RNA–Protein interactions for RNA: ENST00000393119.6

MKS1-202, Transcript of Meckel syndrome, type 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene MKS1, Length 2,397 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MKS1-202ENST00000393119 HOXA1P49639 335 aaPredicted RBP12.73□□□□□ -0.37
MKS1-202ENST00000393119 NAAAQ02083 359 aa12.73□□□□□ -0.37
MKS1-202ENST00000393119 MPPED2Q15777 294 aa12.73□□□□□ -0.37
MKS1-202ENST00000393119 HOGA1Q86XE5 327 aa12.73□□□□□ -0.37
MKS1-202ENST00000393119 ADAT1Q9BUB4 502 aaKnown RBP12.73□□□□□ -0.37
MKS1-202ENST00000393119 DNTTIP1Q9H147 329 aa12.73□□□□□ -0.37
MKS1-202ENST00000393119 OBP2BQ9NPH6 170 aa12.73□□□□□ -0.37
MKS1-202ENST00000393119 DUSP13Q9UII6 198 aa12.73□□□□□ -0.37
MKS1-202ENST00000393119 PURGQ9UJV8 347 aaKnown RBP12.73□□□□□ -0.37
MKS1-202ENST00000393119 FAM74A7A6NL05 159 aa12.73□□□□□ -0.37
MKS1-202ENST00000393119 HS3ST1O14792 307 aa12.73□□□□□ -0.37
MKS1-202ENST00000393119 ID4P47928 161 aa12.73□□□□□ -0.37
MKS1-202ENST00000393119 ZNF154Q13106 437 aa12.73□□□□□ -0.37
MKS1-202ENST00000393119 PNLIPRP3Q17RR3 467 aa12.73□□□□□ -0.37
MKS1-202ENST00000393119 FAM74A3Q4VXF1 159 aa12.73□□□□□ -0.37
MKS1-202ENST00000393119 PRAMEF6Q5VXH4 476 aa12.73□□□□□ -0.37
MKS1-202ENST00000393119 ZSCAN4Q8NAM6 433 aaPredicted RBP12.73□□□□□ -0.37
MKS1-202ENST00000393119 SCCPDHQ8NBX0 429 aa12.73□□□□□ -0.37
MKS1-202ENST00000393119 OR13G1Q8NGZ3 307 aa12.73□□□□□ -0.37
MKS1-202ENST00000393119 USB1Q9BQ65 265 aaKnown RBP12.73□□□□□ -0.37
MKS1-202ENST00000393119 CMSS1Q9BQ75 279 aaKnown RBP12.73□□□□□ -0.37
MKS1-202ENST00000393119 SFXN3Q9BWM7 321 aa12.73□□□□□ -0.37
MKS1-202ENST00000393119 BARX1Q9HBU1 254 aaPredicted RBP12.73□□□□□ -0.37
MKS1-202ENST00000393119 ANAPC10Q9UM13 185 aa12.73□□□□□ -0.37
MKS1-202ENST00000393119 TRAV39A0A0B4J263 110 aa12.72□□□□□ -0.37
MKS1-202ENST00000393119 WNT9BO14905 357 aa12.72□□□□□ -0.37
MKS1-202ENST00000393119 CREBL2O60519 120 aaPredicted RBP12.72□□□□□ -0.37
MKS1-202ENST00000393119 CEBPDP49716 269 aaPredicted RBP12.72□□□□□ -0.37
MKS1-202ENST00000393119 GNG3P63215 75 aa12.72□□□□□ -0.37
MKS1-202ENST00000393119 PDZD9Q8IXQ8 264 aa12.72□□□□□ -0.37
MKS1-202ENST00000393119 ZNF442Q9H7R0 627 aa12.72□□□□□ -0.37
MKS1-202ENST00000393119 UFSP2Q9NUQ7 469 aa12.72□□□□□ -0.37
MKS1-202ENST00000393119 MPC1Q9Y5U8 109 aa12.72□□□□□ -0.37
MKS1-202ENST00000393119 DISC1C4P0D8 188 aa12.72□□□□□ -0.37
MKS1-202ENST00000393119 TRAPPC2LH3BP13 241 aa12.72□□□□□ -0.37
MKS1-202ENST00000393119 IFNA6P05013 189 aa12.72□□□□□ -0.37
MKS1-202ENST00000393119 OR4E1P0C645 316 aa12.72□□□□□ -0.37
MKS1-202ENST00000393119 RAC2P15153 192 aa12.72□□□□□ -0.37
MKS1-202ENST00000393119 AKR1C4P17516 323 aa12.72□□□□□ -0.37
MKS1-202ENST00000393119 H2BFSP57053 126 aa12.72□□□□□ -0.37
MKS1-202ENST00000393119 PPA1Q15181 289 aa12.72□□□□□ -0.37
MKS1-202ENST00000393119 DCAF12L2Q5VW00 463 aa12.72□□□□□ -0.37
MKS1-202ENST00000393119 GSG1LQ6UXU4 331 aa12.72□□□□□ -0.37
MKS1-202ENST00000393119 ST8SIA2Q92186 375 aa12.72□□□□□ -0.37
MKS1-202ENST00000393119 RDH5Q92781 318 aa12.72□□□□□ -0.37
MKS1-202ENST00000393119 CPNE2Q96FN4 548 aaPredicted RBP12.72□□□□□ -0.37
MKS1-202ENST00000393119 BOD1Q96IK1 185 aa12.72□□□□□ -0.37
MKS1-202ENST00000393119 TECTBQ96PL2 329 aa12.72□□□□□ -0.37
