RNA–Protein interactions for RNA: ENST00000393546.8

PDLIM7-204, Transcript of PDZ and LIM domain 7, humanhuman

TSL 3

Gene PDLIM7, Length 671 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM7-204ENST00000393546 BCL6BQ8N143 479 aaPredicted RBP15.6■□□□□ 0.09
PDLIM7-204ENST00000393546 OR4D6Q8NGJ1 314 aa15.6■□□□□ 0.09
PDLIM7-204ENST00000393546 MRPS24Q96EL2 167 aaKnown RBP15.6■□□□□ 0.09
PDLIM7-204ENST00000393546 PPA2Q9H2U2 334 aa15.6■□□□□ 0.09
PDLIM7-204ENST00000393546 UNKLQ9H9P5 680 aaKnown RBP15.6■□□□□ 0.09
PDLIM7-204ENST00000393546 SIRT7Q9NRC8 400 aa15.6■□□□□ 0.09
PDLIM7-204ENST00000393546 GHRLQ9UBU3 117 aa15.6■□□□□ 0.09
PDLIM7-204ENST00000393546 IGHV1-69DA0A0B4J2H0 117 aa15.59■□□□□ 0.09
PDLIM7-204ENST00000393546 TNFAIP8O95379 198 aa15.59■□□□□ 0.09
PDLIM7-204ENST00000393546 IGHV1-69P01742 117 aa15.59■□□□□ 0.09
PDLIM7-204ENST00000393546 CALRP27797 417 aaKnown RBP15.59■□□□□ 0.09
PDLIM7-204ENST00000393546 RBM11P57052 281 aaKnown RBP15.59■□□□□ 0.09
PDLIM7-204ENST00000393546 ZNF273Q14593 569 aa15.59■□□□□ 0.09
PDLIM7-204ENST00000393546 PAN3Q58A45 887 aaKnown RBP15.59■□□□□ 0.09
PDLIM7-204ENST00000393546 C1orf100Q5SVJ3 147 aa15.59■□□□□ 0.09
PDLIM7-204ENST00000393546 METAP1DQ6UB28 335 aaPredicted RBP15.59■□□□□ 0.09
PDLIM7-204ENST00000393546 BRD3OSQ6XYD6 125 aa15.59■□□□□ 0.09
PDLIM7-204ENST00000393546 LINC00596Q86U02 117 aa15.59■□□□□ 0.09
PDLIM7-204ENST00000393546 JMJD8Q96S16 334 aa15.59■□□□□ 0.09
PDLIM7-204ENST00000393546 CUBNO60494 3623 aa15.59■□□□□ 0.09
PDLIM7-204ENST00000393546 TRDV1A0A1B0GX56 115 aa15.58■□□□□ 0.08
PDLIM7-204ENST00000393546 A0A1W2PP11 408 aa15.58■□□□□ 0.08
PDLIM7-204ENST00000393546 CSN2P05814 226 aa15.58■□□□□ 0.08
PDLIM7-204ENST00000393546 UBBP0CG47 229 aa15.58■□□□□ 0.08
PDLIM7-204ENST00000393546 CCL3L1P16619 93 aa15.58■□□□□ 0.08
PDLIM7-204ENST00000393546 GALP22466 123 aa15.58■□□□□ 0.08
PDLIM7-204ENST00000393546 P2RX3P56373 397 aa15.58■□□□□ 0.08
PDLIM7-204ENST00000393546 GUCA2AQ02747 115 aa15.58■□□□□ 0.08
PDLIM7-204ENST00000393546 AESQ08117 197 aa15.58■□□□□ 0.08
PDLIM7-204ENST00000393546 NCR3LG1Q68D85 454 aa15.58■□□□□ 0.08
PDLIM7-204ENST00000393546 CD200R1LQ6Q8B3 271 aa15.58■□□□□ 0.08
PDLIM7-204ENST00000393546 PDZD9Q8IXQ8 264 aa15.58■□□□□ 0.08
