RNA–Protein interactions for RNA: ENST00000392770.6

SCN3B-202, Transcript of sodium voltage-gated channel beta subunit 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SCN3B, Length 6,061 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN3B-202ENST00000392770 TRAV38-1A0A0B4J264 116 aa14.46□□□□□ -0.09
SCN3B-202ENST00000392770 PRSS44E7EML9 344 aa14.46□□□□□ -0.09
SCN3B-202ENST00000392770 CST4P01036 141 aa14.46□□□□□ -0.09
SCN3B-202ENST00000392770 OR11H7Q8NGC8 314 aa14.46□□□□□ -0.09
SCN3B-202ENST00000392770 RXFP4Q8TDU9 374 aa14.46□□□□□ -0.09
SCN3B-202ENST00000392770 C14orf79Q96F83 325 aa14.46□□□□□ -0.09
SCN3B-202ENST00000392770 SAMD10Q9BYL1 202 aa14.46□□□□□ -0.09
SCN3B-202ENST00000392770 MSL2Q9HCI7 577 aa14.46□□□□□ -0.09
SCN3B-202ENST00000392770 CTNNBIP1Q9NSA3 81 aaPredicted RBP14.46□□□□□ -0.09
SCN3B-202ENST00000392770 FAM206AQ9NX38 181 aa14.46□□□□□ -0.09
SCN3B-202ENST00000392770 CHCHD2Q9Y6H1 151 aaPredicted RBP14.46□□□□□ -0.09
SCN3B-202ENST00000392770 IGHV3OR15-7A0A075B7D8 119 aa14.46□□□□□ -0.1
SCN3B-202ENST00000392770 C16orf97H3BN30 126 aa14.46□□□□□ -0.1
SCN3B-202ENST00000392770 ISG15P05161 165 aa14.46□□□□□ -0.1
SCN3B-202ENST00000392770 HNF1AP20823 631 aa14.46□□□□□ -0.1
SCN3B-202ENST00000392770 RPL11P62913 178 aaKnown RBP14.46□□□□□ -0.1
SCN3B-202ENST00000392770 PRSS54Q6PEW0 395 aa14.46□□□□□ -0.1
SCN3B-202ENST00000392770 ZNF251Q9BRH9 671 aa14.46□□□□□ -0.1
SCN3B-202ENST00000392770 RNF7Q9UBF6 113 aa14.46□□□□□ -0.1
SCN3B-202ENST00000392770 NEUROG3Q9Y4Z2 214 aa14.46□□□□□ -0.1
SCN3B-202ENST00000392770 HRASP01112 189 aa14.45□□□□□ -0.1
SCN3B-202ENST00000392770 OR4D10Q8NGI6 311 aa14.45□□□□□ -0.1
SCN3B-202ENST00000392770 ZNF488Q96MN9 340 aa14.45□□□□□ -0.1
SCN3B-202ENST00000392770 AKIRIN1Q9H9L7 192 aaPredicted RBP14.45□□□□□ -0.1
SCN3B-202ENST00000392770 OSGIN2Q9Y236 505 aa14.45□□□□□ -0.1
SCN3B-202ENST00000392770 NCBP2LA6PVI3 153 aaKnown RBP14.45□□□□□ -0.1
SCN3B-202ENST00000392770 CXCL3P19876 107 aa14.45□□□□□ -0.1
SCN3B-202ENST00000392770 YIF1AO95070 293 aa14.45□□□□□ -0.1
SCN3B-202ENST00000392770 MT-ND4LP03901 98 aa14.45□□□□□ -0.1
SCN3B-202ENST00000392770 RBM11P57052 281 aaKnown RBP14.45□□□□□ -0.1
SCN3B-202ENST00000392770 UBE2G1P62253 170 aa14.45□□□□□ -0.1
SCN3B-202ENST00000392770 IFITM3Q01628 133 aa14.45□□□□□ -0.1
SCN3B-202ENST00000392770 FAM24AA6NFZ4 105 aa14.45□□□□□ -0.1
SCN3B-202ENST00000392770 GAPTQ8N292 157 aa14.45□□□□□ -0.1
SCN3B-202ENST00000392770 OR10Z1Q8NGY1 313 aa14.45□□□□□ -0.1
SCN3B-202ENST00000392770 RAB40CQ96S21 281 aa14.45□□□□□ -0.1
SCN3B-202ENST00000392770 GDF9O60383 454 aa14.45□□□□□ -0.1
SCN3B-202ENST00000392770 RRASP10301 218 aa14.45□□□□□ -0.1
SCN3B-202ENST00000392770 SNAI3Q3KNW1 292 aa14.45□□□□□ -0.1
SCN3B-202ENST00000392770 LINC01590Q5TEZ4 76 aa14.45□□□□□ -0.1
SCN3B-202ENST00000392770 CD200R1LQ6Q8B3 271 aa14.45□□□□□ -0.1
SCN3B-202ENST00000392770 ACY3Q96HD9 319 aa14.45□□□□□ -0.1
SCN3B-202ENST00000392770 NMES1Q9C002 83 aa14.45□□□□□ -0.1
SCN3B-202ENST00000392770 OR7C2O60412 319 aa14.44□□□□□ -0.1
SCN3B-202ENST00000392770 TMEM11P17152 192 aa14.44□□□□□ -0.1
SCN3B-202ENST00000392770 IL13RA2Q14627 380 aa14.44□□□□□ -0.1
SCN3B-202ENST00000392770 TMEM54Q969K7 222 aa14.44□□□□□ -0.1
SCN3B-202ENST00000392770 RPEQ96AT9 228 aa14.44□□□□□ -0.1