MKS1-202ENST00000393119 WDR13Q9H1Z4 485 aa12.72□□□□□ -0.37
MKS1-202ENST00000393119 EHFQ9NZC4 300 aa12.72□□□□□ -0.37
MKS1-202ENST00000393119 IL36GQ9NZH8 169 aa12.72□□□□□ -0.37
MKS1-202ENST00000393119 ZNF835Q9Y2P0 537 aa12.72□□□□□ -0.37
MKS1-202ENST00000393119 TRGV8A0A0C4DH27 118 aa12.71□□□□□ -0.37
MKS1-202ENST00000393119 SERPINE3A8MV23 424 aa12.71□□□□□ -0.37
MKS1-202ENST00000393119 CRHP06850 196 aa12.71□□□□□ -0.37
MKS1-202ENST00000393119 S100A12P80511 92 aa12.71□□□□□ -0.37
MKS1-202ENST00000393119 FGL1Q08830 312 aa12.71□□□□□ -0.37
MKS1-202ENST00000393119 OR5H2Q8NGV7 314 aa12.71□□□□□ -0.37
MKS1-202ENST00000393119 SYT3Q9BQG1 590 aa12.71□□□□□ -0.37
MKS1-202ENST00000393119 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP12.71□□□□□ -0.37
MKS1-202ENST00000393119 COL12A1Q99715 3063 aa12.71□□□□□ -0.37
MKS1-202ENST00000393119 OR5H14A6NHG9 310 aa12.71□□□□□ -0.38
MKS1-202ENST00000393119 IQCF6A8MYZ5 107 aa12.71□□□□□ -0.38
MKS1-202ENST00000393119 TIMM8AO60220 97 aaPredicted RBP12.71□□□□□ -0.38
MKS1-202ENST00000393119 PDCD6O75340 191 aa12.71□□□□□ -0.38
MKS1-202ENST00000393119 FCGR3AP08637 254 aa12.71□□□□□ -0.38
MKS1-202ENST00000393119 FGF12P61328 243 aa12.71□□□□□ -0.38
MKS1-202ENST00000393119 OR8G1Q15617 311 aa12.71□□□□□ -0.38
MKS1-202ENST00000393119 TIMM23BQ5SRD1 257 aa12.71□□□□□ -0.38
MKS1-202ENST00000393119 AADACL3Q5VUY0 350 aa12.71□□□□□ -0.38
MKS1-202ENST00000393119 C20orf204Q6ZNR8 217 aa12.71□□□□□ -0.38
MKS1-202ENST00000393119 SLC25A32Q9H2D1 315 aa12.71□□□□□ -0.38
MKS1-202ENST00000393119 OPA3Q9H6K4 179 aa12.71□□□□□ -0.38
MKS1-202ENST00000393119 MEX3AA1L020 520 aaKnown RBP12.7□□□□□ -0.38
MKS1-202ENST00000393119 ARPC5O15511 151 aa12.7□□□□□ -0.38
MKS1-202ENST00000393119 PPP1R1AQ13522 171 aa12.7□□□□□ -0.38
MKS1-202ENST00000393119 MEF2DQ14814 521 aa12.7□□□□□ -0.38
MKS1-202ENST00000393119 MKXQ8IYA7 352 aa12.7□□□□□ -0.38
MKS1-202ENST00000393119 COA4Q9NYJ1 87 aa12.7□□□□□ -0.38
MKS1-202ENST00000393119 TEX46H3BTG2 121 aa12.7□□□□□ -0.38
MKS1-202ENST00000393119 CCSO14618 274 aa12.7□□□□□ -0.38
MKS1-202ENST00000393119 APOC3P02656 99 aa12.7□□□□□ -0.38
MKS1-202ENST00000393119 RPA2P15927 270 aa12.7□□□□□ -0.38
MKS1-202ENST00000393119 GLRA1P23415 457 aa12.7□□□□□ -0.38
MKS1-202ENST00000393119 CDSNQ15517 529 aa12.7□□□□□ -0.38
MKS1-202ENST00000393119 HFEQ30201 348 aa12.7□□□□□ -0.38
MKS1-202ENST00000393119 CHRFAM7AQ494W8 412 aa12.7□□□□□ -0.38
MKS1-202ENST00000393119 C11orf53Q8IXP5 236 aa12.7□□□□□ -0.38
MKS1-202ENST00000393119 OR5AP2Q8NGF4 316 aa12.7□□□□□ -0.38
MKS1-202ENST00000393119 ARL6Q9H0F7 186 aa12.7□□□□□ -0.38
MKS1-202ENST00000393119 GPN1Q9HCN4 374 aaPredicted RBP12.7□□□□□ -0.38
MKS1-202ENST00000393119 TMEM100Q9NV29 134 aa12.7□□□□□ -0.38
MKS1-202ENST00000393119 CACNA1AO00555 2505 aa12.69□□□□□ -0.38
MKS1-202ENST00000393119 GOSR2O14653 212 aa12.69□□□□□ -0.38
MKS1-202ENST00000393119 FUT3P21217 361 aa12.69□□□□□ -0.38
MKS1-202ENST00000393119 DHRS2Q13268 280 aa12.69□□□□□ -0.38
MKS1-202ENST00000393119 SLC22A25Q6T423 547 aa12.69□□□□□ -0.38
MKS1-202ENST00000393119 UNQ6494/PRO21346Q6UXR6 183 aa12.69□□□□□ -0.38
MKS1-202ENST00000393119 ZNF573Q86YE8 665 aa12.69□□□□□ -0.38
MKS1-202ENST00000393119 WFDC8Q8IUA0 241 aa12.69□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 33.2 ms