PDLIM7-204ENST00000393546 TPRX1Q8N7U7 411 aa15.58■□□□□ 0.08
PDLIM7-204ENST00000393546 LINC00312Q9Y6C7 94 aa15.58■□□□□ 0.08
PDLIM7-204ENST00000393546 A0A087WXM4 84 aa15.57■□□□□ 0.08
PDLIM7-204ENST00000393546 TRAV24A0A0B4J272 114 aa15.57■□□□□ 0.08
PDLIM7-204ENST00000393546 GEMIN2O14893 280 aaKnown RBP15.57■□□□□ 0.08
PDLIM7-204ENST00000393546 CRTAPO75718 401 aaPredicted RBP15.57■□□□□ 0.08
PDLIM7-204ENST00000393546 OR7C1O76099 320 aaPredicted RBP15.57■□□□□ 0.08
PDLIM7-204ENST00000393546 ZNF728P0DKX0 622 aa15.57■□□□□ 0.08
PDLIM7-204ENST00000393546 CD37P11049 281 aa15.57■□□□□ 0.08
PDLIM7-204ENST00000393546 HTR2CP28335 458 aa15.57■□□□□ 0.08
PDLIM7-204ENST00000393546 PSMD7P51665 324 aa15.57■□□□□ 0.08
PDLIM7-204ENST00000393546 MPV17LQ2QL34 196 aa15.57■□□□□ 0.08
PDLIM7-204ENST00000393546 KRBOX4Q5JUW0 171 aa15.57■□□□□ 0.08
PDLIM7-204ENST00000393546 SYT6Q5T7P8 510 aaPredicted RBP15.57■□□□□ 0.08
PDLIM7-204ENST00000393546 RUSC1-AS1Q66K80 236 aa15.57■□□□□ 0.08
PDLIM7-204ENST00000393546 SIGLECL1Q8N7X8 197 aa15.57■□□□□ 0.08
PDLIM7-204ENST00000393546 TNFRSF14Q92956 283 aa15.57■□□□□ 0.08
PDLIM7-204ENST00000393546 ZNF714Q96N38 554 aa15.57■□□□□ 0.08
PDLIM7-204ENST00000393546 BARHL1Q9BZE3 327 aa15.57■□□□□ 0.08
PDLIM7-204ENST00000393546 IFT22Q9H7X7 185 aa15.57■□□□□ 0.08
PDLIM7-204ENST00000393546 HEXA-AS1Q9H8Q6 139 aa15.57■□□□□ 0.08
PDLIM7-204ENST00000393546 AK6Q9Y3D8 172 aaKnown RBP15.57■□□□□ 0.08
PDLIM7-204ENST00000393546 DSCAML1Q8TD84 2053 aa15.56■□□□□ 0.08
PDLIM7-204ENST00000393546 MEX3AA1L020 520 aaKnown RBP15.56■□□□□ 0.08
PDLIM7-204ENST00000393546 C17orf98A8MV24 154 aa15.56■□□□□ 0.08
PDLIM7-204ENST00000393546 RNASEK-C17orf49H0YIS7 233 aa15.56■□□□□ 0.08
PDLIM7-204ENST00000393546 HSPB6O14558 160 aa15.56■□□□□ 0.08
PDLIM7-204ENST00000393546 VENTXO95231 258 aa15.56■□□□□ 0.08
PDLIM7-204ENST00000393546 RANBP1P43487 201 aa15.56■□□□□ 0.08
PDLIM7-204ENST00000393546 GLIPR1P48060 266 aa15.56■□□□□ 0.08
PDLIM7-204ENST00000393546 KCNJ3P48549 501 aa15.56■□□□□ 0.08
PDLIM7-204ENST00000393546 UBE2E1P51965 193 aa15.56■□□□□ 0.08
PDLIM7-204ENST00000393546 DLX1P56177 255 aa15.56■□□□□ 0.08
PDLIM7-204ENST00000393546 HILS1P60008 231 aa15.56■□□□□ 0.08
PDLIM7-204ENST00000393546 ERVFRD-1P60508 538 aa15.56■□□□□ 0.08
PDLIM7-204ENST00000393546 PRB3Q04118 309 aaPredicted RBP15.56■□□□□ 0.08
PDLIM7-204ENST00000393546 ATXN7L3Q14CW9 347 aaPredicted RBP15.56■□□□□ 0.08
PDLIM7-204ENST00000393546 NEDD8Q15843 81 aa15.56■□□□□ 0.08
PDLIM7-204ENST00000393546 TAF9Q16594 264 aa15.56■□□□□ 0.08
PDLIM7-204ENST00000393546 TUSC1Q2TAM9 212 aa15.56■□□□□ 0.08
PDLIM7-204ENST00000393546 TRAPPC6BQ86SZ2 158 aa15.56■□□□□ 0.08
PDLIM7-204ENST00000393546 C11orf42Q8N5U0 333 aa15.56■□□□□ 0.08
PDLIM7-204ENST00000393546 TSPAN14Q8NG11 270 aa15.56■□□□□ 0.08
PDLIM7-204ENST00000393546 OR6M1Q8NGM8 313 aa15.56■□□□□ 0.08
PDLIM7-204ENST00000393546 C1orf147Q96MC9 270 aaPredicted RBP15.56■□□□□ 0.08
PDLIM7-204ENST00000393546 SELENOIQ9C0D9 397 aa15.56■□□□□ 0.08
PDLIM7-204ENST00000393546 CST11Q9H112 138 aa15.56■□□□□ 0.08
PDLIM7-204ENST00000393546 BANF2Q9H503 90 aa15.56■□□□□ 0.08
PDLIM7-204ENST00000393546 PLGRKTQ9HBL7 147 aa15.56■□□□□ 0.08
PDLIM7-204ENST00000393546 ING3Q9NXR8 418 aa15.56■□□□□ 0.08
PDLIM7-204ENST00000393546 UBE2J1Q9Y385 318 aaPredicted RBP15.56■□□□□ 0.08
PDLIM7-204ENST00000393546 SOX21Q9Y651 276 aaPredicted RBP15.56■□□□□ 0.08
PDLIM7-204ENST00000393546 ATRQ13535 2644 aa15.56■□□□□ 0.08
PDLIM7-204ENST00000393546 TRGV10A0A0A0MS01 117 aa15.55■□□□□ 0.08
PDLIM7-204ENST00000393546 TRAV1-2A0A0B4J238 106 aa15.55■□□□□ 0.08
PDLIM7-204ENST00000393546 PDCD5O14737 125 aa15.55■□□□□ 0.08
PDLIM7-204ENST00000393546 SLC22A1O15245 554 aa15.55■□□□□ 0.08
PDLIM7-204ENST00000393546 RBP4P02753 201 aa15.55■□□□□ 0.08
PDLIM7-204ENST00000393546 MGMTP16455 207 aa15.55■□□□□ 0.08
PDLIM7-204ENST00000393546 MYL9P24844 172 aa15.55■□□□□ 0.08
PDLIM7-204ENST00000393546 DLX6P56179 175 aa15.55■□□□□ 0.08
PDLIM7-204ENST00000393546 KLRD1Q13241 179 aa15.55■□□□□ 0.08
PDLIM7-204ENST00000393546 ATAD3CQ5T2N8 411 aa15.55■□□□□ 0.08
PDLIM7-204ENST00000393546 SUMF2Q8NBJ7 301 aa15.55■□□□□ 0.08
PDLIM7-204ENST00000393546 CORO2AQ92828 525 aa15.55■□□□□ 0.08
PDLIM7-204ENST00000393546 ZDHHC16Q969W1 377 aa15.55■□□□□ 0.08
PDLIM7-204ENST00000393546 ZNF48Q96MX3 618 aaPredicted RBP15.55■□□□□ 0.08
PDLIM7-204ENST00000393546 DPCDQ9BVM2 203 aaPredicted RBP15.55■□□□□ 0.08
Retrieved 100 of 20,778 RNA–protein pairs in 39.5 ms