SCN3B-202ENST00000392770 SAP30LQ9HAJ7 183 aa14.44□□□□□ -0.1
SCN3B-202ENST00000392770 ZMIZ1Q9ULJ6 1067 aa14.44□□□□□ -0.1
SCN3B-202ENST00000392770 RAB19A4D1S5 217 aa14.44□□□□□ -0.1
SCN3B-202ENST00000392770 PRR33A8MZF0 331 aa14.44□□□□□ -0.1
SCN3B-202ENST00000392770 TPPP3Q9BW30 176 aa14.44□□□□□ -0.1
SCN3B-202ENST00000392770 PPP1R3EQ9H7J1 279 aa14.44□□□□□ -0.1
SCN3B-202ENST00000392770 TXNL1O43396 289 aa14.44□□□□□ -0.1
SCN3B-202ENST00000392770 COX7A1P24310 79 aa14.44□□□□□ -0.1
SCN3B-202ENST00000392770 HLA-DRB3P79483 266 aa14.44□□□□□ -0.1
SCN3B-202ENST00000392770 CSRP2Q16527 193 aa14.44□□□□□ -0.1
SCN3B-202ENST00000392770 CEACAM21Q3KPI0 293 aa14.44□□□□□ -0.1
SCN3B-202ENST00000392770 KRTCAP3Q53RY4 240 aa14.44□□□□□ -0.1
SCN3B-202ENST00000392770 SF3B6Q9Y3B4 125 aaKnown RBP14.44□□□□□ -0.1
SCN3B-202ENST00000392770 COX7A2P2O60397 106 aa14.44□□□□□ -0.1
SCN3B-202ENST00000392770 PPYP01298 95 aa14.44□□□□□ -0.1
SCN3B-202ENST00000392770 MS4A3Q96HJ5 214 aa14.44□□□□□ -0.1
SCN3B-202ENST00000392770 TRBV5-7A0A0A0MS05 114 aa14.44□□□□□ -0.1
SCN3B-202ENST00000392770 UCNP55089 124 aa14.44□□□□□ -0.1
SCN3B-202ENST00000392770 HOGA1Q86XE5 327 aa14.44□□□□□ -0.1
SCN3B-202ENST00000392770 OR5C1Q8NGR4 320 aa14.44□□□□□ -0.1
SCN3B-202ENST00000392770 G6PC2Q9NQR9 355 aa14.44□□□□□ -0.1
SCN3B-202ENST00000392770 VSIG4Q9Y279 399 aa14.44□□□□□ -0.1
SCN3B-202ENST00000392770 NINQ8N4C6 2090 aa14.43□□□□□ -0.1
SCN3B-202ENST00000392770 NPIPB9F8W1W9 429 aa14.43□□□□□ -0.1
SCN3B-202ENST00000392770 HPXP02790 462 aa14.43□□□□□ -0.1
SCN3B-202ENST00000392770 HOXD11P31277 338 aaPredicted RBP14.43□□□□□ -0.1
SCN3B-202ENST00000392770 UCP2P55851 309 aa14.43□□□□□ -0.1
SCN3B-202ENST00000392770 CLLU1Q5K131 121 aa14.43□□□□□ -0.1
SCN3B-202ENST00000392770 OR1K1Q8NGR3 316 aa14.43□□□□□ -0.1
SCN3B-202ENST00000392770 CCL28Q9NRJ3 127 aa14.43□□□□□ -0.1
SCN3B-202ENST00000392770 OR2C1O95371 312 aa14.43□□□□□ -0.1
SCN3B-202ENST00000392770 SLC38A11Q08AI6 406 aa14.43□□□□□ -0.1
SCN3B-202ENST00000392770 GABRA6Q16445 453 aa14.43□□□□□ -0.1
SCN3B-202ENST00000392770 RPUSD4Q96CM3 377 aaKnown RBP14.43□□□□□ -0.1
SCN3B-202ENST00000392770 RHOFQ9HBH0 211 aa14.43□□□□□ -0.1
SCN3B-202ENST00000392770 AHRRA9YTQ3 701 aa14.43□□□□□ -0.1
SCN3B-202ENST00000392770 CCL21O00585 134 aa14.43□□□□□ -0.1
SCN3B-202ENST00000392770 RAB4AP20338 218 aa14.43□□□□□ -0.1
SCN3B-202ENST00000392770 TRAF3IP2O43734 574 aaPredicted RBP14.43□□□□□ -0.1
SCN3B-202ENST00000392770 NPBWR1P48145 328 aa14.43□□□□□ -0.1
SCN3B-202ENST00000392770 MOGAT2Q3SYC2 334 aa14.43□□□□□ -0.1
SCN3B-202ENST00000392770 GAB2Q9UQC2 676 aa14.43□□□□□ -0.1
SCN3B-202ENST00000392770 CBR1P16152 277 aa14.42□□□□□ -0.1
SCN3B-202ENST00000392770 TRAV39A0A0B4J263 110 aa14.42□□□□□ -0.1
SCN3B-202ENST00000392770 HMSDA8MTL9 139 aa14.42□□□□□ -0.1
SCN3B-202ENST00000392770 FGF2P09038 288 aa14.42□□□□□ -0.1
SCN3B-202ENST00000392770 BTF3L4Q96K17 158 aa14.42□□□□□ -0.1
SCN3B-202ENST00000392770 ZNF727A8MUV8 499 aa14.42□□□□□ -0.1
SCN3B-202ENST00000392770 PRRX1P54821 245 aa14.42□□□□□ -0.1
SCN3B-202ENST00000392770 SSX2Q16385 188 aa14.42□□□□□ -0.1
SCN3B-202ENST00000392770 UQCC1Q9NVA1 299 aa14.42□□□□□ -0.1
SCN3B-202ENST00000392770 TMPRSS3P57727 454 aa14.42□□□□□ -0.1
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms