ13595 282 aaKnown RBP eCLIP16.39■□□□□ 0.21
HOXC6-202ENST00000394331 LIAT1Q6ZQX7 453 aa16.39■□□□□ 0.21
HOXC6-202ENST00000394331 WFIKKN1Q96NZ8 548 aa16.39■□□□□ 0.21
HOXC6-202ENST00000394331 OR2J1Q9GZK6 312 aa16.39■□□□□ 0.21
HOXC6-202ENST00000394331 OR51B6Q9H340 312 aa16.39■□□□□ 0.21
HOXC6-202ENST00000394331 MSL2Q9HCI7 577 aa16.39■□□□□ 0.21
HOXC6-202ENST00000394331 LOC101059948A0A1B0GTJ6 334 aa16.39■□□□□ 0.21
HOXC6-202ENST00000394331 TNFSF13O75888 250 aa16.39■□□□□ 0.21
HOXC6-202ENST00000394331 PIAS2O75928 621 aa16.39■□□□□ 0.21
HOXC6-202ENST00000394331 WISP1O95388 367 aa16.39■□□□□ 0.21
HOXC6-202ENST00000394331 BCL2P10415 239 aa16.39■□□□□ 0.21
HOXC6-202ENST00000394331 MTCP1P56278 107 aa16.39■□□□□ 0.21
HOXC6-202ENST00000394331 VAMP2P63027 116 aa16.39■□□□□ 0.21
HOXC6-202ENST00000394331 HIST1H3AP68431 136 aa16.39■□□□□ 0.21
HOXC6-202ENST00000394331 EIF3IQ13347 325 aaKnown RBP16.39■□□□□ 0.21
HOXC6-202ENST00000394331 GSX1Q9H4S2 264 aaPredicted RBP16.39■□□□□ 0.21
HOXC6-202ENST00000394331 CACNA1CQ13936 2221 aa16.38■□□□□ 0.21
HOXC6-202ENST00000394331 BRWD1Q9NSI6 2320 aa16.38■□□□□ 0.21
HOXC6-202ENST00000394331 LCATP04180 440 aa16.38■□□□□ 0.21
HOXC6-202ENST00000394331 DBHP09172 617 aa16.38■□□□□ 0.21
HOXC6-202ENST00000394331 NKAIN1Q4KMZ8 207 aa16.38■□□□□ 0.21
HOXC6-202ENST00000394331 NUFIP2Q7Z417 695 aaKnown RBP16.38■□□□□ 0.21
HOXC6-202ENST00000394331 OR51G1Q8NGK1 321 aa16.38■□□□□ 0.21
HOXC6-202ENST00000394331 RNF133Q8WVZ7 376 aa16.38■□□□□ 0.21
HOXC6-202ENST00000394331 ZNF845Q96IR2 970 aaPredicted RBP16.38■□□□□ 0.21
HOXC6-202ENST00000394331 ABHD14BQ96IU4 210 aa16.38■□□□□ 0.21
HOXC6-202ENST00000394331 ZNF576Q9H609 170 aa16.38■□□□□ 0.21
HOXC6-202ENST00000394331 Q9N2K0 584 aa16.38■□□□□ 0.21
HOXC6-202ENST00000394331 CFHR1Q03591 330 aa16.38■□□□□ 0.21
HOXC6-202ENST00000394331 DNM1P34Q6PK57 102 aa16.38■□□□□ 0.21
HOXC6-202ENST00000394331 CMTM1Q8IZ96 169 aa16.38■□□□□ 0.21
HOXC6-202ENST00000394331 OR5AS1Q8N127 324 aa16.38■□□□□ 0.21
HOXC6-202ENST00000394331 OR52M1Q8NGK5 317 aa16.38■□□□□ 0.21
HOXC6-202ENST00000394331 RELTQ969Z4 430 aa16.38■□□□□ 0.21
HOXC6-202ENST00000394331 PLEKHF2Q9H8W4 249 aa16.38■□□□□ 0.21
HOXC6-202ENST00000394331 AURKAIP1Q9NWT8 199 aaPredicted RBP16.38■□□□□ 0.21
HOXC6-202ENST00000394331 K7EP13 123 aa16.37■□□□□ 0.21
HOXC6-202ENST00000394331 TCF21O43680 179 aa16.37■□□□□ 0.21
HOXC6-202ENST00000394331 ZNF823P16415 610 aa16.37■□□□□ 0.21
HOXC6-202ENST00000394331 MDKP21741 143 aaPredicted RBP16.37■□□□□ 0.21
HOXC6-202ENST00000394331 RABEPKQ7Z6M1 372 aa16.37■□□□□ 0.21
HOXC6-202ENST00000394331 KMT5CQ86Y97 462 aa16.37■□□□□ 0.21
HOXC6-202ENST00000394331 LGI3Q8N145 548 aa16.37■□□□□ 0.21
HOXC6-202ENST00000394331 DNAJC4Q9NNZ3 241 aa16.37■□□□□ 0.21
HOXC6-202ENST00000394331 LAMP3Q9UQV4 416 aa16.37■□□□□ 0.21
HOXC6-202ENST00000394331 CEP290O15078 2479 aa16.37■□□□□ 0.21
HOXC6-202ENST00000394331 SOX1O00570 391 aaPredicted RBP16.37■□□□□ 0.21
HOXC6-202ENST00000394331 H2BFMP0C1H6 154 aa16.37■□□□□ 0.21
HOXC6-202ENST00000394331 IDH3GP51553 393 aaPredicted RBP16.37■□□□□ 0.21
HOXC6-202ENST00000394331 PIGPP57054 158 aa16.37■□□□□ 0.21
HOXC6-202ENST00000394331 SELENOTP62341 195 aa16.37■□□□□ 0.21
HOXC6-202ENST00000394331 LYZL2Q7Z4W2 148 aa16.37■□□□□ 0.21
HOXC6-202ENST00000394331 BANF2Q9H503 90 aa16.37■□□□□ 0.21
HOXC6-202ENST00000394331 GPR35Q9HC97 309 aa16.37■□□□□ 0.21
HOXC6-202ENST00000394331 COA3Q9Y2R0 106 aaPredicted RBP16.37■□□□□ 0.21
HOXC6-202ENST00000394331 HPNP05981 417 aa16.36■□□□□ 0.21
HOXC6-202ENST00000394331 SELEP16581 610 aa16.36■□□□□ 0.21
HOXC6-202ENST00000394331 BAXQ07812 192 aa16.36■□□□□ 0.21
HOXC6-202ENST00000394331 OR5I1Q13606 314 aa16.36■□□□□ 0.21
HOXC6-202ENST00000394331 ACSF3Q4G176 576 aaPredicted RBP16.36■□□□□ 0.21
HOXC6-202ENST00000394331 CISD2Q8N5K1 135 aaKnown RBP16.36■□□□□ 0.21
HOXC6-202ENST00000394331 OR2AJ1Q8NGZ0 328 aa16.36■□□□□ 0.21
HOXC6-202ENST00000394331 PECRQ9BY49 303 aa16.36■□□□□ 0.21
HOXC6-202ENST00000394331 IGSF23A1L1A6 192 aa16.36■□□□□ 0.21
HOXC6-202ENST00000394331 CDS2O95674 445 aa16.36■□□□□ 0.21
HOXC6-202ENST00000394331 ZNF20P17024 532 aa16.36■□□□□ 0.21
HOXC6-202ENST00000394331 OR3A4PP47883 348 aa16.36■□□□□ 0.21
HOXC6-202ENST00000394331 TEX43Q6ZNM6 134 aa16.36■□□□□ 0.21
HOXC6-202ENST00000394331 HIST2H2ABQ8IUE6 130 aaPredicted RBP16.36■□□□□ 0.21
HOXC6-202ENST00000394331 SSC4DQ8WTU2 575 aa16.36■□□□□ 0.21
HOXC6-202ENST00000394331 ST8SIA1Q92185 356 aa16.36■□□□□ 0.21
HOXC6-202ENST00000394331 LYRM2Q9NU23 88 aaPredicted RBP16.36■□□□□ 0.21
HOXC6-202ENST00000394331 NAT8Q9UHE5 227 aa16.36■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms